RNA–Protein interactions for RNA: ENST00000538980.5

RAP1B-219, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-219ENST00000538980 ABCC6O95255 1503 aa27.72■■■□□ 2.03
RAP1B-219ENST00000538980 FYB1O15117 783 aa27.71■■■□□ 2.03
RAP1B-219ENST00000538980 BRWD3Q6RI45 1802 aa27.7■■■□□ 2.02
RAP1B-219ENST00000538980 SPATA31A1Q5TZJ5 1347 aa27.67■■■□□ 2.02
RAP1B-219ENST00000538980 LARP1Q6PKG0 1096 aaKnown RBP27.67■■■□□ 2.02
RAP1B-219ENST00000538980 PANK3Q9H999 370 aa27.67■■■□□ 2.02
RAP1B-219ENST00000538980 AXIN2Q9Y2T1 843 aa27.67■■■□□ 2.02
RAP1B-219ENST00000538980 ANKRD26Q9UPS8 1709 aa27.67■■■□□ 2.02
RAP1B-219ENST00000538980 A0A0G2JS52 829 aa27.66■■■□□ 2.02
RAP1B-219ENST00000538980 MYT1Q01538 1121 aa27.66■■■□□ 2.02
RAP1B-219ENST00000538980 FAM98CQ17RN3 349 aaKnown RBP27.66■■■□□ 2.02
RAP1B-219ENST00000538980 CGNL1Q0VF96 1302 aa27.66■■■□□ 2.02
RAP1B-219ENST00000538980 SEPT12Q8IYM1 358 aa27.65■■■□□ 2.02
RAP1B-219ENST00000538980 UPF1Q92900 1129 aaKnown RBP eCLIP27.65■■■□□ 2.02
RAP1B-219ENST00000538980 USP35Q9P2H5 1018 aa27.65■■■□□ 2.02
RAP1B-219ENST00000538980 THSD7AQ9UPZ6 1657 aa27.64■■■□□ 2.02
RAP1B-219ENST00000538980 CRB1P82279 1406 aa27.64■■■□□ 2.02
RAP1B-219ENST00000538980 CCDC7Q96M83 1385 aa27.63■■■□□ 2.01
RAP1B-219ENST00000538980 ONECUT3O60422 494 aaPredicted RBP27.62■■■□□ 2.01
RAP1B-219ENST00000538980 WDR17Q8IZU2 1322 aa27.62■■■□□ 2.01
RAP1B-219ENST00000538980 CSB-PGBD3P0DP91 1061 aa27.61■■■□□ 2.01
RAP1B-219ENST00000538980 TOM1L2Q6ZVM7 507 aa27.6■■■□□ 2.01
RAP1B-219ENST00000538980 MAP3K19Q56UN5 1328 aa27.6■■■□□ 2.01
RAP1B-219ENST00000538980 FBLN1P23142 703 aa27.59■■■□□ 2.01
RAP1B-219ENST00000538980 WNK3Q9BYP7 1800 aa27.59■■■□□ 2.01
RAP1B-219ENST00000538980 WASHC2AQ641Q2 1341 aa27.59■■■□□ 2.01
RAP1B-219ENST00000538980 TCP11L2Q8N4U5 519 aa27.58■■■□□ 2.01
RAP1B-219ENST00000538980 BLMP54132 1417 aaPredicted RBP27.58■■■□□ 2
RAP1B-219ENST00000538980 AMPHP49418 695 aa27.56■■■□□ 2
RAP1B-219ENST00000538980 RRS1Q15050 365 aaKnown RBP27.56■■■□□ 2
RAP1B-219ENST00000538980 BARGINQ6ZT62 677 aa27.55■■■□□ 2
RAP1B-219ENST00000538980 IP6K1Q92551 441 aa27.55■■■□□ 2
RAP1B-219ENST00000538980 THRAP3Q9Y2W1 955 aaKnown RBP27.55■■■□□ 2
RAP1B-219ENST00000538980 ERBB3P21860 1342 aa27.55■■■□□ 2
RAP1B-219ENST00000538980 FAM208AQ9UK61 1670 aaKnown RBP27.55■■■□□ 2
RAP1B-219ENST00000538980 RTL1A6NKG5 1358 aa27.54■■■□□ 2
RAP1B-219ENST00000538980 MAP2P11137 1827 aaKnown RBP27.54■■■□□ 2
RAP1B-219ENST00000538980 KNSTRNQ9Y448 316 aa27.54■■■□□ 2
RAP1B-219ENST00000538980 PARP4Q9UKK3 1724 aaKnown RBP27.53■■■□□ 2
RAP1B-219ENST00000538980 NSD2O96028 1365 aa27.53■■■□□ 2
RAP1B-219ENST00000538980 KRT27Q7Z3Y8 459 aa27.53■■■□□ 2
RAP1B-219ENST00000538980 ANKRD24Q8TF21 1146 aa27.53■■■□□ 2
RAP1B-219ENST00000538980 PEAK1Q9H792 1746 aa27.53■■■□□ 2
RAP1B-219ENST00000538980 HOXC9P31274 260 aa27.52■■■□□ 2
RAP1B-219ENST00000538980 CARD10Q9BWT7 1032 aa27.51■■□□□ 1.99
RAP1B-219ENST00000538980 LTV1Q96GA3 475 aaPredicted RBP27.5■■□□□ 1.99
RAP1B-219ENST00000538980 ZEB1P37275 1124 aaPredicted RBP27.49■■□□□ 1.99
RAP1B-219ENST00000538980 NLRP2Q9NX02 1062 aa27.49■■□□□ 1.99
RAP1B-219ENST00000538980 RGPD2P0DJD1 1756 aa27.48■■□□□ 1.99
RAP1B-219ENST00000538980 LRRC37A3O60309 1634 aa27.48■■□□□ 1.99
RAP1B-219ENST00000538980 FLT4P35916 1363 aa27.47■■□□□ 1.99
RAP1B-219ENST00000538980 KIF24Q5T7B8 1368 aa27.47■■□□□ 1.99
RAP1B-219ENST00000538980 TNNT2P45379 298 aaPredicted RBP27.46■■□□□ 1.99
RAP1B-219ENST00000538980 EMILIN1Q9Y6C2 1016 aa27.46■■□□□ 1.99
RAP1B-219ENST00000538980 SMG6Q86US8 1419 aaKnown RBP27.44■■□□□ 1.98
RAP1B-219ENST00000538980 PPM1GO15355 546 aaPredicted RBP27.43■■□□□ 1.98
RAP1B-219ENST00000538980 AMER1Q5JTC6 1135 aaPredicted RBP27.43■■□□□ 1.98
RAP1B-219ENST00000538980 MORC1Q86VD1 984 aa27.43■■□□□ 1.98
RAP1B-219ENST00000538980 DISP2A7MBM2 1401 aa27.42■■□□□ 1.98
RAP1B-219ENST00000538980 PDE3BQ13370 1112 aa27.42■■□□□ 1.98
RAP1B-219ENST00000538980 CDCA7Q9BWT1 371 aaPredicted RBP27.42■■□□□ 1.98
RAP1B-219ENST00000538980 INSRP06213 1382 aa27.42■■□□□ 1.98
RAP1B-219ENST00000538980 PER1O15534 1290 aaPredicted RBP27.41■■□□□ 1.98
RAP1B-219ENST00000538980 HSP90AB2PQ58FF8 381 aa27.41■■□□□ 1.98
RAP1B-219ENST00000538980 FAM182BQ5T319 152 aa27.41■■□□□ 1.98
RAP1B-219ENST00000538980 DDB1Q16531 1140 aa27.39■■□□□ 1.98
RAP1B-219ENST00000538980 POLKQ9UBT6 870 aa27.39■■□□□ 1.98
RAP1B-219ENST00000538980 EP400Q96L91 3159 aa27.38■■□□□ 1.97
RAP1B-219ENST00000538980 CC2D1BQ5T0F9 858 aaKnown RBP27.36■■□□□ 1.97
RAP1B-219ENST00000538980 RGPD1P0DJD0 1748 aa27.36■■□□□ 1.97
RAP1B-219ENST00000538980 IL2RBP14784 551 aa27.35■■□□□ 1.97
RAP1B-219ENST00000538980 TNS2Q63HR2 1409 aa27.33■■□□□ 1.97
RAP1B-219ENST00000538980 CNGB1Q14028 1251 aaPredicted RBP27.33■■□□□ 1.97
RAP1B-219ENST00000538980 CCDC125Q86Z20 511 aa27.33■■□□□ 1.97
RAP1B-219ENST00000538980 NPC1L1Q9UHC9 1359 aa27.33■■□□□ 1.97
RAP1B-219ENST00000538980 NBPF6Q5VWK0 638 aa27.32■■□□□ 1.96
RAP1B-219ENST00000538980 FAM196AQ6ZSG2 479 aa27.32■■□□□ 1.96
RAP1B-219ENST00000538980 NBPF4Q96M43 638 aa27.32■■□□□ 1.96
RAP1B-219ENST00000538980 EXOC5O00471 708 aa27.31■■□□□ 1.96
RAP1B-219ENST00000538980 OVOS2A0A0G2JMS6 1433 aa27.31■■□□□ 1.96
RAP1B-219ENST00000538980 TNS1Q9HBL0 1735 aaKnown RBP27.3■■□□□ 1.96
RAP1B-219ENST00000538980 SF3B2Q13435 895 aaKnown RBP27.3■■□□□ 1.96
RAP1B-219ENST00000538980 USHBP1Q8N6Y0 703 aa27.3■■□□□ 1.96
RAP1B-219ENST00000538980 SBF2Q86WG5 1849 aa27.27■■□□□ 1.96
RAP1B-219ENST00000538980 MEGF6O75095 1541 aa27.27■■□□□ 1.96
RAP1B-219ENST00000538980 MARCH10Q8NA82 808 aaPredicted RBP27.26■■□□□ 1.95
RAP1B-219ENST00000538980 TRIM37O94972 964 aa27.24■■□□□ 1.95
RAP1B-219ENST00000538980 EIF4A2Q14240 407 aaKnown RBP27.24■■□□□ 1.95
RAP1B-219ENST00000538980 SHANK3Q9BYB0 1731 aa27.24■■□□□ 1.95
RAP1B-219ENST00000538980 RAPGEF4Q8WZA2 1011 aa27.23■■□□□ 1.95
RAP1B-219ENST00000538980 NCAPD2Q15021 1401 aa27.22■■□□□ 1.95
RAP1B-219ENST00000538980 EYA1Q99502 592 aa27.21■■□□□ 1.95
RAP1B-219ENST00000538980 TATP17735 454 aaPredicted RBP27.2■■□□□ 1.94
RAP1B-219ENST00000538980 MTHFSP49914 203 aa27.2■■□□□ 1.94
RAP1B-219ENST00000538980 DEFB132Q7Z7B7 95 aa27.2■■□□□ 1.94
RAP1B-219ENST00000538980 BAG6P46379 1132 aa27.19■■□□□ 1.94
RAP1B-219ENST00000538980 BCL9O00512 1426 aa27.18■■□□□ 1.94
RAP1B-219ENST00000538980 PKD1L3Q7Z443 1732 aa27.17■■□□□ 1.94
RAP1B-219ENST00000538980 ZCRB1Q8TBF4 217 aaKnown RBP27.17■■□□□ 1.94
RAP1B-219ENST00000538980 DDX54Q8TDD1 881 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms