RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 TOM1L2Q6ZVM7 507 aa20.45■□□□□ 0.86
SEMA4D-222ENST00000540183 PTF1AQ7RTS3 328 aa20.45■□□□□ 0.86
SEMA4D-222ENST00000540183 OVOS2A0A0G2JMS6 1433 aa20.44■□□□□ 0.86
SEMA4D-222ENST00000540183 OVOS2A0A0J9YW53 1432 aa20.44■□□□□ 0.86
SEMA4D-222ENST00000540183 OVOS2Q6IE36 1432 aa20.44■□□□□ 0.86
SEMA4D-222ENST00000540183 NFAT5O94916 1531 aa20.44■□□□□ 0.86
SEMA4D-222ENST00000540183 WDR17Q8IZU2 1322 aa20.43■□□□□ 0.86
SEMA4D-222ENST00000540183 LTN1O94822 1766 aa20.43■□□□□ 0.86
SEMA4D-222ENST00000540183 DDB1Q16531 1140 aa20.42■□□□□ 0.86
SEMA4D-222ENST00000540183 ARHGEF25Q86VW2 580 aa20.42■□□□□ 0.86
SEMA4D-222ENST00000540183 NBPF14Q5TI25 921 aa20.4■□□□□ 0.86
SEMA4D-222ENST00000540183 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
SEMA4D-222ENST00000540183 MARCH10Q8NA82 808 aaPredicted RBP20.4■□□□□ 0.86
SEMA4D-222ENST00000540183 USP54Q70EL1 1684 aa20.39■□□□□ 0.86
SEMA4D-222ENST00000540183 ZNF692Q9BU19 519 aaPredicted RBP20.39■□□□□ 0.85
SEMA4D-222ENST00000540183 CASZ1Q86V15 1759 aa20.39■□□□□ 0.85
SEMA4D-222ENST00000540183 TTC21AQ8NDW8 1320 aa20.37■□□□□ 0.85
SEMA4D-222ENST00000540183 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
SEMA4D-222ENST00000540183 KAT6BQ8WYB5 2073 aa20.36■□□□□ 0.85
SEMA4D-222ENST00000540183 CSB-PGBD3P0DP91 1061 aa20.36■□□□□ 0.85
SEMA4D-222ENST00000540183 KCNH5Q8NCM2 988 aa20.36■□□□□ 0.85
SEMA4D-222ENST00000540183 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
SEMA4D-222ENST00000540183 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.35■□□□□ 0.85
SEMA4D-222ENST00000540183 CARD10Q9BWT7 1032 aa20.34■□□□□ 0.85
SEMA4D-222ENST00000540183 BCL11BQ9C0K0 894 aaPredicted RBP20.34■□□□□ 0.85
SEMA4D-222ENST00000540183 PLSCR1O15162 318 aa20.33■□□□□ 0.85
SEMA4D-222ENST00000540183 NME9Q86XW9 330 aa20.33■□□□□ 0.85
SEMA4D-222ENST00000540183 PROM2Q8N271 834 aa20.33■□□□□ 0.85
SEMA4D-222ENST00000540183 PDGFDQ9GZP0 370 aaPredicted RBP20.33■□□□□ 0.85
SEMA4D-222ENST00000540183 ABCC6O95255 1503 aa20.32■□□□□ 0.84
SEMA4D-222ENST00000540183 C11orf95C9JLR9 678 aaPredicted RBP20.32■□□□□ 0.84
SEMA4D-222ENST00000540183 NHSQ6T4R5 1651 aa20.32■□□□□ 0.84
SEMA4D-222ENST00000540183 KCNQ2O43526 872 aa20.31■□□□□ 0.84
SEMA4D-222ENST00000540183 CARD11Q9BXL7 1154 aa20.31■□□□□ 0.84
SEMA4D-222ENST00000540183 SPON1Q9HCB6 807 aa20.31■□□□□ 0.84
SEMA4D-222ENST00000540183 SBNO2Q9Y2G9 1366 aa20.31■□□□□ 0.84
SEMA4D-222ENST00000540183 BCL9O00512 1426 aa20.3■□□□□ 0.84
SEMA4D-222ENST00000540183 TMC1Q8TDI8 760 aa20.3■□□□□ 0.84
SEMA4D-222ENST00000540183 CDCA7Q9BWT1 371 aaPredicted RBP20.3■□□□□ 0.84
SEMA4D-222ENST00000540183 USP31Q70CQ4 1352 aa20.3■□□□□ 0.84
SEMA4D-222ENST00000540183 TNS2Q63HR2 1409 aa20.29■□□□□ 0.84
SEMA4D-222ENST00000540183 SLC12A5Q9H2X9 1139 aa20.29■□□□□ 0.84
SEMA4D-222ENST00000540183 PPP1R1BQ9UD71 204 aaPredicted RBP20.29■□□□□ 0.84
SEMA4D-222ENST00000540183 BTAF1O14981 1849 aa20.29■□□□□ 0.84
SEMA4D-222ENST00000540183 MYOM1P52179 1685 aa20.29■□□□□ 0.84
SEMA4D-222ENST00000540183 EXOC5O00471 708 aa20.28■□□□□ 0.84
SEMA4D-222ENST00000540183 CCDC7Q96M83 1385 aa20.28■□□□□ 0.84
SEMA4D-222ENST00000540183 RGPD2P0DJD1 1756 aa20.27■□□□□ 0.84
SEMA4D-222ENST00000540183 ERBB3P21860 1342 aa20.26■□□□□ 0.83
SEMA4D-222ENST00000540183 TXNRD1Q16881 649 aa20.25■□□□□ 0.83
SEMA4D-222ENST00000540183 ACSBG1Q96GR2 724 aa20.25■□□□□ 0.83
SEMA4D-222ENST00000540183 NLRP2Q9NX02 1062 aa20.25■□□□□ 0.83
SEMA4D-222ENST00000540183 A0A1W2PP64 1363 aa20.24■□□□□ 0.83
SEMA4D-222ENST00000540183 ZBTB7AO95365 584 aa20.24■□□□□ 0.83
SEMA4D-222ENST00000540183 EDC4Q6P2E9 1401 aaKnown RBP20.23■□□□□ 0.83
SEMA4D-222ENST00000540183 HDGFL2Q7Z4V5 671 aaPredicted RBP20.22■□□□□ 0.83
SEMA4D-222ENST00000540183 ANKRD24Q8TF21 1146 aa20.22■□□□□ 0.83
SEMA4D-222ENST00000540183 PAPPAQ13219 1627 aa20.22■□□□□ 0.83
SEMA4D-222ENST00000540183 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
SEMA4D-222ENST00000540183 ATF5Q9Y2D1 282 aaPredicted RBP20.21■□□□□ 0.83
SEMA4D-222ENST00000540183 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
SEMA4D-222ENST00000540183 FAM208AQ9UK61 1670 aaKnown RBP20.2■□□□□ 0.82
SEMA4D-222ENST00000540183 IL2RBP14784 551 aa20.19■□□□□ 0.82
SEMA4D-222ENST00000540183 YY1P25490 414 aa20.19■□□□□ 0.82
SEMA4D-222ENST00000540183 STK32BQ9NY57 414 aa20.19■□□□□ 0.82
SEMA4D-222ENST00000540183 SHANK3Q9BYB0 1731 aa20.19■□□□□ 0.82
SEMA4D-222ENST00000540183 PTGER2P43116 358 aa20.18■□□□□ 0.82
SEMA4D-222ENST00000540183 SLC15A2Q16348 729 aa20.18■□□□□ 0.82
SEMA4D-222ENST00000540183 LTV1Q96GA3 475 aaPredicted RBP20.17■□□□□ 0.82
SEMA4D-222ENST00000540183 TERF2IPQ9NYB0 399 aa20.17■□□□□ 0.82
SEMA4D-222ENST00000540183 TUBGCP6Q96RT7 1819 aa20.17■□□□□ 0.82
SEMA4D-222ENST00000540183 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
SEMA4D-222ENST00000540183 FBLN1P23142 703 aa20.16■□□□□ 0.82
SEMA4D-222ENST00000540183 TESK2Q96S53 571 aa20.16■□□□□ 0.82
SEMA4D-222ENST00000540183 ST20-MTHFSA0A0A6YYL1 179 aa20.14■□□□□ 0.81
SEMA4D-222ENST00000540183 IP6K1Q92551 441 aa20.13■□□□□ 0.81
SEMA4D-222ENST00000540183 ZNF827Q17R98 1081 aa20.12■□□□□ 0.81
SEMA4D-222ENST00000540183 UTRNP46939 3433 aa20.11■□□□□ 0.81
SEMA4D-222ENST00000540183 QSER1Q2KHR3 1735 aa20.11■□□□□ 0.81
SEMA4D-222ENST00000540183 MAP3K19Q56UN5 1328 aa20.11■□□□□ 0.81
SEMA4D-222ENST00000540183 DDX54Q8TDD1 881 aaKnown RBP20.11■□□□□ 0.81
SEMA4D-222ENST00000540183 PUS7Q96PZ0 661 aaKnown RBP20.11■□□□□ 0.81
SEMA4D-222ENST00000540183 LRRC4BQ9NT99 713 aa20.11■□□□□ 0.81
SEMA4D-222ENST00000540183 SGIP1Q9BQI5 828 aa20.1■□□□□ 0.81
SEMA4D-222ENST00000540183 FHDC1Q9C0D6 1143 aaPredicted RBP20.1■□□□□ 0.81
SEMA4D-222ENST00000540183 KIF20BQ96Q89 1820 aa20.1■□□□□ 0.81
SEMA4D-222ENST00000540183 LY75O60449 1722 aa20.1■□□□□ 0.81
SEMA4D-222ENST00000540183 DCAF8L1A6NGE4 600 aa20.09■□□□□ 0.81
SEMA4D-222ENST00000540183 CHD4Q14839 1912 aa20.09■□□□□ 0.81
SEMA4D-222ENST00000540183 HOXC9P31274 260 aa20.08■□□□□ 0.81
SEMA4D-222ENST00000540183 COG3Q96JB2 828 aa20.08■□□□□ 0.81
SEMA4D-222ENST00000540183 MTFR1LQ9H019 292 aa20.08■□□□□ 0.81
SEMA4D-222ENST00000540183 MEGF6O75095 1541 aa20.07■□□□□ 0.8
SEMA4D-222ENST00000540183 KCNQ4P56696 695 aa20.07■□□□□ 0.8
SEMA4D-222ENST00000540183 AMPHP49418 695 aa20.06■□□□□ 0.8
SEMA4D-222ENST00000540183 COL24A1Q17RW2 1714 aa20.06■□□□□ 0.8
SEMA4D-222ENST00000540183 SYT17Q9BSW7 474 aa20.06■□□□□ 0.8
SEMA4D-222ENST00000540183 ANKRD36BQ8N2N9 1353 aa20.05■□□□□ 0.8
SEMA4D-222ENST00000540183 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
SEMA4D-222ENST00000540183 NSD2O96028 1365 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms