RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 ALS2Q96Q42 1657 aa8.7□□□□□ -1.02
CDCA3-205ENST00000535871 TOM1O60784 492 aa8.7□□□□□ -1.02
CDCA3-205ENST00000535871 KRT28Q7Z3Y7 464 aa8.7□□□□□ -1.02
CDCA3-205ENST00000535871 GGNBP2Q9H3C7 697 aa8.7□□□□□ -1.02
CDCA3-205ENST00000535871 PLEKHG2Q9H7P9 1386 aa8.7□□□□□ -1.02
CDCA3-205ENST00000535871 SLIT3O75094 1523 aa8.7□□□□□ -1.02
CDCA3-205ENST00000535871 NHSL1Q5SYE7 1610 aa8.69□□□□□ -1.02
CDCA3-205ENST00000535871 NUTM2FA1L443 756 aa8.69□□□□□ -1.02
CDCA3-205ENST00000535871 FOXO3O43524 673 aa8.69□□□□□ -1.02
CDCA3-205ENST00000535871 NME9Q86XW9 330 aa8.69□□□□□ -1.02
CDCA3-205ENST00000535871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDCA3-205ENST00000535871 ABTB2Q8N961 1025 aa8.69□□□□□ -1.02
CDCA3-205ENST00000535871 RBM33Q96EV2 1170 aaKnown RBP8.69□□□□□ -1.02
CDCA3-205ENST00000535871 PNNQ9H307 717 aaKnown RBP8.69□□□□□ -1.02
CDCA3-205ENST00000535871 GTF3C3Q9Y5Q9 886 aa8.69□□□□□ -1.02
CDCA3-205ENST00000535871 SPATA31A3Q5VYP0 1347 aa8.69□□□□□ -1.02
CDCA3-205ENST00000535871 TNS3Q68CZ2 1445 aa8.69□□□□□ -1.02
CDCA3-205ENST00000535871 MTHFSP49914 203 aa8.68□□□□□ -1.02
CDCA3-205ENST00000535871 NLRP6P59044 892 aa8.68□□□□□ -1.02
CDCA3-205ENST00000535871 POLKQ9UBT6 870 aa8.68□□□□□ -1.02
CDCA3-205ENST00000535871 NUDCQ9Y266 331 aa8.68□□□□□ -1.02
CDCA3-205ENST00000535871 CPDO75976 1380 aa8.67□□□□□ -1.02
CDCA3-205ENST00000535871 COL3A1P02461 1466 aaPredicted RBP8.67□□□□□ -1.02
CDCA3-205ENST00000535871 MAP2P11137 1827 aaKnown RBP8.67□□□□□ -1.02
CDCA3-205ENST00000535871 FLT4P35916 1363 aa8.67□□□□□ -1.02
CDCA3-205ENST00000535871 MARF1Q9Y4F3 1742 aaKnown RBP8.66□□□□□ -1.02
CDCA3-205ENST00000535871 NFAT5O94916 1531 aa8.66□□□□□ -1.02
CDCA3-205ENST00000535871 BLMP54132 1417 aaPredicted RBP8.66□□□□□ -1.02
CDCA3-205ENST00000535871 GSE1Q14687 1217 aa8.66□□□□□ -1.02
CDCA3-205ENST00000535871 WDR43Q15061 677 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDCA3-205ENST00000535871 LRRC59Q96AG4 307 aaKnown RBP8.66□□□□□ -1.02
CDCA3-205ENST00000535871 GCP02774 474 aa8.65□□□□□ -1.02
CDCA3-205ENST00000535871 ERICH6Q7L0X2 663 aa8.65□□□□□ -1.02
CDCA3-205ENST00000535871 DIAPH1O60610 1272 aaKnown RBP8.64□□□□□ -1.03
CDCA3-205ENST00000535871 PAK3O75914 559 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-205ENST00000535871 FCHSD2O94868 740 aa8.64□□□□□ -1.03
CDCA3-205ENST00000535871 CCDC184Q52MB2 194 aa8.64□□□□□ -1.03
CDCA3-205ENST00000535871 ARHGEF25Q86VW2 580 aa8.64□□□□□ -1.03
CDCA3-205ENST00000535871 CERKQ8TCT0 537 aa8.64□□□□□ -1.03
CDCA3-205ENST00000535871 RNF25Q96BH1 459 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-205ENST00000535871 ROBO1Q9Y6N7 1651 aa8.63□□□□□ -1.03
CDCA3-205ENST00000535871 MAP3K19Q56UN5 1328 aa8.63□□□□□ -1.03
CDCA3-205ENST00000535871 ZBED9Q6R2W3 1325 aa8.63□□□□□ -1.03
CDCA3-205ENST00000535871 COL22A1Q8NFW1 1626 aaPredicted RBP8.63□□□□□ -1.03
CDCA3-205ENST00000535871 IP6K1Q92551 441 aa8.63□□□□□ -1.03
CDCA3-205ENST00000535871 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
CDCA3-205ENST00000535871 KDRP35968 1356 aa8.62□□□□□ -1.03
CDCA3-205ENST00000535871 IL13P35225 146 aa8.62□□□□□ -1.03
CDCA3-205ENST00000535871 PDE3BQ13370 1112 aa8.62□□□□□ -1.03
CDCA3-205ENST00000535871 CRYBG1Q9Y4K1 1723 aa8.62□□□□□ -1.03
CDCA3-205ENST00000535871 RIOK3O14730 519 aaKnown RBP8.61□□□□□ -1.03
CDCA3-205ENST00000535871 CENPBP07199 599 aaPredicted RBP8.61□□□□□ -1.03
CDCA3-205ENST00000535871 TNNT2P45379 298 aaPredicted RBP8.61□□□□□ -1.03
CDCA3-205ENST00000535871 AMPHP49418 695 aa8.61□□□□□ -1.03
CDCA3-205ENST00000535871 NKX1-1Q15270 411 aaPredicted RBP8.61□□□□□ -1.03
CDCA3-205ENST00000535871 CCDC27Q2M243 656 aa8.61□□□□□ -1.03
CDCA3-205ENST00000535871 FAM9BQ8IZU0 186 aa8.61□□□□□ -1.03
CDCA3-205ENST00000535871 ZRANB1Q9UGI0 708 aa8.61□□□□□ -1.03
CDCA3-205ENST00000535871 ADAMTS8Q9UP79 889 aa8.61□□□□□ -1.03
CDCA3-205ENST00000535871 NCAPD2Q15021 1401 aa8.61□□□□□ -1.03
CDCA3-205ENST00000535871 GTPBP6O43824 516 aaPredicted RBP8.6□□□□□ -1.03
CDCA3-205ENST00000535871 HOXC9P31274 260 aa8.6□□□□□ -1.03
CDCA3-205ENST00000535871 DSG3P32926 999 aa8.6□□□□□ -1.03
CDCA3-205ENST00000535871 RUNDC1Q96C34 613 aa8.6□□□□□ -1.03
CDCA3-205ENST00000535871 EMILIN1Q9Y6C2 1016 aa8.6□□□□□ -1.03
CDCA3-205ENST00000535871 COL16A1Q07092 1604 aaPredicted RBP8.6□□□□□ -1.03
CDCA3-205ENST00000535871 RGPD1P0DJD0 1748 aa8.6□□□□□ -1.03
CDCA3-205ENST00000535871 FAM208AQ9UK61 1670 aaKnown RBP8.59□□□□□ -1.03
CDCA3-205ENST00000535871 IGSF1Q8N6C5 1336 aa8.59□□□□□ -1.03
CDCA3-205ENST00000535871 LTN1O94822 1766 aa8.59□□□□□ -1.03
CDCA3-205ENST00000535871 NEFMP07197 916 aa8.59□□□□□ -1.03
CDCA3-205ENST00000535871 RRS1Q15050 365 aaKnown RBP8.59□□□□□ -1.03
CDCA3-205ENST00000535871 PEAK1Q9H792 1746 aa8.59□□□□□ -1.03
CDCA3-205ENST00000535871 UBAP1LF5GYI3 381 aa8.58□□□□□ -1.04
CDCA3-205ENST00000535871 STK25O00506 426 aa8.58□□□□□ -1.04
CDCA3-205ENST00000535871 U2AF1L5P0DN76 240 aaPredicted RBP8.58□□□□□ -1.04
CDCA3-205ENST00000535871 U2AF1Q01081 240 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDCA3-205ENST00000535871 EIF4A2Q14240 407 aaKnown RBP8.58□□□□□ -1.04
CDCA3-205ENST00000535871 DCAF8Q5TAQ9 597 aa8.58□□□□□ -1.04
CDCA3-205ENST00000535871 PLEKHF1Q96S99 279 aa8.58□□□□□ -1.04
CDCA3-205ENST00000535871 COL18A1P39060 1754 aa8.58□□□□□ -1.04
CDCA3-205ENST00000535871 PHLPP1O60346 1717 aa8.57□□□□□ -1.04
CDCA3-205ENST00000535871 CAMTA1Q9Y6Y1 1673 aa8.57□□□□□ -1.04
CDCA3-205ENST00000535871 HNRNPUQ00839 825 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDCA3-205ENST00000535871 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
CDCA3-205ENST00000535871 CNGB1Q14028 1251 aaPredicted RBP8.57□□□□□ -1.04
CDCA3-205ENST00000535871 HSP90AB2PQ58FF8 381 aa8.57□□□□□ -1.04
CDCA3-205ENST00000535871 RSPH6AQ9H0K4 717 aa8.57□□□□□ -1.04
CDCA3-205ENST00000535871 JCADQ9P266 1359 aa8.57□□□□□ -1.04
CDCA3-205ENST00000535871 ABCA3Q99758 1704 aa8.57□□□□□ -1.04
CDCA3-205ENST00000535871 ERBB3P21860 1342 aa8.56□□□□□ -1.04
CDCA3-205ENST00000535871 SPATA31A6Q5VVP1 1343 aa8.56□□□□□ -1.04
CDCA3-205ENST00000535871 ZNF521Q96K83 1311 aa8.56□□□□□ -1.04
CDCA3-205ENST00000535871 PPM1GO15355 546 aaPredicted RBP8.56□□□□□ -1.04
CDCA3-205ENST00000535871 HTATSF1O43719 755 aaKnown RBP8.56□□□□□ -1.04
CDCA3-205ENST00000535871 CALD1Q05682 793 aaKnown RBP8.56□□□□□ -1.04
CDCA3-205ENST00000535871 LMOD3Q0VAK6 560 aa8.56□□□□□ -1.04
CDCA3-205ENST00000535871 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
CDCA3-205ENST00000535871 LMOD2Q6P5Q4 547 aa8.56□□□□□ -1.04
CDCA3-205ENST00000535871 ARXQ96QS3 562 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms