RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 RGPD5Q99666 1765 aa21.29■■□□□ 1
LINC01089-209ENST00000542933 CCDC9Q9Y3X0 531 aaKnown RBP21.29■■□□□ 1
LINC01089-209ENST00000542933 WASHC2AQ641Q2 1341 aa21.29■■□□□ 1
LINC01089-209ENST00000542933 STRN4Q9NRL3 753 aa21.27■■□□□ 1
LINC01089-209ENST00000542933 SPATA31A5Q5VU36 1347 aa21.27■□□□□ 0.99
LINC01089-209ENST00000542933 SPATA31A7Q8IWB4 1347 aa21.27■□□□□ 0.99
LINC01089-209ENST00000542933 EVA1CP58658 441 aa21.26■□□□□ 0.99
LINC01089-209ENST00000542933 NSD2O96028 1365 aa21.24■□□□□ 0.99
LINC01089-209ENST00000542933 SPATA31A1Q5TZJ5 1347 aa21.24■□□□□ 0.99
LINC01089-209ENST00000542933 CRB1P82279 1406 aa21.23■□□□□ 0.99
LINC01089-209ENST00000542933 AXIN2Q9Y2T1 843 aa21.23■□□□□ 0.99
LINC01089-209ENST00000542933 BLMP54132 1417 aaPredicted RBP21.22■□□□□ 0.99
LINC01089-209ENST00000542933 SOCS7O14512 581 aa21.22■□□□□ 0.99
LINC01089-209ENST00000542933 LARP1Q6PKG0 1096 aaKnown RBP21.22■□□□□ 0.99
LINC01089-209ENST00000542933 RTL1A6NKG5 1358 aa21.22■□□□□ 0.99
LINC01089-209ENST00000542933 THSD7AQ9UPZ6 1657 aa21.21■□□□□ 0.99
LINC01089-209ENST00000542933 KNSTRNQ9Y448 316 aa21.21■□□□□ 0.99
LINC01089-209ENST00000542933 MAP3K19Q56UN5 1328 aa21.21■□□□□ 0.99
LINC01089-209ENST00000542933 WDR17Q8IZU2 1322 aa21.21■□□□□ 0.99
LINC01089-209ENST00000542933 ONECUT3O60422 494 aaPredicted RBP21.2■□□□□ 0.98
LINC01089-209ENST00000542933 FAM208AQ9UK61 1670 aaKnown RBP21.2■□□□□ 0.98
LINC01089-209ENST00000542933 EP400Q96L91 3159 aa21.2■□□□□ 0.98
LINC01089-209ENST00000542933 BRWD3Q6RI45 1802 aa21.2■□□□□ 0.98
LINC01089-209ENST00000542933 ERBB3P21860 1342 aa21.19■□□□□ 0.98
LINC01089-209ENST00000542933 WNK3Q9BYP7 1800 aa21.18■□□□□ 0.98
LINC01089-209ENST00000542933 FAM98CQ17RN3 349 aaKnown RBP21.18■□□□□ 0.98
LINC01089-209ENST00000542933 IP6K1Q92551 441 aa21.18■□□□□ 0.98
LINC01089-209ENST00000542933 KIF24Q5T7B8 1368 aa21.18■□□□□ 0.98
LINC01089-209ENST00000542933 FBLN1P23142 703 aa21.17■□□□□ 0.98
LINC01089-209ENST00000542933 AMPHP49418 695 aa21.17■□□□□ 0.98
LINC01089-209ENST00000542933 RRS1Q15050 365 aaKnown RBP21.17■□□□□ 0.98
LINC01089-209ENST00000542933 TOM1L2Q6ZVM7 507 aa21.17■□□□□ 0.98
LINC01089-209ENST00000542933 SEPT12Q8IYM1 358 aa21.17■□□□□ 0.98
LINC01089-209ENST00000542933 USP35Q9P2H5 1018 aa21.17■□□□□ 0.98
LINC01089-209ENST00000542933 THRAP3Q9Y2W1 955 aaKnown RBP21.17■□□□□ 0.98
LINC01089-209ENST00000542933 MAP2P11137 1827 aaKnown RBP21.17■□□□□ 0.98
LINC01089-209ENST00000542933 PEAK1Q9H792 1746 aa21.16■□□□□ 0.98
LINC01089-209ENST00000542933 CSB-PGBD3P0DP91 1061 aa21.16■□□□□ 0.98
LINC01089-209ENST00000542933 HOXC9P31274 260 aa21.16■□□□□ 0.98
LINC01089-209ENST00000542933 BARGINQ6ZT62 677 aa21.16■□□□□ 0.98
LINC01089-209ENST00000542933 TCP11L2Q8N4U5 519 aa21.16■□□□□ 0.98
LINC01089-209ENST00000542933 A0A0G2JS52 829 aa21.15■□□□□ 0.98
LINC01089-209ENST00000542933 MYT1Q01538 1121 aa21.15■□□□□ 0.98
LINC01089-209ENST00000542933 PARP4Q9UKK3 1724 aaKnown RBP21.15■□□□□ 0.98
LINC01089-209ENST00000542933 FLT4P35916 1363 aa21.14■□□□□ 0.98
LINC01089-209ENST00000542933 PER1O15534 1290 aaPredicted RBP21.14■□□□□ 0.97
LINC01089-209ENST00000542933 AMER1Q5JTC6 1135 aaPredicted RBP21.14■□□□□ 0.97
LINC01089-209ENST00000542933 ANKRD24Q8TF21 1146 aa21.14■□□□□ 0.97
LINC01089-209ENST00000542933 CARD10Q9BWT7 1032 aa21.13■□□□□ 0.97
LINC01089-209ENST00000542933 NPC1L1Q9UHC9 1359 aa21.11■□□□□ 0.97
LINC01089-209ENST00000542933 SMG6Q86US8 1419 aaKnown RBP21.11■□□□□ 0.97
LINC01089-209ENST00000542933 INSRP06213 1382 aa21.1■□□□□ 0.97
LINC01089-209ENST00000542933 MORC1Q86VD1 984 aa21.1■□□□□ 0.97
LINC01089-209ENST00000542933 EMILIN1Q9Y6C2 1016 aa21.1■□□□□ 0.97
LINC01089-209ENST00000542933 LRRC37A3O60309 1634 aa21.1■□□□□ 0.97
LINC01089-209ENST00000542933 KRT27Q7Z3Y8 459 aa21.09■□□□□ 0.97
LINC01089-209ENST00000542933 NLRP2Q9NX02 1062 aa21.09■□□□□ 0.97
LINC01089-209ENST00000542933 RGPD2P0DJD1 1756 aa21.08■□□□□ 0.97
LINC01089-209ENST00000542933 TNNT2P45379 298 aaPredicted RBP21.08■□□□□ 0.97
LINC01089-209ENST00000542933 DISP2A7MBM2 1401 aa21.07■□□□□ 0.96
LINC01089-209ENST00000542933 LTV1Q96GA3 475 aaPredicted RBP21.07■□□□□ 0.96
LINC01089-209ENST00000542933 CDCA7Q9BWT1 371 aaPredicted RBP21.07■□□□□ 0.96
LINC01089-209ENST00000542933 POLKQ9UBT6 870 aa21.07■□□□□ 0.96
LINC01089-209ENST00000542933 PPM1GO15355 546 aaPredicted RBP21.06■□□□□ 0.96
LINC01089-209ENST00000542933 HSP90AB2PQ58FF8 381 aa21.06■□□□□ 0.96
LINC01089-209ENST00000542933 CC2D1BQ5T0F9 858 aaKnown RBP21.04■□□□□ 0.96
LINC01089-209ENST00000542933 UPF1Q92900 1129 aaKnown RBP eCLIP21.02■□□□□ 0.96
LINC01089-209ENST00000542933 PDE3BQ13370 1112 aa21.01■□□□□ 0.95
LINC01089-209ENST00000542933 DDB1Q16531 1140 aa21.01■□□□□ 0.95
LINC01089-209ENST00000542933 TNS2Q63HR2 1409 aa21.01■□□□□ 0.95
LINC01089-209ENST00000542933 IL2RBP14784 551 aa21■□□□□ 0.95
LINC01089-209ENST00000542933 NBPF6Q5VWK0 638 aa20.98■□□□□ 0.95
LINC01089-209ENST00000542933 NBPF4Q96M43 638 aa20.98■□□□□ 0.95
LINC01089-209ENST00000542933 OVOS2A0A0G2JMS6 1433 aa20.97■□□□□ 0.95
LINC01089-209ENST00000542933 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
LINC01089-209ENST00000542933 RGPD1P0DJD0 1748 aa20.96■□□□□ 0.95
LINC01089-209ENST00000542933 MEGF6O75095 1541 aa20.95■□□□□ 0.94
LINC01089-209ENST00000542933 EXOC5O00471 708 aa20.95■□□□□ 0.94
LINC01089-209ENST00000542933 CNGB1Q14028 1251 aaPredicted RBP20.95■□□□□ 0.94
LINC01089-209ENST00000542933 EIF4A2Q14240 407 aaKnown RBP20.95■□□□□ 0.94
LINC01089-209ENST00000542933 FAM182BQ5T319 152 aa20.95■□□□□ 0.94
LINC01089-209ENST00000542933 FAM196AQ6ZSG2 479 aa20.95■□□□□ 0.94
LINC01089-209ENST00000542933 CCDC125Q86Z20 511 aa20.95■□□□□ 0.94
LINC01089-209ENST00000542933 USHBP1Q8N6Y0 703 aa20.94■□□□□ 0.94
LINC01089-209ENST00000542933 MTHFSP49914 203 aa20.93■□□□□ 0.94
LINC01089-209ENST00000542933 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
LINC01089-209ENST00000542933 SHANK3Q9BYB0 1731 aa20.92■□□□□ 0.94
LINC01089-209ENST00000542933 TNS1Q9HBL0 1735 aaKnown RBP20.92■□□□□ 0.94
LINC01089-209ENST00000542933 RAPGEF4Q8WZA2 1011 aa20.92■□□□□ 0.94
LINC01089-209ENST00000542933 SBF2Q86WG5 1849 aa20.92■□□□□ 0.94
LINC01089-209ENST00000542933 BCL9O00512 1426 aa20.91■□□□□ 0.94
LINC01089-209ENST00000542933 EYA1Q99502 592 aa20.91■□□□□ 0.94
LINC01089-209ENST00000542933 PKD1L3Q7Z443 1732 aa20.9■□□□□ 0.94
LINC01089-209ENST00000542933 IGSF1Q8N6C5 1336 aa20.9■□□□□ 0.94
LINC01089-209ENST00000542933 MARCH10Q8NA82 808 aaPredicted RBP20.9■□□□□ 0.94
LINC01089-209ENST00000542933 ZNF316A6NFI3 1004 aaPredicted RBP20.89■□□□□ 0.93
LINC01089-209ENST00000542933 TATP17735 454 aaPredicted RBP20.89■□□□□ 0.93
LINC01089-209ENST00000542933 SF3B2Q13435 895 aaKnown RBP20.89■□□□□ 0.93
LINC01089-209ENST00000542933 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
LINC01089-209ENST00000542933 PARD3Q8TEW0 1356 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms