RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 SPATA31A5Q5VU36 1347 aa19.47■□□□□ 0.71
DDX11-221ENST00000542661 SPATA31A7Q8IWB4 1347 aa19.47■□□□□ 0.71
DDX11-221ENST00000542661 COL18A1P39060 1754 aa19.47■□□□□ 0.71
DDX11-221ENST00000542661 COL5A2P05997 1499 aaPredicted RBP19.46■□□□□ 0.71
DDX11-221ENST00000542661 NSD2O96028 1365 aa19.45■□□□□ 0.7
DDX11-221ENST00000542661 GLI3P10071 1580 aa19.45■□□□□ 0.7
DDX11-221ENST00000542661 LTN1O94822 1766 aa19.45■□□□□ 0.7
DDX11-221ENST00000542661 AXIN2Q9Y2T1 843 aa19.44■□□□□ 0.7
DDX11-221ENST00000542661 RGS12O14924 1447 aa19.43■□□□□ 0.7
DDX11-221ENST00000542661 ONECUT3O60422 494 aaPredicted RBP19.43■□□□□ 0.7
DDX11-221ENST00000542661 SPATA31A1Q5TZJ5 1347 aa19.43■□□□□ 0.7
DDX11-221ENST00000542661 LARP1Q6PKG0 1096 aaKnown RBP19.42■□□□□ 0.7
DDX11-221ENST00000542661 IP6K1Q92551 441 aa19.42■□□□□ 0.7
DDX11-221ENST00000542661 AMPHP49418 695 aa19.41■□□□□ 0.7
DDX11-221ENST00000542661 ANKRD26Q9UPS8 1709 aa19.41■□□□□ 0.7
DDX11-221ENST00000542661 MAP3K19Q56UN5 1328 aa19.41■□□□□ 0.7
DDX11-221ENST00000542661 WDR17Q8IZU2 1322 aa19.41■□□□□ 0.7
DDX11-221ENST00000542661 BLMP54132 1417 aaPredicted RBP19.41■□□□□ 0.7
DDX11-221ENST00000542661 CRB1P82279 1406 aa19.41■□□□□ 0.7
DDX11-221ENST00000542661 CSB-PGBD3P0DP91 1061 aa19.4■□□□□ 0.7
DDX11-221ENST00000542661 THRAP3Q9Y2W1 955 aaKnown RBP19.4■□□□□ 0.7
DDX11-221ENST00000542661 RTL1A6NKG5 1358 aa19.4■□□□□ 0.7
DDX11-221ENST00000542661 RGPD5Q99666 1765 aa19.39■□□□□ 0.7
DDX11-221ENST00000542661 FAM98CQ17RN3 349 aaKnown RBP19.39■□□□□ 0.69
DDX11-221ENST00000542661 TOM1L2Q6ZVM7 507 aa19.39■□□□□ 0.69
DDX11-221ENST00000542661 TCP11L2Q8N4U5 519 aa19.39■□□□□ 0.69
DDX11-221ENST00000542661 KIF24Q5T7B8 1368 aa19.39■□□□□ 0.69
DDX11-221ENST00000542661 PER1O15534 1290 aaPredicted RBP19.38■□□□□ 0.69
DDX11-221ENST00000542661 FBLN1P23142 703 aa19.38■□□□□ 0.69
DDX11-221ENST00000542661 RRS1Q15050 365 aaKnown RBP19.38■□□□□ 0.69
DDX11-221ENST00000542661 AMER1Q5JTC6 1135 aaPredicted RBP19.38■□□□□ 0.69
DDX11-221ENST00000542661 BARGINQ6ZT62 677 aa19.38■□□□□ 0.69
DDX11-221ENST00000542661 SEPT12Q8IYM1 358 aa19.38■□□□□ 0.69
DDX11-221ENST00000542661 USP35Q9P2H5 1018 aa19.38■□□□□ 0.69
DDX11-221ENST00000542661 ERBB3P21860 1342 aa19.37■□□□□ 0.69
DDX11-221ENST00000542661 A0A0G2JS52 829 aa19.37■□□□□ 0.69
DDX11-221ENST00000542661 HOXC9P31274 260 aa19.37■□□□□ 0.69
DDX11-221ENST00000542661 MYT1Q01538 1121 aa19.37■□□□□ 0.69
DDX11-221ENST00000542661 MORC1Q86VD1 984 aa19.37■□□□□ 0.69
DDX11-221ENST00000542661 CARD10Q9BWT7 1032 aa19.37■□□□□ 0.69
DDX11-221ENST00000542661 ANKRD24Q8TF21 1146 aa19.36■□□□□ 0.69
DDX11-221ENST00000542661 FLT4P35916 1363 aa19.34■□□□□ 0.69
DDX11-221ENST00000542661 NPC1L1Q9UHC9 1359 aa19.34■□□□□ 0.69
DDX11-221ENST00000542661 TNNT2P45379 298 aaPredicted RBP19.33■□□□□ 0.68
DDX11-221ENST00000542661 CDCA7Q9BWT1 371 aaPredicted RBP19.33■□□□□ 0.68
DDX11-221ENST00000542661 NLRP2Q9NX02 1062 aa19.33■□□□□ 0.68
DDX11-221ENST00000542661 THSD7AQ9UPZ6 1657 aa19.33■□□□□ 0.68
DDX11-221ENST00000542661 INSRP06213 1382 aa19.32■□□□□ 0.68
DDX11-221ENST00000542661 MAP2P11137 1827 aaKnown RBP19.32■□□□□ 0.68
DDX11-221ENST00000542661 EMILIN1Q9Y6C2 1016 aa19.32■□□□□ 0.68
DDX11-221ENST00000542661 FAM208AQ9UK61 1670 aaKnown RBP19.32■□□□□ 0.68
DDX11-221ENST00000542661 SMG6Q86US8 1419 aaKnown RBP19.32■□□□□ 0.68
DDX11-221ENST00000542661 KRT27Q7Z3Y8 459 aa19.31■□□□□ 0.68
DDX11-221ENST00000542661 LTV1Q96GA3 475 aaPredicted RBP19.31■□□□□ 0.68
DDX11-221ENST00000542661 POLKQ9UBT6 870 aa19.31■□□□□ 0.68
DDX11-221ENST00000542661 BRWD3Q6RI45 1802 aa19.3■□□□□ 0.68
DDX11-221ENST00000542661 PPM1GO15355 546 aaPredicted RBP19.3■□□□□ 0.68
DDX11-221ENST00000542661 EP400Q96L91 3159 aa19.3■□□□□ 0.68
DDX11-221ENST00000542661 PEAK1Q9H792 1746 aa19.29■□□□□ 0.68
DDX11-221ENST00000542661 HSP90AB2PQ58FF8 381 aa19.29■□□□□ 0.68
DDX11-221ENST00000542661 CC2D1BQ5T0F9 858 aaKnown RBP19.29■□□□□ 0.68
DDX11-221ENST00000542661 PDE3BQ13370 1112 aa19.27■□□□□ 0.68
DDX11-221ENST00000542661 PARP4Q9UKK3 1724 aaKnown RBP19.26■□□□□ 0.67
DDX11-221ENST00000542661 UPF1Q92900 1129 aaKnown RBP eCLIP19.26■□□□□ 0.67
DDX11-221ENST00000542661 WNK3Q9BYP7 1800 aa19.25■□□□□ 0.67
DDX11-221ENST00000542661 DISP2A7MBM2 1401 aa19.25■□□□□ 0.67
DDX11-221ENST00000542661 DDB1Q16531 1140 aa19.24■□□□□ 0.67
DDX11-221ENST00000542661 IL2RBP14784 551 aa19.23■□□□□ 0.67
DDX11-221ENST00000542661 EXOC5O00471 708 aa19.22■□□□□ 0.67
DDX11-221ENST00000542661 NBPF6Q5VWK0 638 aa19.22■□□□□ 0.67
DDX11-221ENST00000542661 CCDC125Q86Z20 511 aa19.22■□□□□ 0.67
DDX11-221ENST00000542661 NBPF4Q96M43 638 aa19.22■□□□□ 0.67
DDX11-221ENST00000542661 DDX10Q13206 875 aaKnown RBP19.21■□□□□ 0.67
DDX11-221ENST00000542661 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
DDX11-221ENST00000542661 FAM196AQ6ZSG2 479 aa19.2■□□□□ 0.66
DDX11-221ENST00000542661 LRRC37A3O60309 1634 aa19.2■□□□□ 0.66
DDX11-221ENST00000542661 RGPD2P0DJD1 1756 aa19.19■□□□□ 0.66
DDX11-221ENST00000542661 MTHFSP49914 203 aa19.19■□□□□ 0.66
DDX11-221ENST00000542661 EIF4A2Q14240 407 aaKnown RBP19.19■□□□□ 0.66
DDX11-221ENST00000542661 RAPGEF4Q8WZA2 1011 aa19.18■□□□□ 0.66
DDX11-221ENST00000542661 TNS2Q63HR2 1409 aa19.17■□□□□ 0.66
DDX11-221ENST00000542661 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
DDX11-221ENST00000542661 FAM182BQ5T319 152 aa19.16■□□□□ 0.66
DDX11-221ENST00000542661 USHBP1Q8N6Y0 703 aa19.16■□□□□ 0.66
DDX11-221ENST00000542661 EYA1Q99502 592 aa19.16■□□□□ 0.66
DDX11-221ENST00000542661 OVOS2A0A0G2JMS6 1433 aa19.16■□□□□ 0.66
DDX11-221ENST00000542661 NCAPD2Q15021 1401 aa19.16■□□□□ 0.66
DDX11-221ENST00000542661 TATP17735 454 aaPredicted RBP19.15■□□□□ 0.66
DDX11-221ENST00000542661 SF3B2Q13435 895 aaKnown RBP19.14■□□□□ 0.65
DDX11-221ENST00000542661 MARCH10Q8NA82 808 aaPredicted RBP19.14■□□□□ 0.65
DDX11-221ENST00000542661 ZCRB1Q8TBF4 217 aaKnown RBP19.13■□□□□ 0.65
DDX11-221ENST00000542661 MEGF6O75095 1541 aa19.12■□□□□ 0.65
DDX11-221ENST00000542661 BCL9O00512 1426 aa19.12■□□□□ 0.65
DDX11-221ENST00000542661 IGSF1Q8N6C5 1336 aa19.12■□□□□ 0.65
DDX11-221ENST00000542661 CFAP53Q96M91 514 aa19.12■□□□□ 0.65
DDX11-221ENST00000542661 PARD3Q8TEW0 1356 aa19.11■□□□□ 0.65
DDX11-221ENST00000542661 PLEKHG2Q9H7P9 1386 aa19.11■□□□□ 0.65
DDX11-221ENST00000542661 DIAPH1O60610 1272 aaKnown RBP19.11■□□□□ 0.65
DDX11-221ENST00000542661 PPP2R1AP30153 589 aa19.11■□□□□ 0.65
DDX11-221ENST00000542661 IL13P35225 146 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms