RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 IP6K1Q92551 441 aa20.34■□□□□ 0.85
MDM1-210ENST00000540418 ATRNO75882 1429 aa20.34■□□□□ 0.85
MDM1-210ENST00000540418 AMPHP49418 695 aa20.33■□□□□ 0.85
MDM1-210ENST00000540418 STRN4Q9NRL3 753 aa20.33■□□□□ 0.85
MDM1-210ENST00000540418 LMO7Q8WWI1 1683 aa20.33■□□□□ 0.85
MDM1-210ENST00000540418 ANKRD26Q9UPS8 1709 aa20.32■□□□□ 0.84
MDM1-210ENST00000540418 ABCC6O95255 1503 aa20.32■□□□□ 0.84
MDM1-210ENST00000540418 COL18A1P39060 1754 aa20.32■□□□□ 0.84
MDM1-210ENST00000540418 RXRBP28702 533 aa20.31■□□□□ 0.84
MDM1-210ENST00000540418 HOXC9P31274 260 aa20.31■□□□□ 0.84
MDM1-210ENST00000540418 GJD4Q96KN9 370 aaPredicted RBP20.31■□□□□ 0.84
MDM1-210ENST00000540418 POLKQ9UBT6 870 aa20.31■□□□□ 0.84
MDM1-210ENST00000540418 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.31■□□□□ 0.84
MDM1-210ENST00000540418 RBM6P78332 1123 aaKnown RBP20.3■□□□□ 0.84
MDM1-210ENST00000540418 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
MDM1-210ENST00000540418 CCDC9Q9Y3X0 531 aaKnown RBP20.3■□□□□ 0.84
MDM1-210ENST00000540418 COL5A2P05997 1499 aaPredicted RBP20.3■□□□□ 0.84
MDM1-210ENST00000540418 KIF24Q5T7B8 1368 aa20.3■□□□□ 0.84
MDM1-210ENST00000540418 NRAPQ86VF7 1730 aa20.3■□□□□ 0.84
MDM1-210ENST00000540418 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
MDM1-210ENST00000540418 RTL1A6NKG5 1358 aa20.29■□□□□ 0.84
MDM1-210ENST00000540418 LTN1O94822 1766 aa20.29■□□□□ 0.84
MDM1-210ENST00000540418 LARP1Q6PKG0 1096 aaKnown RBP20.29■□□□□ 0.84
MDM1-210ENST00000540418 BLMP54132 1417 aaPredicted RBP20.29■□□□□ 0.84
MDM1-210ENST00000540418 PPM1GO15355 546 aaPredicted RBP20.28■□□□□ 0.84
MDM1-210ENST00000540418 SPATA31A5Q5VU36 1347 aa20.28■□□□□ 0.84
MDM1-210ENST00000540418 SPATA31A7Q8IWB4 1347 aa20.28■□□□□ 0.84
MDM1-210ENST00000540418 WDR17Q8IZU2 1322 aa20.27■□□□□ 0.84
MDM1-210ENST00000540418 ANKRD24Q8TF21 1146 aa20.27■□□□□ 0.84
MDM1-210ENST00000540418 FLT4P35916 1363 aa20.26■□□□□ 0.83
MDM1-210ENST00000540418 CSB-PGBD3P0DP91 1061 aa20.26■□□□□ 0.83
MDM1-210ENST00000540418 HSP90AB2PQ58FF8 381 aa20.26■□□□□ 0.83
MDM1-210ENST00000540418 TOM1L2Q6ZVM7 507 aa20.25■□□□□ 0.83
MDM1-210ENST00000540418 ERBB3P21860 1342 aa20.25■□□□□ 0.83
MDM1-210ENST00000540418 SPATA31A1Q5TZJ5 1347 aa20.25■□□□□ 0.83
MDM1-210ENST00000540418 INSRP06213 1382 aa20.25■□□□□ 0.83
MDM1-210ENST00000540418 CRB1P82279 1406 aa20.24■□□□□ 0.83
MDM1-210ENST00000540418 LTV1Q96GA3 475 aaPredicted RBP20.24■□□□□ 0.83
MDM1-210ENST00000540418 RGPD5Q99666 1765 aa20.22■□□□□ 0.83
MDM1-210ENST00000540418 CARD10Q9BWT7 1032 aa20.22■□□□□ 0.83
MDM1-210ENST00000540418 USP35Q9P2H5 1018 aa20.22■□□□□ 0.83
MDM1-210ENST00000540418 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
MDM1-210ENST00000540418 THRAP3Q9Y2W1 955 aaKnown RBP20.22■□□□□ 0.83
MDM1-210ENST00000540418 SMG6Q86US8 1419 aaKnown RBP20.22■□□□□ 0.83
MDM1-210ENST00000540418 MAP2P11137 1827 aaKnown RBP20.22■□□□□ 0.83
MDM1-210ENST00000540418 ONECUT3O60422 494 aaPredicted RBP20.21■□□□□ 0.83
MDM1-210ENST00000540418 MTHFSP49914 203 aa20.21■□□□□ 0.83
MDM1-210ENST00000540418 TCP11L2Q8N4U5 519 aa20.21■□□□□ 0.83
MDM1-210ENST00000540418 GLI3P10071 1580 aa20.21■□□□□ 0.83
MDM1-210ENST00000540418 NLRP2Q9NX02 1062 aa20.21■□□□□ 0.83
MDM1-210ENST00000540418 FAM98CQ17RN3 349 aaKnown RBP20.2■□□□□ 0.82
MDM1-210ENST00000540418 BARGINQ6ZT62 677 aa20.19■□□□□ 0.82
MDM1-210ENST00000540418 CDK12Q9NYV4 1490 aaPredicted RBP20.19■□□□□ 0.82
MDM1-210ENST00000540418 PARD3Q8TEW0 1356 aa20.19■□□□□ 0.82
MDM1-210ENST00000540418 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
MDM1-210ENST00000540418 RALBP1Q15311 655 aa20.18■□□□□ 0.82
MDM1-210ENST00000540418 ILDR2Q71H61 639 aa20.18■□□□□ 0.82
MDM1-210ENST00000540418 EIF4A2Q14240 407 aaKnown RBP20.16■□□□□ 0.82
MDM1-210ENST00000540418 SEPT12Q8IYM1 358 aa20.16■□□□□ 0.82
MDM1-210ENST00000540418 NBPF6Q5VWK0 638 aa20.15■□□□□ 0.82
MDM1-210ENST00000540418 NBPF4Q96M43 638 aa20.15■□□□□ 0.82
MDM1-210ENST00000540418 RGS12O14924 1447 aa20.15■□□□□ 0.82
MDM1-210ENST00000540418 A0A0G2JS52 829 aa20.14■□□□□ 0.81
MDM1-210ENST00000540418 MYT1Q01538 1121 aa20.14■□□□□ 0.81
MDM1-210ENST00000540418 CDCA7Q9BWT1 371 aaPredicted RBP20.13■□□□□ 0.81
MDM1-210ENST00000540418 FAM208AQ9UK61 1670 aaKnown RBP20.12■□□□□ 0.81
MDM1-210ENST00000540418 EYA1Q99502 592 aa20.12■□□□□ 0.81
MDM1-210ENST00000540418 PRKRIP1Q9H875 184 aaPredicted RBP20.11■□□□□ 0.81
MDM1-210ENST00000540418 IL13P35225 146 aa20.11■□□□□ 0.81
MDM1-210ENST00000540418 CFAP53Q96M91 514 aa20.11■□□□□ 0.81
MDM1-210ENST00000540418 USHBP1Q8N6Y0 703 aa20.1■□□□□ 0.81
MDM1-210ENST00000540418 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
MDM1-210ENST00000540418 IL2RBP14784 551 aa20.1■□□□□ 0.81
MDM1-210ENST00000540418 THSD7AQ9UPZ6 1657 aa20.08■□□□□ 0.81
MDM1-210ENST00000540418 DISP2A7MBM2 1401 aa20.08■□□□□ 0.81
MDM1-210ENST00000540418 MYBBP1AQ9BQG0 1328 aaKnown RBP20.08■□□□□ 0.8
MDM1-210ENST00000540418 IGSF1Q8N6C5 1336 aa20.07■□□□□ 0.8
MDM1-210ENST00000540418 KRT27Q7Z3Y8 459 aa20.07■□□□□ 0.8
MDM1-210ENST00000540418 DDB1Q16531 1140 aa20.06■□□□□ 0.8
MDM1-210ENST00000540418 NCAPD2Q15021 1401 aa20.06■□□□□ 0.8
MDM1-210ENST00000540418 RGPD2P0DJD1 1756 aa20.06■□□□□ 0.8
MDM1-210ENST00000540418 EXOC5O00471 708 aa20.06■□□□□ 0.8
MDM1-210ENST00000540418 RAPGEF4Q8WZA2 1011 aa20.06■□□□□ 0.8
MDM1-210ENST00000540418 PDE3BQ13370 1112 aa20.05■□□□□ 0.8
MDM1-210ENST00000540418 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
MDM1-210ENST00000540418 ANP32CO43423 234 aa20.05■□□□□ 0.8
MDM1-210ENST00000540418 TATP17735 454 aaPredicted RBP20.03■□□□□ 0.8
MDM1-210ENST00000540418 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
MDM1-210ENST00000540418 PARP4Q9UKK3 1724 aaKnown RBP20.02■□□□□ 0.8
MDM1-210ENST00000540418 SULT6B1Q6IMI4 303 aa20.02■□□□□ 0.8
MDM1-210ENST00000540418 U2SURPO15042 1029 aaKnown RBP20.01■□□□□ 0.79
MDM1-210ENST00000540418 MEGF6O75095 1541 aa20.01■□□□□ 0.79
MDM1-210ENST00000540418 WNK3Q9BYP7 1800 aa20.01■□□□□ 0.79
MDM1-210ENST00000540418 ZCRB1Q8TBF4 217 aaKnown RBP20.01■□□□□ 0.79
MDM1-210ENST00000540418 OVOS2A0A0G2JMS6 1433 aa20■□□□□ 0.79
MDM1-210ENST00000540418 AEBP1Q8IUX7 1158 aa20■□□□□ 0.79
MDM1-210ENST00000540418 BRWD3Q6RI45 1802 aa20■□□□□ 0.79
MDM1-210ENST00000540418 KDRP35968 1356 aa19.99■□□□□ 0.79
MDM1-210ENST00000540418 TNS2Q63HR2 1409 aa19.99■□□□□ 0.79
MDM1-210ENST00000540418 RGPD1P0DJD0 1748 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms