RNA–Protein interactions for RNA: ENST00000539611.1

ARF3-206, Transcript of ADP ribosylation factor 3, humanhuman

TSL 5

Gene ARF3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-206ENST00000539611 COG3Q96JB2 828 aa29.59■■■□□ 2.33
ARF3-206ENST00000539611 ABCC6O95255 1503 aa29.58■■■□□ 2.33
ARF3-206ENST00000539611 FAM98CQ17RN3 349 aaKnown RBP29.58■■■□□ 2.33
ARF3-206ENST00000539611 GGNBP2Q9H3C7 697 aa29.57■■■□□ 2.32
ARF3-206ENST00000539611 KIF7Q2M1P5 1343 aa29.55■■■□□ 2.32
ARF3-206ENST00000539611 UPF1Q92900 1129 aaKnown RBP eCLIP29.53■■■□□ 2.32
ARF3-206ENST00000539611 THSD7AQ9UPZ6 1657 aa29.53■■■□□ 2.32
ARF3-206ENST00000539611 CRB1P82279 1406 aa29.53■■■□□ 2.32
ARF3-206ENST00000539611 KIF20BQ96Q89 1820 aa29.52■■■□□ 2.32
ARF3-206ENST00000539611 LTN1O94822 1766 aa29.52■■■□□ 2.32
ARF3-206ENST00000539611 WDR17Q8IZU2 1322 aa29.51■■■□□ 2.32
ARF3-206ENST00000539611 FBLN1P23142 703 aa29.51■■■□□ 2.31
ARF3-206ENST00000539611 PANK3Q9H999 370 aa29.51■■■□□ 2.31
ARF3-206ENST00000539611 USP35Q9P2H5 1018 aa29.51■■■□□ 2.31
ARF3-206ENST00000539611 BRWD3Q6RI45 1802 aa29.5■■■□□ 2.31
ARF3-206ENST00000539611 RGPD5Q99666 1765 aa29.5■■■□□ 2.31
ARF3-206ENST00000539611 BARGINQ6ZT62 677 aa29.5■■■□□ 2.31
ARF3-206ENST00000539611 TCP11L2Q8N4U5 519 aa29.49■■■□□ 2.31
ARF3-206ENST00000539611 THRAP3Q9Y2W1 955 aaKnown RBP29.48■■■□□ 2.31
ARF3-206ENST00000539611 CGNL1Q0VF96 1302 aa29.47■■■□□ 2.31
ARF3-206ENST00000539611 MAP3K19Q56UN5 1328 aa29.47■■■□□ 2.31
ARF3-206ENST00000539611 TOM1L2Q6ZVM7 507 aa29.46■■■□□ 2.31
ARF3-206ENST00000539611 IP6K1Q92551 441 aa29.46■■■□□ 2.31
ARF3-206ENST00000539611 A0A0G2JS52 829 aa29.45■■■□□ 2.31
ARF3-206ENST00000539611 MYT1Q01538 1121 aa29.45■■■□□ 2.31
ARF3-206ENST00000539611 KRT27Q7Z3Y8 459 aa29.45■■■□□ 2.31
ARF3-206ENST00000539611 ERBB3P21860 1342 aa29.45■■■□□ 2.3
ARF3-206ENST00000539611 EP400Q96L91 3159 aa29.44■■■□□ 2.3
ARF3-206ENST00000539611 BLMP54132 1417 aaPredicted RBP29.44■■■□□ 2.3
ARF3-206ENST00000539611 WASHC2AQ641Q2 1341 aa29.43■■■□□ 2.3
ARF3-206ENST00000539611 CCDC7Q96M83 1385 aa29.42■■■□□ 2.3
ARF3-206ENST00000539611 RRS1Q15050 365 aaKnown RBP29.42■■■□□ 2.3
ARF3-206ENST00000539611 CARD10Q9BWT7 1032 aa29.42■■■□□ 2.3
ARF3-206ENST00000539611 CSB-PGBD3P0DP91 1061 aa29.41■■■□□ 2.3
ARF3-206ENST00000539611 HOXC9P31274 260 aa29.4■■■□□ 2.3
ARF3-206ENST00000539611 ANKRD24Q8TF21 1146 aa29.4■■■□□ 2.3
ARF3-206ENST00000539611 RTL1A6NKG5 1358 aa29.39■■■□□ 2.29
ARF3-206ENST00000539611 AMPHP49418 695 aa29.37■■■□□ 2.29
ARF3-206ENST00000539611 PARP4Q9UKK3 1724 aaKnown RBP29.36■■■□□ 2.29
ARF3-206ENST00000539611 DISP2A7MBM2 1401 aa29.35■■■□□ 2.29
ARF3-206ENST00000539611 ANKRD26Q9UPS8 1709 aa29.34■■■□□ 2.29
ARF3-206ENST00000539611 NSD2O96028 1365 aa29.34■■■□□ 2.29
ARF3-206ENST00000539611 KIF24Q5T7B8 1368 aa29.34■■■□□ 2.29
ARF3-206ENST00000539611 PEAK1Q9H792 1746 aa29.34■■■□□ 2.29
ARF3-206ENST00000539611 WNK3Q9BYP7 1800 aa29.32■■■□□ 2.28
ARF3-206ENST00000539611 PER1O15534 1290 aaPredicted RBP29.32■■■□□ 2.28
ARF3-206ENST00000539611 FAM182BQ5T319 152 aa29.32■■■□□ 2.28
ARF3-206ENST00000539611 NLRP2Q9NX02 1062 aa29.32■■■□□ 2.28
ARF3-206ENST00000539611 KNSTRNQ9Y448 316 aa29.32■■■□□ 2.28
ARF3-206ENST00000539611 EMILIN1Q9Y6C2 1016 aa29.31■■■□□ 2.28
ARF3-206ENST00000539611 FLT4P35916 1363 aa29.3■■■□□ 2.28
ARF3-206ENST00000539611 AMER1Q5JTC6 1135 aaPredicted RBP29.3■■■□□ 2.28
ARF3-206ENST00000539611 LTV1Q96GA3 475 aaPredicted RBP29.3■■■□□ 2.28
ARF3-206ENST00000539611 CDCA7Q9BWT1 371 aaPredicted RBP29.3■■■□□ 2.28
ARF3-206ENST00000539611 LRRC37A3O60309 1634 aa29.3■■■□□ 2.28
ARF3-206ENST00000539611 INSRP06213 1382 aa29.29■■■□□ 2.28
ARF3-206ENST00000539611 CCDC125Q86Z20 511 aa29.29■■■□□ 2.28
ARF3-206ENST00000539611 PDE3BQ13370 1112 aa29.28■■■□□ 2.28
ARF3-206ENST00000539611 HSP90AB2PQ58FF8 381 aa29.28■■■□□ 2.28
ARF3-206ENST00000539611 FAM208AQ9UK61 1670 aaKnown RBP29.28■■■□□ 2.28
ARF3-206ENST00000539611 POLKQ9UBT6 870 aa29.27■■■□□ 2.28
ARF3-206ENST00000539611 DDB1Q16531 1140 aa29.26■■■□□ 2.27
ARF3-206ENST00000539611 TNNT2P45379 298 aaPredicted RBP29.24■■■□□ 2.27
ARF3-206ENST00000539611 FAM196AQ6ZSG2 479 aa29.23■■■□□ 2.27
ARF3-206ENST00000539611 MORC1Q86VD1 984 aa29.22■■■□□ 2.27
ARF3-206ENST00000539611 IL2RBP14784 551 aa29.21■■■□□ 2.27
ARF3-206ENST00000539611 NBPF6Q5VWK0 638 aa29.21■■■□□ 2.27
ARF3-206ENST00000539611 NBPF4Q96M43 638 aa29.21■■■□□ 2.27
ARF3-206ENST00000539611 MAP2P11137 1827 aaKnown RBP29.21■■■□□ 2.27
ARF3-206ENST00000539611 PPM1GO15355 546 aaPredicted RBP29.2■■■□□ 2.26
ARF3-206ENST00000539611 SMG6Q86US8 1419 aaKnown RBP29.2■■■□□ 2.26
ARF3-206ENST00000539611 RGPD2P0DJD1 1756 aa29.19■■■□□ 2.26
ARF3-206ENST00000539611 MARCH10Q8NA82 808 aaPredicted RBP29.19■■■□□ 2.26
ARF3-206ENST00000539611 TNS2Q63HR2 1409 aa29.19■■■□□ 2.26
ARF3-206ENST00000539611 EXOC5O00471 708 aa29.18■■■□□ 2.26
ARF3-206ENST00000539611 OVOS2A0A0G2JMS6 1433 aa29.17■■■□□ 2.26
ARF3-206ENST00000539611 NPC1L1Q9UHC9 1359 aa29.16■■■□□ 2.26
ARF3-206ENST00000539611 BCL9O00512 1426 aa29.14■■■□□ 2.26
ARF3-206ENST00000539611 RGPD1P0DJD0 1748 aa29.14■■■□□ 2.25
ARF3-206ENST00000539611 SF3B2Q13435 895 aaKnown RBP29.13■■■□□ 2.25
ARF3-206ENST00000539611 DEFB132Q7Z7B7 95 aa29.13■■■□□ 2.25
ARF3-206ENST00000539611 USHBP1Q8N6Y0 703 aa29.13■■■□□ 2.25
ARF3-206ENST00000539611 NCAPD2Q15021 1401 aa29.12■■■□□ 2.25
ARF3-206ENST00000539611 TNS1Q9HBL0 1735 aaKnown RBP29.12■■■□□ 2.25
ARF3-206ENST00000539611 MEGF6O75095 1541 aa29.12■■■□□ 2.25
ARF3-206ENST00000539611 TRIM37O94972 964 aa29.12■■■□□ 2.25
ARF3-206ENST00000539611 ZEB1P37275 1124 aaPredicted RBP29.12■■■□□ 2.25
ARF3-206ENST00000539611 CC2D1BQ5T0F9 858 aaKnown RBP29.12■■■□□ 2.25
ARF3-206ENST00000539611 EIF4A2Q14240 407 aaKnown RBP29.09■■■□□ 2.25
ARF3-206ENST00000539611 EYA1Q99502 592 aa29.07■■■□□ 2.24
ARF3-206ENST00000539611 BAG6P46379 1132 aa29.06■■■□□ 2.24
ARF3-206ENST00000539611 SBF2Q86WG5 1849 aa29.04■■■□□ 2.24
ARF3-206ENST00000539611 RAPGEF4Q8WZA2 1011 aa29.03■■■□□ 2.24
ARF3-206ENST00000539611 EN1Q05925 392 aaPredicted RBP29.02■■■□□ 2.24
ARF3-206ENST00000539611 ZCRB1Q8TBF4 217 aaKnown RBP29.02■■■□□ 2.24
ARF3-206ENST00000539611 SHANK3Q9BYB0 1731 aa29.02■■■□□ 2.24
ARF3-206ENST00000539611 APBA3O96018 575 aa29.01■■■□□ 2.23
ARF3-206ENST00000539611 TATP17735 454 aaPredicted RBP29.01■■■□□ 2.23
ARF3-206ENST00000539611 MTHFSP49914 203 aa29.01■■■□□ 2.23
ARF3-206ENST00000539611 PTF1AQ7RTS3 328 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms