RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 CREB3O43889 395 aa13.25□□□□□ -0.29
LRP6-205ENST00000540527 P4HBP07237 508 aaKnown RBP13.25□□□□□ -0.29
LRP6-205ENST00000540527 DNAJA1P31689 397 aaKnown RBP13.25□□□□□ -0.29
LRP6-205ENST00000540527 ECM1Q16610 540 aa13.25□□□□□ -0.29
LRP6-205ENST00000540527 PLEKHG6Q3KR16 790 aa13.25□□□□□ -0.29
LRP6-205ENST00000540527 PPP1R18Q6NYC8 613 aa13.25□□□□□ -0.29
LRP6-205ENST00000540527 IRF2BPLQ9H1B7 796 aa13.25□□□□□ -0.29
LRP6-205ENST00000540527 ACBD3Q9H3P7 528 aa13.25□□□□□ -0.29
LRP6-205ENST00000540527 PCDH12Q9NPG4 1184 aa13.25□□□□□ -0.29
LRP6-205ENST00000540527 TERF2IPQ9NYB0 399 aa13.25□□□□□ -0.29
LRP6-205ENST00000540527 DMGDHQ9UI17 866 aaKnown RBP13.25□□□□□ -0.29
LRP6-205ENST00000540527 CCAR1Q8IX12 1150 aaKnown RBP13.24□□□□□ -0.29
LRP6-205ENST00000540527 SLF2Q8IX21 1173 aa13.24□□□□□ -0.29
LRP6-205ENST00000540527 PLCD4Q9BRC7 762 aa13.24□□□□□ -0.29
LRP6-205ENST00000540527 A0A0U1RQG5 324 aaPredicted RBP13.23□□□□□ -0.29
LRP6-205ENST00000540527 NR1H3Q13133 447 aa13.23□□□□□ -0.29
LRP6-205ENST00000540527 TMEM121BQ9BXQ6 578 aaPredicted RBP13.23□□□□□ -0.29
LRP6-205ENST00000540527 ANO2Q9NQ90 1003 aa13.23□□□□□ -0.29
LRP6-205ENST00000540527 ARHGAP4P98171 946 aa13.22□□□□□ -0.29
LRP6-205ENST00000540527 TYW1BQ6NUM6 668 aa13.22□□□□□ -0.29
LRP6-205ENST00000540527 DEPDC4Q8N2C3 294 aa13.22□□□□□ -0.29
LRP6-205ENST00000540527 FGD1P98174 961 aa13.21□□□□□ -0.29
LRP6-205ENST00000540527 ARID5AQ03989 594 aa13.21□□□□□ -0.29
LRP6-205ENST00000540527 PCDHGA10Q9Y5H3 936 aa13.21□□□□□ -0.29
LRP6-205ENST00000540527 XPCQ01831 940 aaPredicted RBP13.2□□□□□ -0.3
LRP6-205ENST00000540527 SGSM3Q96HU1 749 aa13.2□□□□□ -0.3
LRP6-205ENST00000540527 SPOCK3Q9BQ16 436 aa13.2□□□□□ -0.3
LRP6-205ENST00000540527 IFT57Q9NWB7 429 aa13.2□□□□□ -0.3
LRP6-205ENST00000540527 CXXC1Q9P0U4 656 aaPredicted RBP13.2□□□□□ -0.3
LRP6-205ENST00000540527 MRPL42Q9Y6G3 142 aaKnown RBP13.2□□□□□ -0.3
LRP6-205ENST00000540527 DDX11L8A8MPP1 907 aa13.19□□□□□ -0.3
LRP6-205ENST00000540527 FDX1P10109 184 aa13.19□□□□□ -0.3
LRP6-205ENST00000540527 ZNF76P36508 570 aa13.19□□□□□ -0.3
LRP6-205ENST00000540527 TNNI2P48788 182 aa13.19□□□□□ -0.3
LRP6-205ENST00000540527 DPYDQ12882 1025 aa13.19□□□□□ -0.3
LRP6-205ENST00000540527 MRS2Q9HD23 443 aa13.19□□□□□ -0.3
LRP6-205ENST00000540527 GABBR1Q9UBS5 961 aa13.19□□□□□ -0.3
LRP6-205ENST00000540527 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.19□□□□□ -0.3
LRP6-205ENST00000540527 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
LRP6-205ENST00000540527 RCCD1A6NED2 376 aa13.18□□□□□ -0.3
LRP6-205ENST00000540527 PPFIA4O75335 1185 aa13.18□□□□□ -0.3
LRP6-205ENST00000540527 USP46P62068 366 aa13.18□□□□□ -0.3
LRP6-205ENST00000540527 SF3B2Q13435 895 aaKnown RBP13.18□□□□□ -0.3
LRP6-205ENST00000540527 BMS1Q14692 1282 aaKnown RBP13.18□□□□□ -0.3
LRP6-205ENST00000540527 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
LRP6-205ENST00000540527 CCDC146Q8IYE0 955 aa13.18□□□□□ -0.3
LRP6-205ENST00000540527 RPUSD2Q8IZ73 545 aaKnown RBP13.18□□□□□ -0.3
LRP6-205ENST00000540527 FAM174AQ8TBP5 190 aa13.18□□□□□ -0.3
LRP6-205ENST00000540527 NFE2L2Q16236 605 aa13.17□□□□□ -0.3
LRP6-205ENST00000540527 TSC1Q92574 1164 aa13.17□□□□□ -0.3
LRP6-205ENST00000540527 ENPP3O14638 875 aa13.16□□□□□ -0.3
LRP6-205ENST00000540527 FKBP4Q02790 459 aaKnown RBP eCLIP13.16□□□□□ -0.3
LRP6-205ENST00000540527 MTMR2Q13614 643 aa13.16□□□□□ -0.3
LRP6-205ENST00000540527 FAM50AQ14320 339 aaKnown RBP13.16□□□□□ -0.3
LRP6-205ENST00000540527 NR6A1Q15406 480 aa13.16□□□□□ -0.3
LRP6-205ENST00000540527 PTCD2Q8WV60 388 aaKnown RBP13.16□□□□□ -0.3
LRP6-205ENST00000540527 EVI5LQ96CN4 794 aa13.16□□□□□ -0.3
LRP6-205ENST00000540527 HOXA2O43364 376 aa13.15□□□□□ -0.3
LRP6-205ENST00000540527 S100BP04271 92 aaPredicted RBP13.15□□□□□ -0.3
LRP6-205ENST00000540527 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
LRP6-205ENST00000540527 PTMSP20962 102 aa13.15□□□□□ -0.3
LRP6-205ENST00000540527 NCOA4Q13772 614 aa13.15□□□□□ -0.3
LRP6-205ENST00000540527 OCLNQ16625 522 aa13.15□□□□□ -0.3
LRP6-205ENST00000540527 TMC4Q7Z404 712 aa13.15□□□□□ -0.3
LRP6-205ENST00000540527 DDX56Q9NY93 547 aaKnown RBP13.15□□□□□ -0.3
LRP6-205ENST00000540527 SORBS3O60504 671 aa13.14□□□□□ -0.31
LRP6-205ENST00000540527 PRMT3O60678 531 aa13.14□□□□□ -0.31
LRP6-205ENST00000540527 DNAJC6O75061 913 aa13.14□□□□□ -0.31
LRP6-205ENST00000540527 FMR1Q06787 632 aaKnown RBP eCLIP13.14□□□□□ -0.31
LRP6-205ENST00000540527 NME8Q8N427 588 aa13.14□□□□□ -0.31
LRP6-205ENST00000540527 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
LRP6-205ENST00000540527 RBCK1Q9BYM8 510 aa13.14□□□□□ -0.31
LRP6-205ENST00000540527 PARP2Q9UGN5 583 aa13.14□□□□□ -0.31
LRP6-205ENST00000540527 PCDHGC3Q9UN70 934 aa13.14□□□□□ -0.31
LRP6-205ENST00000540527 STK10O94804 968 aaKnown RBP13.13□□□□□ -0.31
LRP6-205ENST00000540527 LONRF3Q496Y0 759 aa13.13□□□□□ -0.31
LRP6-205ENST00000540527 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
LRP6-205ENST00000540527 CFAP99D6REC4 459 aa13.12□□□□□ -0.31
LRP6-205ENST00000540527 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
LRP6-205ENST00000540527 FMNL1O95466 1100 aaPredicted RBP13.12□□□□□ -0.31
LRP6-205ENST00000540527 APLP1P51693 650 aa13.12□□□□□ -0.31
LRP6-205ENST00000540527 TMTC2Q8N394 836 aa13.12□□□□□ -0.31
LRP6-205ENST00000540527 FAM161BQ96MY7 647 aa13.12□□□□□ -0.31
LRP6-205ENST00000540527 SPC25Q9HBM1 224 aa13.12□□□□□ -0.31
LRP6-205ENST00000540527 DNMT3AQ9Y6K1 912 aaPredicted RBP13.12□□□□□ -0.31
LRP6-205ENST00000540527 FBXO45P0C2W1 286 aa13.11□□□□□ -0.31
LRP6-205ENST00000540527 TBX4P57082 545 aa13.11□□□□□ -0.31
LRP6-205ENST00000540527 TSHZ1Q6ZSZ6 1077 aa13.11□□□□□ -0.31
LRP6-205ENST00000540527 G3BP2Q9UN86 482 aaKnown RBP13.11□□□□□ -0.31
LRP6-205ENST00000540527 INPP5FQ9Y2H2 1132 aa13.11□□□□□ -0.31
LRP6-205ENST00000540527 TREHO43280 583 aa13.1□□□□□ -0.31
LRP6-205ENST00000540527 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
LRP6-205ENST00000540527 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
LRP6-205ENST00000540527 TMC7Q7Z402 723 aa13.1□□□□□ -0.31
LRP6-205ENST00000540527 OGFOD1Q8N543 542 aa13.1□□□□□ -0.31
LRP6-205ENST00000540527 STAG1Q8WVM7 1258 aa13.1□□□□□ -0.31
LRP6-205ENST00000540527 VTI1BQ9UEU0 232 aa13.1□□□□□ -0.31
LRP6-205ENST00000540527 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
LRP6-205ENST00000540527 DAB2P98082 770 aa13.09□□□□□ -0.31
LRP6-205ENST00000540527 PDE3BQ13370 1112 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms