RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 CGNL1Q0VF96 1302 aa20.91■□□□□ 0.94
SRRM4-202ENST00000537597 KIF20BQ96Q89 1820 aa20.91■□□□□ 0.94
SRRM4-202ENST00000537597 POLR3GLQ9BT43 218 aa20.91■□□□□ 0.94
SRRM4-202ENST00000537597 RGS12O14924 1447 aa20.89■□□□□ 0.94
SRRM4-202ENST00000537597 SPATA31A1Q5TZJ5 1347 aa20.89■□□□□ 0.93
SRRM4-202ENST00000537597 IP6K1Q92551 441 aa20.89■□□□□ 0.93
SRRM4-202ENST00000537597 MAP3K19Q56UN5 1328 aa20.88■□□□□ 0.93
SRRM4-202ENST00000537597 LARP1Q6PKG0 1096 aaKnown RBP20.88■□□□□ 0.93
SRRM4-202ENST00000537597 NSD2O96028 1365 aa20.87■□□□□ 0.93
SRRM4-202ENST00000537597 NPC1L1Q9UHC9 1359 aa20.86■□□□□ 0.93
SRRM4-202ENST00000537597 RGPD5Q99666 1765 aa20.86■□□□□ 0.93
SRRM4-202ENST00000537597 KIF24Q5T7B8 1368 aa20.85■□□□□ 0.93
SRRM4-202ENST00000537597 LTN1O94822 1766 aa20.85■□□□□ 0.93
SRRM4-202ENST00000537597 SOX12O15370 315 aa20.85■□□□□ 0.93
SRRM4-202ENST00000537597 ANKRD26Q9UPS8 1709 aa20.84■□□□□ 0.93
SRRM4-202ENST00000537597 WDR17Q8IZU2 1322 aa20.84■□□□□ 0.93
SRRM4-202ENST00000537597 BARGINQ6ZT62 677 aa20.84■□□□□ 0.93
SRRM4-202ENST00000537597 ERBB3P21860 1342 aa20.83■□□□□ 0.93
SRRM4-202ENST00000537597 HOXC9P31274 260 aa20.83■□□□□ 0.93
SRRM4-202ENST00000537597 BLMP54132 1417 aaPredicted RBP20.83■□□□□ 0.93
SRRM4-202ENST00000537597 CRB1P82279 1406 aa20.83■□□□□ 0.93
SRRM4-202ENST00000537597 PEAK1Q9H792 1746 aa20.82■□□□□ 0.92
SRRM4-202ENST00000537597 POLKQ9UBT6 870 aa20.82■□□□□ 0.92
SRRM4-202ENST00000537597 KNSTRNQ9Y448 316 aa20.82■□□□□ 0.92
SRRM4-202ENST00000537597 THSD7AQ9UPZ6 1657 aa20.82■□□□□ 0.92
SRRM4-202ENST00000537597 RTL1A6NKG5 1358 aa20.82■□□□□ 0.92
SRRM4-202ENST00000537597 SOCS7O14512 581 aa20.81■□□□□ 0.92
SRRM4-202ENST00000537597 EVA1CP58658 441 aa20.81■□□□□ 0.92
SRRM4-202ENST00000537597 RRS1Q15050 365 aaKnown RBP20.81■□□□□ 0.92
SRRM4-202ENST00000537597 STRN4Q9NRL3 753 aa20.81■□□□□ 0.92
SRRM4-202ENST00000537597 THRAP3Q9Y2W1 955 aaKnown RBP20.81■□□□□ 0.92
SRRM4-202ENST00000537597 CARD10Q9BWT7 1032 aa20.8■□□□□ 0.92
SRRM4-202ENST00000537597 SEPT12Q8IYM1 358 aa20.79■□□□□ 0.92
SRRM4-202ENST00000537597 SMG6Q86US8 1419 aaKnown RBP20.78■□□□□ 0.92
SRRM4-202ENST00000537597 INSRP06213 1382 aa20.78■□□□□ 0.92
SRRM4-202ENST00000537597 TCP11L2Q8N4U5 519 aa20.78■□□□□ 0.92
SRRM4-202ENST00000537597 EMILIN1Q9Y6C2 1016 aa20.78■□□□□ 0.92
SRRM4-202ENST00000537597 DISP2A7MBM2 1401 aa20.78■□□□□ 0.92
SRRM4-202ENST00000537597 FAM98CQ17RN3 349 aaKnown RBP20.77■□□□□ 0.92
SRRM4-202ENST00000537597 ANKRD24Q8TF21 1146 aa20.77■□□□□ 0.92
SRRM4-202ENST00000537597 MAP2P11137 1827 aaKnown RBP20.76■□□□□ 0.91
SRRM4-202ENST00000537597 ZBTB7CA1YPR0 619 aa20.76■□□□□ 0.91
SRRM4-202ENST00000537597 HSP90AB2PQ58FF8 381 aa20.76■□□□□ 0.91
SRRM4-202ENST00000537597 BRWD3Q6RI45 1802 aa20.76■□□□□ 0.91
SRRM4-202ENST00000537597 FLT4P35916 1363 aa20.75■□□□□ 0.91
SRRM4-202ENST00000537597 EP400Q96L91 3159 aa20.75■□□□□ 0.91
SRRM4-202ENST00000537597 AMPHP49418 695 aa20.74■□□□□ 0.91
SRRM4-202ENST00000537597 CCDC9Q9Y3X0 531 aaKnown RBP20.74■□□□□ 0.91
SRRM4-202ENST00000537597 NCAPD2Q15021 1401 aa20.73■□□□□ 0.91
SRRM4-202ENST00000537597 TOM1L2Q6ZVM7 507 aa20.73■□□□□ 0.91
SRRM4-202ENST00000537597 MORC1Q86VD1 984 aa20.72■□□□□ 0.91
SRRM4-202ENST00000537597 FAM208AQ9UK61 1670 aaKnown RBP20.7■□□□□ 0.91
SRRM4-202ENST00000537597 PARP4Q9UKK3 1724 aaKnown RBP20.7■□□□□ 0.9
SRRM4-202ENST00000537597 NBPF6Q5VWK0 638 aa20.7■□□□□ 0.9
SRRM4-202ENST00000537597 NBPF4Q96M43 638 aa20.7■□□□□ 0.9
SRRM4-202ENST00000537597 CDCA7Q9BWT1 371 aaPredicted RBP20.69■□□□□ 0.9
SRRM4-202ENST00000537597 USP35Q9P2H5 1018 aa20.69■□□□□ 0.9
SRRM4-202ENST00000537597 KRT27Q7Z3Y8 459 aa20.68■□□□□ 0.9
SRRM4-202ENST00000537597 UPF1Q92900 1129 aaKnown RBP eCLIP20.68■□□□□ 0.9
SRRM4-202ENST00000537597 WNK3Q9BYP7 1800 aa20.68■□□□□ 0.9
SRRM4-202ENST00000537597 TNNT2P45379 298 aaPredicted RBP20.67■□□□□ 0.9
SRRM4-202ENST00000537597 CC2D1BQ5T0F9 858 aaKnown RBP20.67■□□□□ 0.9
SRRM4-202ENST00000537597 RGPD2P0DJD1 1756 aa20.67■□□□□ 0.9
SRRM4-202ENST00000537597 CSB-PGBD3P0DP91 1061 aa20.66■□□□□ 0.9
SRRM4-202ENST00000537597 NLRP2Q9NX02 1062 aa20.66■□□□□ 0.9
SRRM4-202ENST00000537597 EIF4A2Q14240 407 aaKnown RBP20.65■□□□□ 0.9
SRRM4-202ENST00000537597 BCL9O00512 1426 aa20.64■□□□□ 0.89
SRRM4-202ENST00000537597 LTV1Q96GA3 475 aaPredicted RBP20.64■□□□□ 0.89
SRRM4-202ENST00000537597 MTHFSP49914 203 aa20.63■□□□□ 0.89
SRRM4-202ENST00000537597 DDX10Q13206 875 aaKnown RBP20.63■□□□□ 0.89
SRRM4-202ENST00000537597 EYA1Q99502 592 aa20.63■□□□□ 0.89
SRRM4-202ENST00000537597 LRRC37A3O60309 1634 aa20.63■□□□□ 0.89
SRRM4-202ENST00000537597 IL2RBP14784 551 aa20.62■□□□□ 0.89
SRRM4-202ENST00000537597 IL13P35225 146 aa20.62■□□□□ 0.89
SRRM4-202ENST00000537597 PARD3Q8TEW0 1356 aa20.61■□□□□ 0.89
SRRM4-202ENST00000537597 MARCH10Q8NA82 808 aaPredicted RBP20.61■□□□□ 0.89
SRRM4-202ENST00000537597 COL3A1P02461 1466 aaPredicted RBP20.6■□□□□ 0.89
SRRM4-202ENST00000537597 IGSF1Q8N6C5 1336 aa20.59■□□□□ 0.89
SRRM4-202ENST00000537597 ZNF316A6NFI3 1004 aaPredicted RBP20.59■□□□□ 0.89
SRRM4-202ENST00000537597 PPM1GO15355 546 aaPredicted RBP20.59■□□□□ 0.89
SRRM4-202ENST00000537597 DDB1Q16531 1140 aa20.59■□□□□ 0.89
SRRM4-202ENST00000537597 RGPD1P0DJD0 1748 aa20.58■□□□□ 0.89
SRRM4-202ENST00000537597 MEGF6O75095 1541 aa20.58■□□□□ 0.89
SRRM4-202ENST00000537597 EXOC5O00471 708 aa20.58■□□□□ 0.89
SRRM4-202ENST00000537597 FAM182BQ5T319 152 aa20.58■□□□□ 0.89
SRRM4-202ENST00000537597 OVOS2A0A0G2JMS6 1433 aa20.58■□□□□ 0.88
SRRM4-202ENST00000537597 TNS2Q63HR2 1409 aa20.58■□□□□ 0.88
SRRM4-202ENST00000537597 PPP2R1AP30153 589 aa20.57■□□□□ 0.88
SRRM4-202ENST00000537597 CCDC125Q86Z20 511 aa20.57■□□□□ 0.88
SRRM4-202ENST00000537597 PLEKHG2Q9H7P9 1386 aa20.57■□□□□ 0.88
SRRM4-202ENST00000537597 PDE3BQ13370 1112 aa20.56■□□□□ 0.88
SRRM4-202ENST00000537597 FAM196AQ6ZSG2 479 aa20.56■□□□□ 0.88
SRRM4-202ENST00000537597 USHBP1Q8N6Y0 703 aa20.56■□□□□ 0.88
SRRM4-202ENST00000537597 KDRP35968 1356 aa20.55■□□□□ 0.88
SRRM4-202ENST00000537597 SHANK3Q9BYB0 1731 aa20.54■□□□□ 0.88
SRRM4-202ENST00000537597 A0A0G2JS52 829 aa20.52■□□□□ 0.88
SRRM4-202ENST00000537597 MYT1Q01538 1121 aa20.52■□□□□ 0.88
SRRM4-202ENST00000537597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.52■□□□□ 0.88
SRRM4-202ENST00000537597 ZCRB1Q8TBF4 217 aaKnown RBP20.51■□□□□ 0.87
SRRM4-202ENST00000537597 RALBP1Q15311 655 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms