RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 ZBTB7CA1YPR0 619 aa29.59■■■□□ 2.33
LINC00943-207ENST00000541359 ZEB1P37275 1124 aaPredicted RBP29.58■■■□□ 2.33
LINC00943-207ENST00000541359 CGNL1Q0VF96 1302 aa29.58■■■□□ 2.33
LINC00943-207ENST00000541359 SPATA31A5Q5VU36 1347 aa29.57■■■□□ 2.32
LINC00943-207ENST00000541359 SPATA31A7Q8IWB4 1347 aa29.57■■■□□ 2.32
LINC00943-207ENST00000541359 FBLN1P23142 703 aa29.56■■■□□ 2.32
LINC00943-207ENST00000541359 STRN4Q9NRL3 753 aa29.56■■■□□ 2.32
LINC00943-207ENST00000541359 LARP1Q6PKG0 1096 aaKnown RBP29.54■■■□□ 2.32
LINC00943-207ENST00000541359 MAP3K19Q56UN5 1328 aa29.52■■■□□ 2.32
LINC00943-207ENST00000541359 SPATA31A1Q5TZJ5 1347 aa29.52■■■□□ 2.32
LINC00943-207ENST00000541359 CCDC9Q9Y3X0 531 aaKnown RBP29.52■■■□□ 2.32
LINC00943-207ENST00000541359 THSD7AQ9UPZ6 1657 aa29.51■■■□□ 2.31
LINC00943-207ENST00000541359 PER1O15534 1290 aaPredicted RBP29.51■■■□□ 2.31
LINC00943-207ENST00000541359 ONECUT3O60422 494 aaPredicted RBP29.51■■■□□ 2.31
LINC00943-207ENST00000541359 EVA1CP58658 441 aa29.5■■■□□ 2.31
LINC00943-207ENST00000541359 PEAK1Q9H792 1746 aa29.5■■■□□ 2.31
LINC00943-207ENST00000541359 CRB1P82279 1406 aa29.49■■■□□ 2.31
LINC00943-207ENST00000541359 NSD2O96028 1365 aa29.49■■■□□ 2.31
LINC00943-207ENST00000541359 BRWD3Q6RI45 1802 aa29.48■■■□□ 2.31
LINC00943-207ENST00000541359 WDR17Q8IZU2 1322 aa29.47■■■□□ 2.31
LINC00943-207ENST00000541359 BLMP54132 1417 aaPredicted RBP29.47■■■□□ 2.31
LINC00943-207ENST00000541359 RRS1Q15050 365 aaKnown RBP29.47■■■□□ 2.31
LINC00943-207ENST00000541359 AMER1Q5JTC6 1135 aaPredicted RBP29.47■■■□□ 2.31
LINC00943-207ENST00000541359 SOCS7O14512 581 aa29.46■■■□□ 2.31
LINC00943-207ENST00000541359 IP6K1Q92551 441 aa29.46■■■□□ 2.31
LINC00943-207ENST00000541359 RTL1A6NKG5 1358 aa29.45■■■□□ 2.31
LINC00943-207ENST00000541359 FAM98CQ17RN3 349 aaKnown RBP29.45■■■□□ 2.31
LINC00943-207ENST00000541359 KNSTRNQ9Y448 316 aa29.45■■■□□ 2.31
LINC00943-207ENST00000541359 ERBB3P21860 1342 aa29.45■■■□□ 2.3
LINC00943-207ENST00000541359 HOXC9P31274 260 aa29.44■■■□□ 2.3
LINC00943-207ENST00000541359 SEPT12Q8IYM1 358 aa29.43■■■□□ 2.3
LINC00943-207ENST00000541359 WNK3Q9BYP7 1800 aa29.43■■■□□ 2.3
LINC00943-207ENST00000541359 MAP2P11137 1827 aaKnown RBP29.42■■■□□ 2.3
LINC00943-207ENST00000541359 BARGINQ6ZT62 677 aa29.41■■■□□ 2.3
LINC00943-207ENST00000541359 USP35Q9P2H5 1018 aa29.41■■■□□ 2.3
LINC00943-207ENST00000541359 KIF24Q5T7B8 1368 aa29.4■■■□□ 2.3
LINC00943-207ENST00000541359 TCP11L2Q8N4U5 519 aa29.4■■■□□ 2.3
LINC00943-207ENST00000541359 FAM208AQ9UK61 1670 aaKnown RBP29.4■■■□□ 2.3
LINC00943-207ENST00000541359 AMPHP49418 695 aa29.39■■■□□ 2.3
LINC00943-207ENST00000541359 TOM1L2Q6ZVM7 507 aa29.39■■■□□ 2.3
LINC00943-207ENST00000541359 ANKRD24Q8TF21 1146 aa29.39■■■□□ 2.3
LINC00943-207ENST00000541359 EMILIN1Q9Y6C2 1016 aa29.39■■■□□ 2.3
LINC00943-207ENST00000541359 THRAP3Q9Y2W1 955 aaKnown RBP29.38■■■□□ 2.29
LINC00943-207ENST00000541359 CARD10Q9BWT7 1032 aa29.37■■■□□ 2.29
LINC00943-207ENST00000541359 FLT4P35916 1363 aa29.37■■■□□ 2.29
LINC00943-207ENST00000541359 NPC1L1Q9UHC9 1359 aa29.37■■■□□ 2.29
LINC00943-207ENST00000541359 PARP4Q9UKK3 1724 aaKnown RBP29.37■■■□□ 2.29
LINC00943-207ENST00000541359 CSB-PGBD3P0DP91 1061 aa29.36■■■□□ 2.29
LINC00943-207ENST00000541359 POLKQ9UBT6 870 aa29.36■■■□□ 2.29
LINC00943-207ENST00000541359 SMG6Q86US8 1419 aaKnown RBP29.36■■■□□ 2.29
LINC00943-207ENST00000541359 RGPD2P0DJD1 1756 aa29.35■■■□□ 2.29
LINC00943-207ENST00000541359 INSRP06213 1382 aa29.35■■■□□ 2.29
LINC00943-207ENST00000541359 DISP2A7MBM2 1401 aa29.35■■■□□ 2.29
LINC00943-207ENST00000541359 TNNT2P45379 298 aaPredicted RBP29.34■■■□□ 2.29
LINC00943-207ENST00000541359 HSP90AB2PQ58FF8 381 aa29.33■■■□□ 2.29
LINC00943-207ENST00000541359 MORC1Q86VD1 984 aa29.33■■■□□ 2.29
LINC00943-207ENST00000541359 LRRC37A3O60309 1634 aa29.33■■■□□ 2.29
LINC00943-207ENST00000541359 LTV1Q96GA3 475 aaPredicted RBP29.31■■■□□ 2.28
LINC00943-207ENST00000541359 A0A0G2JS52 829 aa29.29■■■□□ 2.28
LINC00943-207ENST00000541359 MYT1Q01538 1121 aa29.29■■■□□ 2.28
LINC00943-207ENST00000541359 NLRP2Q9NX02 1062 aa29.29■■■□□ 2.28
LINC00943-207ENST00000541359 CC2D1BQ5T0F9 858 aaKnown RBP29.28■■■□□ 2.28
LINC00943-207ENST00000541359 KRT27Q7Z3Y8 459 aa29.28■■■□□ 2.28
LINC00943-207ENST00000541359 EP400Q96L91 3159 aa29.26■■■□□ 2.28
LINC00943-207ENST00000541359 PPM1GO15355 546 aaPredicted RBP29.24■■■□□ 2.27
LINC00943-207ENST00000541359 UPF1Q92900 1129 aaKnown RBP eCLIP29.24■■■□□ 2.27
LINC00943-207ENST00000541359 NBPF6Q5VWK0 638 aa29.23■■■□□ 2.27
LINC00943-207ENST00000541359 NBPF4Q96M43 638 aa29.23■■■□□ 2.27
LINC00943-207ENST00000541359 NCAPD2Q15021 1401 aa29.22■■■□□ 2.27
LINC00943-207ENST00000541359 CDCA7Q9BWT1 371 aaPredicted RBP29.21■■■□□ 2.27
LINC00943-207ENST00000541359 FAM182BQ5T319 152 aa29.19■■■□□ 2.26
LINC00943-207ENST00000541359 TNS2Q63HR2 1409 aa29.19■■■□□ 2.26
LINC00943-207ENST00000541359 MEGF6O75095 1541 aa29.17■■■□□ 2.26
LINC00943-207ENST00000541359 IL2RBP14784 551 aa29.17■■■□□ 2.26
LINC00943-207ENST00000541359 EIF4A2Q14240 407 aaKnown RBP29.17■■■□□ 2.26
LINC00943-207ENST00000541359 DDX10Q13206 875 aaKnown RBP29.16■■■□□ 2.26
LINC00943-207ENST00000541359 CNGB1Q14028 1251 aaPredicted RBP29.16■■■□□ 2.26
LINC00943-207ENST00000541359 DDB1Q16531 1140 aa29.16■■■□□ 2.26
LINC00943-207ENST00000541359 USHBP1Q8N6Y0 703 aa29.16■■■□□ 2.26
LINC00943-207ENST00000541359 PDE3BQ13370 1112 aa29.14■■■□□ 2.26
LINC00943-207ENST00000541359 SHANK3Q9BYB0 1731 aa29.14■■■□□ 2.25
LINC00943-207ENST00000541359 MTHFSP49914 203 aa29.13■■■□□ 2.25
LINC00943-207ENST00000541359 RGPD1P0DJD0 1748 aa29.13■■■□□ 2.25
LINC00943-207ENST00000541359 EYA1Q99502 592 aa29.12■■■□□ 2.25
LINC00943-207ENST00000541359 OVOS2A0A0G2JMS6 1433 aa29.11■■■□□ 2.25
LINC00943-207ENST00000541359 MARCH10Q8NA82 808 aaPredicted RBP29.11■■■□□ 2.25
LINC00943-207ENST00000541359 COL3A1P02461 1466 aaPredicted RBP29.1■■■□□ 2.25
LINC00943-207ENST00000541359 TNS1Q9HBL0 1735 aaKnown RBP29.09■■■□□ 2.25
LINC00943-207ENST00000541359 EXOC5O00471 708 aa29.09■■■□□ 2.25
LINC00943-207ENST00000541359 PARD3Q8TEW0 1356 aa29.09■■■□□ 2.25
LINC00943-207ENST00000541359 IGSF1Q8N6C5 1336 aa29.08■■■□□ 2.25
LINC00943-207ENST00000541359 BCL9O00512 1426 aa29.08■■■□□ 2.25
LINC00943-207ENST00000541359 FAM196AQ6ZSG2 479 aa29.07■■■□□ 2.24
LINC00943-207ENST00000541359 SBF2Q86WG5 1849 aa29.07■■■□□ 2.24
LINC00943-207ENST00000541359 IL13P35225 146 aa29.06■■■□□ 2.24
LINC00943-207ENST00000541359 PKD1L3Q7Z443 1732 aa29.06■■■□□ 2.24
LINC00943-207ENST00000541359 ZNF316A6NFI3 1004 aaPredicted RBP29.05■■■□□ 2.24
LINC00943-207ENST00000541359 PPP2R1AP30153 589 aa29.04■■■□□ 2.24
LINC00943-207ENST00000541359 CCDC125Q86Z20 511 aa29.04■■■□□ 2.24
LINC00943-207ENST00000541359 RAPGEF4Q8WZA2 1011 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms