RNA–Protein interactions for RNA: ENST00000537954.5

PGA3-203, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA3, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-203ENST00000537954 HDGFL2Q7Z4V5 671 aaPredicted RBP23.37■■□□□ 1.33
PGA3-203ENST00000537954 CAMKK2Q96RR4 588 aa23.37■■□□□ 1.33
PGA3-203ENST00000537954 USP35Q9P2H5 1018 aa23.37■■□□□ 1.33
PGA3-203ENST00000537954 BRD4O60885 1362 aaPredicted RBP23.37■■□□□ 1.33
PGA3-203ENST00000537954 TTC21BQ7Z4L5 1316 aa23.36■■□□□ 1.33
PGA3-203ENST00000537954 CAMTA1Q9Y6Y1 1673 aa23.36■■□□□ 1.33
PGA3-203ENST00000537954 LARP1Q6PKG0 1096 aaKnown RBP23.36■■□□□ 1.33
PGA3-203ENST00000537954 GCP02774 474 aa23.35■■□□□ 1.33
PGA3-203ENST00000537954 NLRP13Q86W25 1043 aa23.35■■□□□ 1.33
PGA3-203ENST00000537954 R3HDM1Q15032 1099 aaKnown RBP23.34■■□□□ 1.33
PGA3-203ENST00000537954 PANK3Q9H999 370 aa23.34■■□□□ 1.33
PGA3-203ENST00000537954 TNS1Q9HBL0 1735 aaKnown RBP23.33■■□□□ 1.33
PGA3-203ENST00000537954 TCP11L2Q8N4U5 519 aa23.33■■□□□ 1.33
PGA3-203ENST00000537954 NSD3Q9BZ95 1437 aa23.33■■□□□ 1.32
PGA3-203ENST00000537954 USP54Q70EL1 1684 aa23.32■■□□□ 1.32
PGA3-203ENST00000537954 APBA3O96018 575 aa23.31■■□□□ 1.32
PGA3-203ENST00000537954 PDE3BQ13370 1112 aa23.31■■□□□ 1.32
PGA3-203ENST00000537954 THRAP3Q9Y2W1 955 aaKnown RBP23.31■■□□□ 1.32
PGA3-203ENST00000537954 LMO7Q8WWI1 1683 aa23.31■■□□□ 1.32
PGA3-203ENST00000537954 ZNF316A6NFI3 1004 aaPredicted RBP23.3■■□□□ 1.32
PGA3-203ENST00000537954 KIF20BQ96Q89 1820 aa23.3■■□□□ 1.32
PGA3-203ENST00000537954 TTC21AQ8NDW8 1320 aa23.3■■□□□ 1.32
PGA3-203ENST00000537954 PARD3Q8TEW0 1356 aa23.29■■□□□ 1.32
PGA3-203ENST00000537954 NME9Q86XW9 330 aa23.29■■□□□ 1.32
PGA3-203ENST00000537954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.29■■□□□ 1.32
PGA3-203ENST00000537954 PER1O15534 1290 aaPredicted RBP23.27■■□□□ 1.32
PGA3-203ENST00000537954 COL5A2P05997 1499 aaPredicted RBP23.26■■□□□ 1.31
PGA3-203ENST00000537954 USP31Q70CQ4 1352 aa23.26■■□□□ 1.31
PGA3-203ENST00000537954 OVOS2A0A0J9YW53 1432 aa23.25■■□□□ 1.31
PGA3-203ENST00000537954 OVOS2Q6IE36 1432 aa23.25■■□□□ 1.31
PGA3-203ENST00000537954 SLIT3O75094 1523 aa23.25■■□□□ 1.31
PGA3-203ENST00000537954 NLRP6P59044 892 aa23.25■■□□□ 1.31
PGA3-203ENST00000537954 FYB1O15117 783 aa23.24■■□□□ 1.31
PGA3-203ENST00000537954 AATKQ6ZMQ8 1374 aa23.24■■□□□ 1.31
PGA3-203ENST00000537954 CRB1P82279 1406 aa23.22■■□□□ 1.31
PGA3-203ENST00000537954 ANKRD26Q9UPS8 1709 aa23.22■■□□□ 1.31
PGA3-203ENST00000537954 NFAT5O94916 1531 aa23.2■■□□□ 1.3
PGA3-203ENST00000537954 DDX10Q13206 875 aaKnown RBP23.2■■□□□ 1.3
PGA3-203ENST00000537954 AMER1Q5JTC6 1135 aaPredicted RBP23.2■■□□□ 1.3
PGA3-203ENST00000537954 GGNBP2Q9H3C7 697 aa23.19■■□□□ 1.3
PGA3-203ENST00000537954 AXIN2Q9Y2T1 843 aa23.19■■□□□ 1.3
PGA3-203ENST00000537954 CGNL1Q0VF96 1302 aa23.18■■□□□ 1.3
PGA3-203ENST00000537954 PARP4Q9UKK3 1724 aaKnown RBP23.17■■□□□ 1.3
PGA3-203ENST00000537954 ZBTB7CA1YPR0 619 aa23.17■■□□□ 1.3
PGA3-203ENST00000537954 NBPF14Q5TI25 921 aa23.17■■□□□ 1.3
PGA3-203ENST00000537954 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
PGA3-203ENST00000537954 RREB1Q92766 1687 aa23.16■■□□□ 1.3
PGA3-203ENST00000537954 TOM1L2Q6ZVM7 507 aa23.15■■□□□ 1.3
PGA3-203ENST00000537954 ARHGEF25Q86VW2 580 aa23.15■■□□□ 1.3
PGA3-203ENST00000537954 COL18A1P39060 1754 aa23.14■■□□□ 1.29
PGA3-203ENST00000537954 WDR17Q8IZU2 1322 aa23.13■■□□□ 1.29
PGA3-203ENST00000537954 DDB1Q16531 1140 aa23.13■■□□□ 1.29
PGA3-203ENST00000537954 OVOS2A0A0G2JMS6 1433 aa23.13■■□□□ 1.29
PGA3-203ENST00000537954 NUP188Q5SRE5 1749 aa23.13■■□□□ 1.29
PGA3-203ENST00000537954 NSD2O96028 1365 aa23.13■■□□□ 1.29
PGA3-203ENST00000537954 NPC1L1Q9UHC9 1359 aa23.13■■□□□ 1.29
PGA3-203ENST00000537954 PLSCR1O15162 318 aa23.12■■□□□ 1.29
PGA3-203ENST00000537954 KCNH5Q8NCM2 988 aa23.12■■□□□ 1.29
PGA3-203ENST00000537954 COG3Q96JB2 828 aa23.12■■□□□ 1.29
PGA3-203ENST00000537954 PEAK1Q9H792 1746 aa23.12■■□□□ 1.29
PGA3-203ENST00000537954 FBLN1P23142 703 aa23.11■■□□□ 1.29
PGA3-203ENST00000537954 CDCA7Q9BWT1 371 aaPredicted RBP23.1■■□□□ 1.29
PGA3-203ENST00000537954 LTN1O94822 1766 aa23.09■■□□□ 1.29
PGA3-203ENST00000537954 PTF1AQ7RTS3 328 aa23.09■■□□□ 1.29
PGA3-203ENST00000537954 MARCH10Q8NA82 808 aaPredicted RBP23.09■■□□□ 1.29
PGA3-203ENST00000537954 BCL11BQ9C0K0 894 aaPredicted RBP23.09■■□□□ 1.29
PGA3-203ENST00000537954 SOX12O15370 315 aa23.08■■□□□ 1.29
PGA3-203ENST00000537954 CARD10Q9BWT7 1032 aa23.08■■□□□ 1.29
PGA3-203ENST00000537954 LRRC37A3O60309 1634 aa23.08■■□□□ 1.28
PGA3-203ENST00000537954 BCL9O00512 1426 aa23.08■■□□□ 1.28
PGA3-203ENST00000537954 CC2D1BQ5T0F9 858 aaKnown RBP23.07■■□□□ 1.28
PGA3-203ENST00000537954 PROM2Q8N271 834 aa23.05■■□□□ 1.28
PGA3-203ENST00000537954 SPON1Q9HCB6 807 aa23.05■■□□□ 1.28
PGA3-203ENST00000537954 MAP2P11137 1827 aaKnown RBP23.04■■□□□ 1.28
PGA3-203ENST00000537954 KCNQ2O43526 872 aa23.04■■□□□ 1.28
PGA3-203ENST00000537954 RGPD5Q99666 1765 aa23.04■■□□□ 1.28
PGA3-203ENST00000537954 SBF2Q86WG5 1849 aa23.03■■□□□ 1.28
PGA3-203ENST00000537954 CSB-PGBD3P0DP91 1061 aa23.02■■□□□ 1.28
PGA3-203ENST00000537954 MORC1Q86VD1 984 aa23.02■■□□□ 1.28
PGA3-203ENST00000537954 MAP3K19Q56UN5 1328 aa23.02■■□□□ 1.28
PGA3-203ENST00000537954 RGPD3A6NKT7 1758 aaPredicted RBP23.01■■□□□ 1.27
PGA3-203ENST00000537954 RGPD4Q7Z3J3 1758 aa23.01■■□□□ 1.27
PGA3-203ENST00000537954 EXOC5O00471 708 aa23.01■■□□□ 1.27
PGA3-203ENST00000537954 TNNT2P45379 298 aaPredicted RBP23.01■■□□□ 1.27
PGA3-203ENST00000537954 CNGB1Q14028 1251 aaPredicted RBP23.01■■□□□ 1.27
PGA3-203ENST00000537954 RRS1Q15050 365 aaKnown RBP23.01■■□□□ 1.27
PGA3-203ENST00000537954 ANO8Q9HCE9 1232 aaPredicted RBP23.01■■□□□ 1.27
PGA3-203ENST00000537954 ABCC6O95255 1503 aa23■■□□□ 1.27
PGA3-203ENST00000537954 SMG6Q86US8 1419 aaKnown RBP22.99■■□□□ 1.27
PGA3-203ENST00000537954 POLKQ9UBT6 870 aa22.98■■□□□ 1.27
PGA3-203ENST00000537954 EMILIN1Q9Y6C2 1016 aa22.98■■□□□ 1.27
PGA3-203ENST00000537954 WNK3Q9BYP7 1800 aa22.98■■□□□ 1.27
PGA3-203ENST00000537954 PPP1R1BQ9UD71 204 aaPredicted RBP22.97■■□□□ 1.27
PGA3-203ENST00000537954 PDGFDQ9GZP0 370 aaPredicted RBP22.96■■□□□ 1.27
PGA3-203ENST00000537954 RTL1A6NKG5 1358 aa22.94■■□□□ 1.26
PGA3-203ENST00000537954 TXNRD1Q16881 649 aa22.94■■□□□ 1.26
PGA3-203ENST00000537954 ERBB3P21860 1342 aa22.93■■□□□ 1.26
PGA3-203ENST00000537954 HOXC9P31274 260 aa22.93■■□□□ 1.26
PGA3-203ENST00000537954 IP6K1Q92551 441 aa22.93■■□□□ 1.26
PGA3-203ENST00000537954 TNS2Q63HR2 1409 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms