RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 RBM42Q9BTD8 480 aaKnown RBP10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 ABCC2Q92887 1545 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 KMT5BQ4FZB7 885 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 MNS1Q8NEH6 495 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 TMX1Q9H3N1 280 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 DEF6Q9H4E7 631 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 PYCARDQ9ULZ3 195 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 KIF1CO43896 1103 aaKnown RBP10.25□□□□□ -0.77
SRGAP1-202ENST00000537556 HSP90AB3PQ58FF7 597 aa10.25□□□□□ -0.77
SRGAP1-202ENST00000537556 EGFL6Q8IUX8 553 aa10.25□□□□□ -0.77
SRGAP1-202ENST00000537556 CCDC146Q8IYE0 955 aa10.25□□□□□ -0.77
SRGAP1-202ENST00000537556 GPATCH11Q8N954 259 aa10.25□□□□□ -0.77
SRGAP1-202ENST00000537556 NSFL1CQ9UNZ2 370 aaKnown RBP10.25□□□□□ -0.77
SRGAP1-202ENST00000537556 JRKLQ9Y4A0 524 aa10.25□□□□□ -0.77
SRGAP1-202ENST00000537556 MAGI1Q96QZ7 1491 aaPredicted RBP10.25□□□□□ -0.77
SRGAP1-202ENST00000537556 CHD1O14646 1710 aa10.25□□□□□ -0.77
SRGAP1-202ENST00000537556 AK9Q5TCS8 1911 aa10.25□□□□□ -0.77
SRGAP1-202ENST00000537556 A0A1B0GUL7 405 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 TNNT1P13805 278 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 TPM4P67936 248 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 SYT10Q6XYQ8 523 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 DONSONQ9NYP3 566 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 ABCA10Q8WWZ4 1543 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 PZPP20742 1482 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 MCCP23508 829 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 RBM6P78332 1123 aaKnown RBP10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 PKP1Q13835 747 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 CCDC91Q7Z6B0 441 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 KNSTRNQ9Y448 316 aa10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 COL17A1Q9UMD9 1497 aaPredicted RBP10.24□□□□□ -0.77
SRGAP1-202ENST00000537556 PIK3C2GO75747 1445 aa10.23□□□□□ -0.77
SRGAP1-202ENST00000537556 POLKQ9UBT6 870 aa10.23□□□□□ -0.77
SRGAP1-202ENST00000537556 YEATS2Q9ULM3 1422 aa10.23□□□□□ -0.77
SRGAP1-202ENST00000537556 KRBA2Q6ZNG9 492 aa10.23□□□□□ -0.77
SRGAP1-202ENST00000537556 KCNF1Q9H3M0 494 aa10.23□□□□□ -0.77
SRGAP1-202ENST00000537556 PBRM1Q86U86 1689 aa10.23□□□□□ -0.77
SRGAP1-202ENST00000537556 ST18O60284 1047 aa10.23□□□□□ -0.77
SRGAP1-202ENST00000537556 SRPK2P78362 688 aaKnown RBP10.23□□□□□ -0.77
SRGAP1-202ENST00000537556 EP400NLQ6ZTU2 488 aa10.23□□□□□ -0.77
SRGAP1-202ENST00000537556 KDM2AQ9Y2K7 1162 aa10.23□□□□□ -0.77
SRGAP1-202ENST00000537556 NBPF20Q3BBV1 942 aa10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 C16orf45Q96MC5 204 aaPredicted RBP10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 TOMM22Q9NS69 142 aa10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 CFAP65Q6ZU64 1925 aaKnown RBP10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 TMF1P82094 1093 aa10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 PLCB2Q00722 1185 aa10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 NUCB1Q02818 461 aa10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 PKD2Q13563 968 aa10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 ZKSCAN2Q63HK3 967 aa10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 DZIP1LQ8IYY4 767 aaKnown RBP10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 ERO1AQ96HE7 468 aa10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 ZNF446Q9NWS9 450 aa10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 DDX19BQ9UMR2 479 aa10.22□□□□□ -0.77
SRGAP1-202ENST00000537556 GRIN2BQ13224 1484 aa10.21□□□□□ -0.77
SRGAP1-202ENST00000537556 NAA30Q147X3 362 aaPredicted RBP10.21□□□□□ -0.77
SRGAP1-202ENST00000537556 TTC31Q49AM3 519 aaPredicted RBP10.21□□□□□ -0.77
SRGAP1-202ENST00000537556 ZDHHC9Q9Y397 364 aa10.21□□□□□ -0.77
SRGAP1-202ENST00000537556 V9GYY5 206 aaPredicted RBP10.21□□□□□ -0.77
SRGAP1-202ENST00000537556 GPRASP1Q5JY77 1395 aa10.21□□□□□ -0.78
SRGAP1-202ENST00000537556 ZSCAN26Q16670 478 aa10.21□□□□□ -0.78
SRGAP1-202ENST00000537556 FBXO38Q6PIJ6 1188 aa10.21□□□□□ -0.78
SRGAP1-202ENST00000537556 CCDC191Q8NCU4 936 aa10.21□□□□□ -0.78
SRGAP1-202ENST00000537556 IFT57Q9NWB7 429 aa10.21□□□□□ -0.78
SRGAP1-202ENST00000537556 DAPK1P53355 1430 aa10.21□□□□□ -0.78
SRGAP1-202ENST00000537556 GRIN2AQ12879 1464 aa10.21□□□□□ -0.78
SRGAP1-202ENST00000537556 TRIM66O15016 1216 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 GYS2P54840 703 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 CCDC183Q5T5S1 534 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 TBC1D9Q6ZT07 1266 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 MED4Q9NPJ6 270 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 ST7Q9NRC1 585 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 RAD54L2Q9Y4B4 1467 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 ATP2B1P20020 1258 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 TDO2P48775 406 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 SRLQ86TD4 932 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 DRC1Q96MC2 740 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 LRRFIP2Q9Y608 721 aaKnown RBP10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 SCAF11Q99590 1463 aaKnown RBP10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 HCLS1P14317 486 aaPredicted RBP10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 CHD1LQ86WJ1 897 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 CXorf56Q9H5V9 222 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 TNNQ9UQP3 1299 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 DMRT2Q9Y5R5 561 aa10.2□□□□□ -0.78
SRGAP1-202ENST00000537556 NEK11Q8NG66 645 aa10.19□□□□□ -0.78
SRGAP1-202ENST00000537556 RIMBP3CA6NJZ7 1639 aa10.19□□□□□ -0.78
SRGAP1-202ENST00000537556 RIMBP3BA6NNM3 1639 aa10.19□□□□□ -0.78
SRGAP1-202ENST00000537556 RIMBP3Q9UFD9 1639 aa10.19□□□□□ -0.78
SRGAP1-202ENST00000537556 TPD52L1Q16890 204 aaPredicted RBP10.19□□□□□ -0.78
SRGAP1-202ENST00000537556 CEP135Q66GS9 1140 aa10.19□□□□□ -0.78
SRGAP1-202ENST00000537556 GOLGA5Q8TBA6 731 aa10.19□□□□□ -0.78
SRGAP1-202ENST00000537556 LNPKQ9C0E8 428 aa10.19□□□□□ -0.78
SRGAP1-202ENST00000537556 CDC45O75419 566 aa10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 CALRP27797 417 aaKnown RBP10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 RTF1Q92541 710 aaKnown RBP10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 RAI14Q9P0K7 980 aa10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 RRP15Q9Y3B9 282 aaKnown RBP10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 TULP1O00294 542 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms