RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 GPSM3Q9Y4H4 160 aa6.05□□□□□ -1.44
KNTC1-213ENST00000542727 BMP2P12643 396 aa6.04□□□□□ -1.44
KNTC1-213ENST00000542727 GMPRP36959 345 aa6.04□□□□□ -1.44
KNTC1-213ENST00000542727 CARD14Q9BXL6 1004 aa6.04□□□□□ -1.44
KNTC1-213ENST00000542727 PTK2Q05397 1052 aa6.03□□□□□ -1.44
KNTC1-213ENST00000542727 C6orf118Q5T5N4 469 aa6.03□□□□□ -1.44
KNTC1-213ENST00000542727 ZBTB33Q86T24 672 aa6.03□□□□□ -1.44
KNTC1-213ENST00000542727 ZSCAN1Q8NBB4 408 aa6.03□□□□□ -1.44
KNTC1-213ENST00000542727 TRIM52Q96A61 297 aa6.03□□□□□ -1.44
KNTC1-213ENST00000542727 SOS2Q07890 1332 aaPredicted RBP6.02□□□□□ -1.45
KNTC1-213ENST00000542727 ATP1B4Q9UN42 357 aaPredicted RBP6.02□□□□□ -1.45
KNTC1-213ENST00000542727 VEGFBP49765 207 aa6.01□□□□□ -1.45
KNTC1-213ENST00000542727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.01□□□□□ -1.45
KNTC1-213ENST00000542727 NBPF20Q3BBV1 942 aa6.01□□□□□ -1.45
KNTC1-213ENST00000542727 Q6ZVU0 165 aa6.01□□□□□ -1.45
KNTC1-213ENST00000542727 LRRN4Q8WUT4 740 aa6.01□□□□□ -1.45
KNTC1-213ENST00000542727 KCTD15Q96SI1 283 aaPredicted RBP6.01□□□□□ -1.45
KNTC1-213ENST00000542727 ERBB4Q15303 1308 aa6□□□□□ -1.45
KNTC1-213ENST00000542727 PPP1R26Q5T8A7 1209 aaPredicted RBP6□□□□□ -1.45
KNTC1-213ENST00000542727 FAM117AQ9C073 453 aa6□□□□□ -1.45
KNTC1-213ENST00000542727 GPBP1L1Q9HC44 474 aaPredicted RBP6□□□□□ -1.45
KNTC1-213ENST00000542727 GOPCQ9HD26 462 aa6□□□□□ -1.45
KNTC1-213ENST00000542727 SOBPA7XYQ1 873 aa5.99□□□□□ -1.45
KNTC1-213ENST00000542727 AP1G2O75843 785 aa5.99□□□□□ -1.45
KNTC1-213ENST00000542727 NR6A1Q15406 480 aa5.99□□□□□ -1.45
KNTC1-213ENST00000542727 DNMT3LQ9UJW3 386 aa5.99□□□□□ -1.45
KNTC1-213ENST00000542727 TTLL8A6PVC2 850 aa5.98□□□□□ -1.45
KNTC1-213ENST00000542727 SPINT1O43278 529 aa5.98□□□□□ -1.45
KNTC1-213ENST00000542727 PPFIA3O75145 1194 aa5.98□□□□□ -1.45
KNTC1-213ENST00000542727 USP17L8P0C7I0 530 aa5.98□□□□□ -1.45
KNTC1-213ENST00000542727 PROCA1Q8NCQ7 364 aaPredicted RBP5.98□□□□□ -1.45
KNTC1-213ENST00000542727 LORP23490 312 aaPredicted RBP5.97□□□□□ -1.45
KNTC1-213ENST00000542727 ADAM32Q8TC27 787 aa5.97□□□□□ -1.45
KNTC1-213ENST00000542727 RFC5P40937 340 aa5.96□□□□□ -1.46
KNTC1-213ENST00000542727 INTS6LQ5JSJ4 861 aaKnown RBP5.96□□□□□ -1.46
KNTC1-213ENST00000542727 SEPT12Q8IYM1 358 aa5.96□□□□□ -1.46
KNTC1-213ENST00000542727 TMEM259Q4ZIN3 620 aa5.95□□□□□ -1.46
KNTC1-213ENST00000542727 FBXO31Q5XUX0 539 aaPredicted RBP5.95□□□□□ -1.46
KNTC1-213ENST00000542727 CCDC125Q86Z20 511 aa5.95□□□□□ -1.46
KNTC1-213ENST00000542727 PCMTD1Q96MG8 357 aaPredicted RBP5.95□□□□□ -1.46
KNTC1-213ENST00000542727 OCSTAMPQ9BR26 566 aa5.95□□□□□ -1.46
KNTC1-213ENST00000542727 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
KNTC1-213ENST00000542727 PTSQ03393 145 aa5.94□□□□□ -1.46
KNTC1-213ENST00000542727 CBLBQ13191 982 aa5.94□□□□□ -1.46
KNTC1-213ENST00000542727 DZIP3Q86Y13 1208 aaKnown RBP5.94□□□□□ -1.46
KNTC1-213ENST00000542727 NANOS1Q8WY41 292 aaKnown RBP5.94□□□□□ -1.46
KNTC1-213ENST00000542727 ZNF592Q92610 1267 aa5.94□□□□□ -1.46
KNTC1-213ENST00000542727 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
KNTC1-213ENST00000542727 HMX1Q9NP08 348 aaPredicted RBP5.93□□□□□ -1.46
KNTC1-213ENST00000542727 ESPNB1AK53 854 aa5.92□□□□□ -1.46
KNTC1-213ENST00000542727 ADH1AP07327 375 aa5.92□□□□□ -1.46
KNTC1-213ENST00000542727 CCDC155Q8N6L0 562 aa5.92□□□□□ -1.46
KNTC1-213ENST00000542727 SLC35F4A4IF30 521 aa5.91□□□□□ -1.46
KNTC1-213ENST00000542727 SOCS7O14512 581 aa5.91□□□□□ -1.46
KNTC1-213ENST00000542727 SLC24A1O60721 1099 aa5.91□□□□□ -1.46
KNTC1-213ENST00000542727 MCCD1P59942 119 aaPredicted RBP5.91□□□□□ -1.46
KNTC1-213ENST00000542727 ZNF784Q8NCA9 323 aaPredicted RBP5.91□□□□□ -1.46
KNTC1-213ENST00000542727 EPS8L1Q8TE68 723 aa5.91□□□□□ -1.46
KNTC1-213ENST00000542727 FIGNL2A6NMB9 653 aa5.9□□□□□ -1.46
KNTC1-213ENST00000542727 ZBBXA8MT70 800 aa5.9□□□□□ -1.46
KNTC1-213ENST00000542727 RELBQ01201 579 aa5.9□□□□□ -1.46
KNTC1-213ENST00000542727 RNF217Q8TC41 542 aa5.9□□□□□ -1.46
KNTC1-213ENST00000542727 POLMQ9NP87 494 aaPredicted RBP5.9□□□□□ -1.46
KNTC1-213ENST00000542727 RNF225M0QZC1 329 aaPredicted RBP5.89□□□□□ -1.47
KNTC1-213ENST00000542727 ERVH48-1M5A8F1 160 aa5.89□□□□□ -1.47
KNTC1-213ENST00000542727 APBB1O00213 710 aa5.89□□□□□ -1.47
KNTC1-213ENST00000542727 ITGA6P23229 1130 aa5.89□□□□□ -1.47
KNTC1-213ENST00000542727 CTSOP43234 321 aaPredicted RBP5.89□□□□□ -1.47
KNTC1-213ENST00000542727 RNF20Q5VTR2 975 aa5.89□□□□□ -1.47
KNTC1-213ENST00000542727 AGBL1Q96MI9 1066 aa5.89□□□□□ -1.47
KNTC1-213ENST00000542727 INSM2Q96T92 566 aaPredicted RBP5.89□□□□□ -1.47
KNTC1-213ENST00000542727 TRIM34Q9BYJ4 488 aa5.89□□□□□ -1.47
KNTC1-213ENST00000542727 TMPRSS4Q9NRS4 437 aa5.89□□□□□ -1.47
KNTC1-213ENST00000542727 ZNF330Q9Y3S2 320 aaPredicted RBP5.89□□□□□ -1.47
KNTC1-213ENST00000542727 LILRA1O75019 489 aa5.88□□□□□ -1.47
KNTC1-213ENST00000542727 PTGIRP43119 386 aa5.88□□□□□ -1.47
KNTC1-213ENST00000542727 NEUROD2Q15784 382 aa5.88□□□□□ -1.47
KNTC1-213ENST00000542727 GPC1P35052 558 aa5.87□□□□□ -1.47
KNTC1-213ENST00000542727 RAB15P59190 212 aa5.87□□□□□ -1.47
KNTC1-213ENST00000542727 SV2AQ7L0J3 742 aa5.87□□□□□ -1.47
KNTC1-213ENST00000542727 LYSMD3Q7Z3D4 306 aa5.87□□□□□ -1.47
KNTC1-213ENST00000542727 BANK1Q8NDB2 785 aa5.87□□□□□ -1.47
KNTC1-213ENST00000542727 GMCL1Q96IK5 515 aa5.87□□□□□ -1.47
KNTC1-213ENST00000542727 ATP5J2-PTCD1G3V325 749 aa5.86□□□□□ -1.47
KNTC1-213ENST00000542727 RNF144AP50876 292 aaPredicted RBP5.86□□□□□ -1.47
KNTC1-213ENST00000542727 KRT76Q01546 638 aa5.86□□□□□ -1.47
KNTC1-213ENST00000542727 KCNMA1Q12791 1236 aa5.86□□□□□ -1.47
KNTC1-213ENST00000542727 FOXD4L5Q5VV16 416 aaPredicted RBP5.86□□□□□ -1.47
KNTC1-213ENST00000542727 GJD4Q96KN9 370 aaPredicted RBP5.86□□□□□ -1.47
KNTC1-213ENST00000542727 CNTNAP3BQ96NU0 1288 aa5.86□□□□□ -1.47
KNTC1-213ENST00000542727 COL25A1Q9BXS0 654 aaPredicted RBP5.86□□□□□ -1.47
KNTC1-213ENST00000542727 CNTNAP3Q9BZ76 1288 aa5.86□□□□□ -1.47
KNTC1-213ENST00000542727 ZNF395Q9H8N7 513 aaPredicted RBP5.86□□□□□ -1.47
KNTC1-213ENST00000542727 SLURP2P0DP57 97 aa5.85□□□□□ -1.47
KNTC1-213ENST00000542727 ADD1P35611 737 aaKnown RBP5.85□□□□□ -1.47
KNTC1-213ENST00000542727 GPR161Q8N6U8 529 aaKnown RBP5.85□□□□□ -1.47
KNTC1-213ENST00000542727 PCDHB9Q9Y5E1 797 aa5.85□□□□□ -1.47
KNTC1-213ENST00000542727 SENP3-EIF4A1A0A087X0R7 540 aa5.84□□□□□ -1.47
KNTC1-213ENST00000542727 CDC14CA4D256 554 aa5.84□□□□□ -1.47
KNTC1-213ENST00000542727 FBXO45P0C2W1 286 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms