RNA–Protein interactions for RNA: ENST00000540712.1

LRR1-203, Transcript of leucine rich repeat protein 1, humanhuman

TSL 1 (best)

Gene LRR1, Length 1,597 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-203ENST00000540712 TNNT2P45379 298 aaPredicted RBP20.78■□□□□ 0.92
LRR1-203ENST00000540712 RRS1Q15050 365 aaKnown RBP20.78■□□□□ 0.92
LRR1-203ENST00000540712 AMER1Q5JTC6 1135 aaPredicted RBP20.78■□□□□ 0.92
LRR1-203ENST00000540712 MAP3K19Q56UN5 1328 aa20.78■□□□□ 0.92
LRR1-203ENST00000540712 AXIN2Q9Y2T1 843 aa20.77■□□□□ 0.92
LRR1-203ENST00000540712 CAMTA1Q9Y6Y1 1673 aa20.77■□□□□ 0.92
LRR1-203ENST00000540712 CSB-PGBD3P0DP91 1061 aa20.76■□□□□ 0.91
LRR1-203ENST00000540712 CC2D1BQ5T0F9 858 aaKnown RBP20.76■□□□□ 0.91
LRR1-203ENST00000540712 LMO7Q8WWI1 1683 aa20.76■□□□□ 0.91
LRR1-203ENST00000540712 ABCC6O95255 1503 aa20.76■□□□□ 0.91
LRR1-203ENST00000540712 IP6K1Q92551 441 aa20.76■□□□□ 0.91
LRR1-203ENST00000540712 NRAPQ86VF7 1730 aa20.75■□□□□ 0.91
LRR1-203ENST00000540712 ZNF316A6NFI3 1004 aaPredicted RBP20.75■□□□□ 0.91
LRR1-203ENST00000540712 CNGB1Q14028 1251 aaPredicted RBP20.75■□□□□ 0.91
LRR1-203ENST00000540712 COL5A2P05997 1499 aaPredicted RBP20.75■□□□□ 0.91
LRR1-203ENST00000540712 LTN1O94822 1766 aa20.75■□□□□ 0.91
LRR1-203ENST00000540712 PPM1GO15355 546 aaPredicted RBP20.74■□□□□ 0.91
LRR1-203ENST00000540712 DDX10Q13206 875 aaKnown RBP20.74■□□□□ 0.91
LRR1-203ENST00000540712 LARP1Q6PKG0 1096 aaKnown RBP20.74■□□□□ 0.91
LRR1-203ENST00000540712 TOM1L2Q6ZVM7 507 aa20.74■□□□□ 0.91
LRR1-203ENST00000540712 ANKRD26Q9UPS8 1709 aa20.74■□□□□ 0.91
LRR1-203ENST00000540712 RTL1A6NKG5 1358 aa20.73■□□□□ 0.91
LRR1-203ENST00000540712 HOXC9P31274 260 aa20.73■□□□□ 0.91
LRR1-203ENST00000540712 BLMP54132 1417 aaPredicted RBP20.73■□□□□ 0.91
LRR1-203ENST00000540712 SPATA31A5Q5VU36 1347 aa20.73■□□□□ 0.91
LRR1-203ENST00000540712 SPATA31A7Q8IWB4 1347 aa20.73■□□□□ 0.91
LRR1-203ENST00000540712 NPC1L1Q9UHC9 1359 aa20.73■□□□□ 0.91
LRR1-203ENST00000540712 COL18A1P39060 1754 aa20.72■□□□□ 0.91
LRR1-203ENST00000540712 USP35Q9P2H5 1018 aa20.72■□□□□ 0.91
LRR1-203ENST00000540712 WDR17Q8IZU2 1322 aa20.72■□□□□ 0.91
LRR1-203ENST00000540712 KIF24Q5T7B8 1368 aa20.72■□□□□ 0.91
LRR1-203ENST00000540712 A0A0G2JS52 829 aa20.71■□□□□ 0.91
LRR1-203ENST00000540712 MYT1Q01538 1121 aa20.71■□□□□ 0.91
LRR1-203ENST00000540712 ANKRD24Q8TF21 1146 aa20.71■□□□□ 0.91
LRR1-203ENST00000540712 EMILIN1Q9Y6C2 1016 aa20.71■□□□□ 0.91
LRR1-203ENST00000540712 SPATA31A1Q5TZJ5 1347 aa20.71■□□□□ 0.91
LRR1-203ENST00000540712 FLT4P35916 1363 aa20.7■□□□□ 0.9
LRR1-203ENST00000540712 CRB1P82279 1406 aa20.7■□□□□ 0.9
LRR1-203ENST00000540712 LTV1Q96GA3 475 aaPredicted RBP20.7■□□□□ 0.9
LRR1-203ENST00000540712 ERBB3P21860 1342 aa20.7■□□□□ 0.9
LRR1-203ENST00000540712 CDK12Q9NYV4 1490 aaPredicted RBP20.69■□□□□ 0.9
LRR1-203ENST00000540712 POLKQ9UBT6 870 aa20.69■□□□□ 0.9
LRR1-203ENST00000540712 FAM98CQ17RN3 349 aaKnown RBP20.68■□□□□ 0.9
LRR1-203ENST00000540712 TCP11L2Q8N4U5 519 aa20.68■□□□□ 0.9
LRR1-203ENST00000540712 THRAP3Q9Y2W1 955 aaKnown RBP20.68■□□□□ 0.9
LRR1-203ENST00000540712 SMG6Q86US8 1419 aaKnown RBP20.68■□□□□ 0.9
LRR1-203ENST00000540712 GLI3P10071 1580 aa20.68■□□□□ 0.9
LRR1-203ENST00000540712 NLRP2Q9NX02 1062 aa20.68■□□□□ 0.9
LRR1-203ENST00000540712 HSP90AB2PQ58FF8 381 aa20.67■□□□□ 0.9
LRR1-203ENST00000540712 RGPD5Q99666 1765 aa20.66■□□□□ 0.9
LRR1-203ENST00000540712 UPF1Q92900 1129 aaKnown RBP eCLIP20.66■□□□□ 0.9
LRR1-203ENST00000540712 CARD10Q9BWT7 1032 aa20.66■□□□□ 0.9
LRR1-203ENST00000540712 INSRP06213 1382 aa20.66■□□□□ 0.9
LRR1-203ENST00000540712 RGS12O14924 1447 aa20.64■□□□□ 0.9
LRR1-203ENST00000540712 ONECUT3O60422 494 aaPredicted RBP20.64■□□□□ 0.9
LRR1-203ENST00000540712 MAP2P11137 1827 aaKnown RBP20.64■□□□□ 0.9
LRR1-203ENST00000540712 BARGINQ6ZT62 677 aa20.64■□□□□ 0.9
LRR1-203ENST00000540712 SEPT12Q8IYM1 358 aa20.64■□□□□ 0.9
LRR1-203ENST00000540712 PEAK1Q9H792 1746 aa20.61■□□□□ 0.89
LRR1-203ENST00000540712 MTHFSP49914 203 aa20.6■□□□□ 0.89
LRR1-203ENST00000540712 CDCA7Q9BWT1 371 aaPredicted RBP20.6■□□□□ 0.89
LRR1-203ENST00000540712 FAM208AQ9UK61 1670 aaKnown RBP20.58■□□□□ 0.89
LRR1-203ENST00000540712 NBPF6Q5VWK0 638 aa20.57■□□□□ 0.88
LRR1-203ENST00000540712 NBPF4Q96M43 638 aa20.57■□□□□ 0.88
LRR1-203ENST00000540712 PDE3BQ13370 1112 aa20.56■□□□□ 0.88
LRR1-203ENST00000540712 KRT27Q7Z3Y8 459 aa20.56■□□□□ 0.88
LRR1-203ENST00000540712 IL2RBP14784 551 aa20.55■□□□□ 0.88
LRR1-203ENST00000540712 EIF4A2Q14240 407 aaKnown RBP20.55■□□□□ 0.88
LRR1-203ENST00000540712 RALBP1Q15311 655 aa20.55■□□□□ 0.88
LRR1-203ENST00000540712 EP400Q96L91 3159 aa20.55■□□□□ 0.88
LRR1-203ENST00000540712 DDB1Q16531 1140 aa20.55■□□□□ 0.88
LRR1-203ENST00000540712 CFAP53Q96M91 514 aa20.55■□□□□ 0.88
LRR1-203ENST00000540712 PARD3Q8TEW0 1356 aa20.54■□□□□ 0.88
LRR1-203ENST00000540712 PPP2R1AP30153 589 aa20.54■□□□□ 0.88
LRR1-203ENST00000540712 USHBP1Q8N6Y0 703 aa20.54■□□□□ 0.88
LRR1-203ENST00000540712 THSD7AQ9UPZ6 1657 aa20.53■□□□□ 0.88
LRR1-203ENST00000540712 EXOC5O00471 708 aa20.53■□□□□ 0.88
LRR1-203ENST00000540712 RAPGEF4Q8WZA2 1011 aa20.52■□□□□ 0.88
LRR1-203ENST00000540712 EYA1Q99502 592 aa20.52■□□□□ 0.88
LRR1-203ENST00000540712 DIAPH1O60610 1272 aaKnown RBP20.51■□□□□ 0.87
LRR1-203ENST00000540712 DISP2A7MBM2 1401 aa20.51■□□□□ 0.87
LRR1-203ENST00000540712 TATP17735 454 aaPredicted RBP20.5■□□□□ 0.87
LRR1-203ENST00000540712 IL13P35225 146 aa20.49■□□□□ 0.87
LRR1-203ENST00000540712 PARP4Q9UKK3 1724 aaKnown RBP20.48■□□□□ 0.87
LRR1-203ENST00000540712 RGPD2P0DJD1 1756 aa20.48■□□□□ 0.87
LRR1-203ENST00000540712 BRWD3Q6RI45 1802 aa20.47■□□□□ 0.87
LRR1-203ENST00000540712 WNK3Q9BYP7 1800 aa20.47■□□□□ 0.87
LRR1-203ENST00000540712 IGSF1Q8N6C5 1336 aa20.46■□□□□ 0.87
LRR1-203ENST00000540712 PRKRIP1Q9H875 184 aaPredicted RBP20.46■□□□□ 0.87
LRR1-203ENST00000540712 NUDCQ9Y266 331 aa20.46■□□□□ 0.87
LRR1-203ENST00000540712 MYBBP1AQ9BQG0 1328 aaKnown RBP20.46■□□□□ 0.87
LRR1-203ENST00000540712 FAM182BQ5T319 152 aa20.45■□□□□ 0.86
LRR1-203ENST00000540712 FAM196AQ6ZSG2 479 aa20.45■□□□□ 0.86
LRR1-203ENST00000540712 ZCRB1Q8TBF4 217 aaKnown RBP20.45■□□□□ 0.86
LRR1-203ENST00000540712 TNS2Q63HR2 1409 aa20.45■□□□□ 0.86
LRR1-203ENST00000540712 LRRC37A3O60309 1634 aa20.45■□□□□ 0.86
LRR1-203ENST00000540712 U2SURPO15042 1029 aaKnown RBP20.44■□□□□ 0.86
LRR1-203ENST00000540712 SRCAPQ6ZRS2 3230 aa20.43■□□□□ 0.86
LRR1-203ENST00000540712 MEGF6O75095 1541 aa20.43■□□□□ 0.86
LRR1-203ENST00000540712 NCAPD2Q15021 1401 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms