RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 POLR3AO14802 1390 aaPredicted RBP22.66■■□□□ 1.22
LPCAT3-206ENST00000537179 DDB1Q16531 1140 aa22.66■■□□□ 1.22
LPCAT3-206ENST00000537179 TXNRD1Q16881 649 aa22.66■■□□□ 1.22
LPCAT3-206ENST00000537179 GPR162Q16538 588 aa22.65■■□□□ 1.22
LPCAT3-206ENST00000537179 NUDT16Q96DE0 195 aaKnown RBP22.64■■□□□ 1.21
LPCAT3-206ENST00000537179 AATKQ6ZMQ8 1374 aa22.63■■□□□ 1.21
LPCAT3-206ENST00000537179 COL24A1Q17RW2 1714 aa22.63■■□□□ 1.21
LPCAT3-206ENST00000537179 NHSQ6T4R5 1651 aa22.63■■□□□ 1.21
LPCAT3-206ENST00000537179 MARCH10Q8NA82 808 aaPredicted RBP22.62■■□□□ 1.21
LPCAT3-206ENST00000537179 MPHOSPH9Q99550 1183 aa22.62■■□□□ 1.21
LPCAT3-206ENST00000537179 COL18A1P39060 1754 aa22.62■■□□□ 1.21
LPCAT3-206ENST00000537179 ABTB2Q8N961 1025 aa22.61■■□□□ 1.21
LPCAT3-206ENST00000537179 ACEP12821 1306 aa22.6■■□□□ 1.21
LPCAT3-206ENST00000537179 RGPD5Q99666 1765 aa22.59■■□□□ 1.21
LPCAT3-206ENST00000537179 QSER1Q2KHR3 1735 aa22.59■■□□□ 1.21
LPCAT3-206ENST00000537179 GCP02774 474 aa22.58■■□□□ 1.21
LPCAT3-206ENST00000537179 SLIT3O75094 1523 aa22.56■■□□□ 1.2
LPCAT3-206ENST00000537179 BTAF1O14981 1849 aa22.55■■□□□ 1.2
LPCAT3-206ENST00000537179 TUBGCP6Q96RT7 1819 aa22.54■■□□□ 1.2
LPCAT3-206ENST00000537179 TOM1L2Q6ZVM7 507 aa22.54■■□□□ 1.2
LPCAT3-206ENST00000537179 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
LPCAT3-206ENST00000537179 ZBTB7CA1YPR0 619 aa22.53■■□□□ 1.2
LPCAT3-206ENST00000537179 NLRP13Q86W25 1043 aa22.53■■□□□ 1.2
LPCAT3-206ENST00000537179 KLHL34Q8N239 644 aa22.52■■□□□ 1.2
LPCAT3-206ENST00000537179 ATP10DQ9P241 1426 aa22.5■■□□□ 1.19
LPCAT3-206ENST00000537179 PLEKHG3A1L390 1219 aa22.5■■□□□ 1.19
LPCAT3-206ENST00000537179 CDK19Q9BWU1 502 aa22.5■■□□□ 1.19
LPCAT3-206ENST00000537179 WDR17Q8IZU2 1322 aa22.5■■□□□ 1.19
LPCAT3-206ENST00000537179 ZNF827Q17R98 1081 aa22.49■■□□□ 1.19
LPCAT3-206ENST00000537179 CDCA7Q9BWT1 371 aaPredicted RBP22.49■■□□□ 1.19
LPCAT3-206ENST00000537179 CCDC61Q9Y6R9 512 aa22.49■■□□□ 1.19
LPCAT3-206ENST00000537179 TRPM1Q7Z4N2 1603 aa22.49■■□□□ 1.19
LPCAT3-206ENST00000537179 PIK3C2AO00443 1686 aa22.49■■□□□ 1.19
LPCAT3-206ENST00000537179 TNS2Q63HR2 1409 aa22.48■■□□□ 1.19
LPCAT3-206ENST00000537179 HSPA6P17066 643 aa22.48■■□□□ 1.19
LPCAT3-206ENST00000537179 NLGN2Q8NFZ4 835 aa22.47■■□□□ 1.19
LPCAT3-206ENST00000537179 ABCC6O95255 1503 aa22.46■■□□□ 1.19
LPCAT3-206ENST00000537179 KAT6BQ8WYB5 2073 aa22.45■■□□□ 1.18
LPCAT3-206ENST00000537179 YBX3P16989 372 aaKnown RBP eCLIP22.44■■□□□ 1.18
LPCAT3-206ENST00000537179 CPSF1Q10570 1443 aaKnown RBP22.44■■□□□ 1.18
LPCAT3-206ENST00000537179 AXIN2Q9Y2T1 843 aa22.44■■□□□ 1.18
LPCAT3-206ENST00000537179 QRICH2Q9H0J4 1663 aa22.43■■□□□ 1.18
LPCAT3-206ENST00000537179 PPIP5K1Q6PFW1 1433 aa22.43■■□□□ 1.18
LPCAT3-206ENST00000537179 POLD1P28340 1107 aa22.42■■□□□ 1.18
LPCAT3-206ENST00000537179 BRD4O60885 1362 aaPredicted RBP22.41■■□□□ 1.18
LPCAT3-206ENST00000537179 EXOC5O00471 708 aa22.4■■□□□ 1.18
LPCAT3-206ENST00000537179 SLC16A10Q8TF71 515 aa22.4■■□□□ 1.18
LPCAT3-206ENST00000537179 ACSBG1Q96GR2 724 aa22.4■■□□□ 1.18
LPCAT3-206ENST00000537179 CARD10Q9BWT7 1032 aa22.4■■□□□ 1.18
LPCAT3-206ENST00000537179 GRIN3BO60391 1043 aa22.39■■□□□ 1.17
LPCAT3-206ENST00000537179 GPBP1L1Q9HC44 474 aaPredicted RBP22.39■■□□□ 1.17
LPCAT3-206ENST00000537179 LRRC4BQ9NT99 713 aa22.39■■□□□ 1.17
LPCAT3-206ENST00000537179 KDM2AQ9Y2K7 1162 aa22.39■■□□□ 1.17
LPCAT3-206ENST00000537179 USP6P35125 1406 aa22.39■■□□□ 1.17
LPCAT3-206ENST00000537179 ADCY9O60503 1353 aa22.38■■□□□ 1.17
LPCAT3-206ENST00000537179 NLRP6P59044 892 aa22.38■■□□□ 1.17
LPCAT3-206ENST00000537179 AKT1S1Q96B36 256 aa22.37■■□□□ 1.17
LPCAT3-206ENST00000537179 PNPLA7Q6ZV29 1317 aa22.36■■□□□ 1.17
LPCAT3-206ENST00000537179 CCDC7Q96M83 1385 aa22.36■■□□□ 1.17
LPCAT3-206ENST00000537179 CSB-PGBD3P0DP91 1061 aa22.35■■□□□ 1.17
LPCAT3-206ENST00000537179 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
LPCAT3-206ENST00000537179 KIAA1210Q9ULL0 1709 aa22.33■■□□□ 1.17
LPCAT3-206ENST00000537179 NFAT5O94916 1531 aa22.32■■□□□ 1.16
LPCAT3-206ENST00000537179 LY75O60449 1722 aa22.32■■□□□ 1.16
LPCAT3-206ENST00000537179 ARHGEF25Q86VW2 580 aa22.32■■□□□ 1.16
LPCAT3-206ENST00000537179 ZNF526Q8TF50 670 aaPredicted RBP22.32■■□□□ 1.16
LPCAT3-206ENST00000537179 SRPK2P78362 688 aaKnown RBP22.29■■□□□ 1.16
LPCAT3-206ENST00000537179 CABP2Q9NPB3 220 aa22.27■■□□□ 1.16
LPCAT3-206ENST00000537179 SLC27A3Q5K4L6 730 aa22.26■■□□□ 1.15
LPCAT3-206ENST00000537179 TFCP2L1Q9NZI6 479 aa22.26■■□□□ 1.15
LPCAT3-206ENST00000537179 DOT1LQ8TEK3 1739 aa22.26■■□□□ 1.15
LPCAT3-206ENST00000537179 LTN1O94822 1766 aa22.25■■□□□ 1.15
LPCAT3-206ENST00000537179 SOX12O15370 315 aa22.25■■□□□ 1.15
LPCAT3-206ENST00000537179 STAC3Q96MF2 364 aa22.25■■□□□ 1.15
LPCAT3-206ENST00000537179 WDR90Q96KV7 1748 aa22.24■■□□□ 1.15
LPCAT3-206ENST00000537179 KCNH5Q8NCM2 988 aa22.23■■□□□ 1.15
LPCAT3-206ENST00000537179 CABP1Q9NZU7 370 aa22.23■■□□□ 1.15
LPCAT3-206ENST00000537179 KCNQ4P56696 695 aa22.22■■□□□ 1.15
LPCAT3-206ENST00000537179 PCNTO95613 3336 aa22.21■■□□□ 1.15
LPCAT3-206ENST00000537179 KIF3CO14782 793 aa22.21■■□□□ 1.15
LPCAT3-206ENST00000537179 APLP1P51693 650 aa22.21■■□□□ 1.15
LPCAT3-206ENST00000537179 DNAJC5GQ8N7S2 189 aa22.2■■□□□ 1.14
LPCAT3-206ENST00000537179 IL2RBP14784 551 aa22.19■■□□□ 1.14
LPCAT3-206ENST00000537179 USP54Q70EL1 1684 aa22.18■■□□□ 1.14
LPCAT3-206ENST00000537179 ERBB3P21860 1342 aa22.18■■□□□ 1.14
LPCAT3-206ENST00000537179 CAPN15O75808 1086 aa22.18■■□□□ 1.14
LPCAT3-206ENST00000537179 C5P01031 1676 aa22.17■■□□□ 1.14
LPCAT3-206ENST00000537179 TTC21BQ7Z4L5 1316 aa22.17■■□□□ 1.14
LPCAT3-206ENST00000537179 CENPJQ9HC77 1338 aaPredicted RBP22.17■■□□□ 1.14
LPCAT3-206ENST00000537179 MSL1Q68DK7 614 aa22.16■■□□□ 1.14
LPCAT3-206ENST00000537179 NLRP2Q9NX02 1062 aa22.16■■□□□ 1.14
LPCAT3-206ENST00000537179 COL13A1Q5TAT6 717 aaPredicted RBP22.15■■□□□ 1.14
LPCAT3-206ENST00000537179 CD2APQ9Y5K6 639 aa22.15■■□□□ 1.14
LPCAT3-206ENST00000537179 CICQ96RK0 1608 aaPredicted RBP22.15■■□□□ 1.14
LPCAT3-206ENST00000537179 MON2Q7Z3U7 1717 aa22.14■■□□□ 1.14
LPCAT3-206ENST00000537179 MSH5O43196 834 aa22.14■■□□□ 1.13
LPCAT3-206ENST00000537179 COL23A1Q86Y22 540 aaPredicted RBP22.14■■□□□ 1.13
LPCAT3-206ENST00000537179 NSD2O96028 1365 aa22.13■■□□□ 1.13
LPCAT3-206ENST00000537179 FAM208AQ9UK61 1670 aaKnown RBP22.13■■□□□ 1.13
LPCAT3-206ENST00000537179 TAF1LQ8IZX4 1826 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms