RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 BMP1P13497 986 aa10.5□□□□□ -0.73
SUDS3-202ENST00000541280 ARHGAP9Q9BRR9 750 aa10.5□□□□□ -0.73
SUDS3-202ENST00000541280 SMARCA4P51532 1647 aa10.49□□□□□ -0.73
SUDS3-202ENST00000541280 MAGEB6P1A0A0J9YX57 407 aa10.49□□□□□ -0.73
SUDS3-202ENST00000541280 OCSTAMPQ9BR26 566 aa10.49□□□□□ -0.73
SUDS3-202ENST00000541280 TREML4Q6UXN2 200 aa10.48□□□□□ -0.73
SUDS3-202ENST00000541280 PNMA1Q8ND90 353 aa10.48□□□□□ -0.73
SUDS3-202ENST00000541280 EPS8L1Q8TE68 723 aa10.48□□□□□ -0.73
SUDS3-202ENST00000541280 CDV3Q9UKY7 258 aaKnown RBP10.48□□□□□ -0.73
SUDS3-202ENST00000541280 HMGXB3Q12766 1538 aa10.48□□□□□ -0.73
SUDS3-202ENST00000541280 FSHRP23945 695 aa10.47□□□□□ -0.73
SUDS3-202ENST00000541280 PTK2Q05397 1052 aa10.47□□□□□ -0.73
SUDS3-202ENST00000541280 MRPL14Q6P1L8 145 aaKnown RBP10.47□□□□□ -0.73
SUDS3-202ENST00000541280 VASH1Q7L8A9 365 aaPredicted RBP10.47□□□□□ -0.73
SUDS3-202ENST00000541280 BAZ1BQ9UIG0 1483 aaKnown RBP10.47□□□□□ -0.73
SUDS3-202ENST00000541280 ZIC2O95409 532 aaPredicted RBP10.46□□□□□ -0.73
SUDS3-202ENST00000541280 ITPKCQ96DU7 683 aa10.46□□□□□ -0.73
SUDS3-202ENST00000541280 CARD14Q9BXL6 1004 aa10.46□□□□□ -0.73
SUDS3-202ENST00000541280 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.73
SUDS3-202ENST00000541280 PEG3Q9GZU2 1588 aa10.45□□□□□ -0.74
SUDS3-202ENST00000541280 SOCS7O14512 581 aa10.45□□□□□ -0.74
SUDS3-202ENST00000541280 MROH2BQ7Z745 1585 aa10.44□□□□□ -0.74
SUDS3-202ENST00000541280 SLC10A4Q96EP9 437 aa10.44□□□□□ -0.74
SUDS3-202ENST00000541280 ZFP42Q96MM3 310 aa10.44□□□□□ -0.74
SUDS3-202ENST00000541280 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
SUDS3-202ENST00000541280 NFX1Q12986 1120 aaKnown RBP10.43□□□□□ -0.74
SUDS3-202ENST00000541280 ZBTB33Q86T24 672 aa10.43□□□□□ -0.74
SUDS3-202ENST00000541280 CCDC116Q8IYX3 515 aa10.43□□□□□ -0.74
SUDS3-202ENST00000541280 GJD4Q96KN9 370 aaPredicted RBP10.43□□□□□ -0.74
SUDS3-202ENST00000541280 EMILIN1Q9Y6C2 1016 aa10.43□□□□□ -0.74
SUDS3-202ENST00000541280 MEIOBQ8N635 442 aa10.42□□□□□ -0.74
SUDS3-202ENST00000541280 BANK1Q8NDB2 785 aa10.42□□□□□ -0.74
SUDS3-202ENST00000541280 ADAM32Q8TC27 787 aa10.42□□□□□ -0.74
SUDS3-202ENST00000541280 SCARF1Q14162 830 aa10.41□□□□□ -0.74
SUDS3-202ENST00000541280 KCTD15Q96SI1 283 aaPredicted RBP10.41□□□□□ -0.74
SUDS3-202ENST00000541280 TERTO14746 1132 aaKnown RBP10.39□□□□□ -0.75
SUDS3-202ENST00000541280 WFS1O76024 890 aa10.39□□□□□ -0.75
SUDS3-202ENST00000541280 PURBQ96QR8 312 aaKnown RBP10.39□□□□□ -0.75
SUDS3-202ENST00000541280 DHX9Q08211 1270 aaKnown RBP10.38□□□□□ -0.75
SUDS3-202ENST00000541280 PPP1R26Q5T8A7 1209 aaPredicted RBP10.38□□□□□ -0.75
SUDS3-202ENST00000541280 NPAS3Q8IXF0 933 aa10.38□□□□□ -0.75
SUDS3-202ENST00000541280 NBPF20Q3BBV1 942 aa10.37□□□□□ -0.75
SUDS3-202ENST00000541280 INTS6LQ5JSJ4 861 aaKnown RBP10.37□□□□□ -0.75
SUDS3-202ENST00000541280 LINC00528Q8N1L1 170 aa10.37□□□□□ -0.75
SUDS3-202ENST00000541280 RSF1Q96T23 1441 aaPredicted RBP10.37□□□□□ -0.75
SUDS3-202ENST00000541280 ERCC6Q03468 1493 aa10.36□□□□□ -0.75
SUDS3-202ENST00000541280 Q6ZVU0 165 aa10.36□□□□□ -0.75
SUDS3-202ENST00000541280 PGPEP1Q9NXJ5 209 aa10.36□□□□□ -0.75
SUDS3-202ENST00000541280 NXF1Q9UBU9 619 aaKnown RBP10.36□□□□□ -0.75
SUDS3-202ENST00000541280 CADPSQ9ULU8 1353 aa10.35□□□□□ -0.75
SUDS3-202ENST00000541280 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
SUDS3-202ENST00000541280 ESPNB1AK53 854 aa10.34□□□□□ -0.75
SUDS3-202ENST00000541280 LCE2CQ5TA81 110 aa10.34□□□□□ -0.75
SUDS3-202ENST00000541280 MTMR14Q8NCE2 650 aa10.34□□□□□ -0.75
SUDS3-202ENST00000541280 TSEN34Q9BSV6 310 aaKnown RBP10.34□□□□□ -0.75
SUDS3-202ENST00000541280 PDS5BQ9NTI5 1447 aa10.33□□□□□ -0.76
SUDS3-202ENST00000541280 WIPF1O43516 503 aa10.33□□□□□ -0.76
SUDS3-202ENST00000541280 GPR37L1O60883 481 aa10.33□□□□□ -0.76
SUDS3-202ENST00000541280 UPP2O95045 317 aa10.33□□□□□ -0.76
SUDS3-202ENST00000541280 DZIP3Q86Y13 1208 aaKnown RBP10.32□□□□□ -0.76
SUDS3-202ENST00000541280 SOS2Q07890 1332 aaPredicted RBP10.32□□□□□ -0.76
SUDS3-202ENST00000541280 BMP2P12643 396 aa10.31□□□□□ -0.76
SUDS3-202ENST00000541280 C6orf118Q5T5N4 469 aa10.31□□□□□ -0.76
SUDS3-202ENST00000541280 SEPT12Q8IYM1 358 aa10.31□□□□□ -0.76
SUDS3-202ENST00000541280 CUX2O14529 1486 aa10.3□□□□□ -0.76
SUDS3-202ENST00000541280 H3BM21 787 aa10.3□□□□□ -0.76
SUDS3-202ENST00000541280 APBB1O00213 710 aa10.3□□□□□ -0.76
SUDS3-202ENST00000541280 FBXO45P0C2W1 286 aa10.3□□□□□ -0.76
SUDS3-202ENST00000541280 CBLBQ13191 982 aa10.29□□□□□ -0.76
SUDS3-202ENST00000541280 SLC16A10Q8TF71 515 aa10.29□□□□□ -0.76
SUDS3-202ENST00000541280 NDUFB9Q9Y6M9 179 aa10.29□□□□□ -0.76
SUDS3-202ENST00000541280 SPINT1O43278 529 aa10.28□□□□□ -0.76
SUDS3-202ENST00000541280 SNRKQ9NRH2 765 aa10.28□□□□□ -0.76
SUDS3-202ENST00000541280 LAMC3Q9Y6N6 1575 aa10.27□□□□□ -0.76
SUDS3-202ENST00000541280 MCCD1P59942 119 aaPredicted RBP10.27□□□□□ -0.77
SUDS3-202ENST00000541280 NR1H3Q13133 447 aa10.27□□□□□ -0.77
SUDS3-202ENST00000541280 CCDC125Q86Z20 511 aa10.27□□□□□ -0.77
SUDS3-202ENST00000541280 NESP48681 1621 aa10.26□□□□□ -0.77
SUDS3-202ENST00000541280 SOBPA7XYQ1 873 aa10.26□□□□□ -0.77
SUDS3-202ENST00000541280 ERVH48-1M5A8F1 160 aa10.26□□□□□ -0.77
SUDS3-202ENST00000541280 PRKCSHP14314 528 aaPredicted RBP10.26□□□□□ -0.77
SUDS3-202ENST00000541280 ZNF784Q8NCA9 323 aaPredicted RBP10.26□□□□□ -0.77
SUDS3-202ENST00000541280 MAN1A2O60476 641 aa10.25□□□□□ -0.77
SUDS3-202ENST00000541280 LILRA1O75019 489 aa10.25□□□□□ -0.77
SUDS3-202ENST00000541280 ZNF592Q92610 1267 aa10.25□□□□□ -0.77
SUDS3-202ENST00000541280 TRIM52Q96A61 297 aa10.25□□□□□ -0.77
SUDS3-202ENST00000541280 TMPRSS4Q9NRS4 437 aa10.25□□□□□ -0.77
SUDS3-202ENST00000541280 DNMT3LQ9UJW3 386 aa10.25□□□□□ -0.77
SUDS3-202ENST00000541280 IRF7Q92985 503 aa10.24□□□□□ -0.77
SUDS3-202ENST00000541280 WIZO95785 1651 aa10.23□□□□□ -0.77
SUDS3-202ENST00000541280 TTLL8A6PVC2 850 aa10.23□□□□□ -0.77
SUDS3-202ENST00000541280 VSIG8P0DPA2 414 aa10.23□□□□□ -0.77
SUDS3-202ENST00000541280 PCDHB9Q9Y5E1 797 aa10.23□□□□□ -0.77
SUDS3-202ENST00000541280 ADH1AP07327 375 aa10.22□□□□□ -0.77
SUDS3-202ENST00000541280 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.22□□□□□ -0.77
SUDS3-202ENST00000541280 TOP2AP11388 1531 aaKnown RBP10.22□□□□□ -0.77
SUDS3-202ENST00000541280 GIGYF1O75420 1035 aaPredicted RBP10.21□□□□□ -0.77
SUDS3-202ENST00000541280 ADD1P35611 737 aaKnown RBP10.21□□□□□ -0.77
SUDS3-202ENST00000541280 VEGFBP49765 207 aa10.21□□□□□ -0.77
SUDS3-202ENST00000541280 KDF1Q8NAX2 398 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms