RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 C6orf118Q5T5N4 469 aa7.15□□□□□ -1.26
SPARCL1-208ENST00000535835 PROCA1Q8NCQ7 364 aaPredicted RBP7.15□□□□□ -1.26
SPARCL1-208ENST00000535835 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.15□□□□□ -1.26
SPARCL1-208ENST00000535835 GPBP1L1Q9HC44 474 aaPredicted RBP7.15□□□□□ -1.26
SPARCL1-208ENST00000535835 PPFIA3O75145 1194 aa7.14□□□□□ -1.27
SPARCL1-208ENST00000535835 FOXK2Q01167 660 aa7.14□□□□□ -1.27
SPARCL1-208ENST00000535835 SOS2Q07890 1332 aaPredicted RBP7.14□□□□□ -1.27
SPARCL1-208ENST00000535835 LINC00528Q8N1L1 170 aa7.14□□□□□ -1.27
SPARCL1-208ENST00000535835 GPKOWQ92917 476 aaPredicted RBP eCLIP7.14□□□□□ -1.27
SPARCL1-208ENST00000535835 MAGEB6P1A0A0J9YX57 407 aa7.13□□□□□ -1.27
SPARCL1-208ENST00000535835 SKIV2LQ15477 1246 aaKnown RBP7.13□□□□□ -1.27
SPARCL1-208ENST00000535835 PPP2R2DQ66LE6 453 aa7.13□□□□□ -1.27
SPARCL1-208ENST00000535835 VASH1Q7L8A9 365 aaPredicted RBP7.13□□□□□ -1.27
SPARCL1-208ENST00000535835 FAM117AQ9C073 453 aa7.13□□□□□ -1.27
SPARCL1-208ENST00000535835 KDM4CQ9H3R0 1056 aa7.13□□□□□ -1.27
SPARCL1-208ENST00000535835 DNMT3LQ9UJW3 386 aa7.13□□□□□ -1.27
SPARCL1-208ENST00000535835 SH3D19Q5HYK7 790 aa7.12□□□□□ -1.27
SPARCL1-208ENST00000535835 PDXDC2PQ6P474 469 aa7.12□□□□□ -1.27
SPARCL1-208ENST00000535835 CARD14Q9BXL6 1004 aa7.12□□□□□ -1.27
SPARCL1-208ENST00000535835 BMP2P12643 396 aa7.11□□□□□ -1.27
SPARCL1-208ENST00000535835 IRS1P35568 1242 aa7.11□□□□□ -1.27
SPARCL1-208ENST00000535835 NR6A1Q15406 480 aa7.11□□□□□ -1.27
SPARCL1-208ENST00000535835 CCDC116Q8IYX3 515 aa7.11□□□□□ -1.27
SPARCL1-208ENST00000535835 CNTNAP3BQ96NU0 1288 aa7.11□□□□□ -1.27
SPARCL1-208ENST00000535835 CNTNAP3Q9BZ76 1288 aa7.11□□□□□ -1.27
SPARCL1-208ENST00000535835 FKBPLQ9UIM3 349 aa7.11□□□□□ -1.27
SPARCL1-208ENST00000535835 PPP1R26Q5T8A7 1209 aaPredicted RBP7.1□□□□□ -1.27
SPARCL1-208ENST00000535835 KANK3Q6NY19 840 aa7.1□□□□□ -1.27
SPARCL1-208ENST00000535835 Q6ZVU0 165 aa7.1□□□□□ -1.27
SPARCL1-208ENST00000535835 EPS8L1Q8TE68 723 aa7.1□□□□□ -1.27
SPARCL1-208ENST00000535835 EMILIN1Q9Y6C2 1016 aa7.1□□□□□ -1.27
SPARCL1-208ENST00000535835 CBLBQ13191 982 aa7.09□□□□□ -1.27
SPARCL1-208ENST00000535835 SVOPQ8N4V2 548 aa7.09□□□□□ -1.27
SPARCL1-208ENST00000535835 MARSP56192 900 aaKnown RBP7.08□□□□□ -1.28
SPARCL1-208ENST00000535835 ARHGAP9Q9BRR9 750 aa7.08□□□□□ -1.28
SPARCL1-208ENST00000535835 TSEN34Q9BSV6 310 aaKnown RBP7.08□□□□□ -1.28
SPARCL1-208ENST00000535835 HMX1Q9NP08 348 aaPredicted RBP7.08□□□□□ -1.28
SPARCL1-208ENST00000535835 ZC3H4Q9UPT8 1303 aaKnown RBP7.07□□□□□ -1.28
SPARCL1-208ENST00000535835 KRT76Q01546 638 aa7.07□□□□□ -1.28
SPARCL1-208ENST00000535835 KCTD15Q96SI1 283 aaPredicted RBP7.07□□□□□ -1.28
SPARCL1-208ENST00000535835 SPINT1O43278 529 aa7.06□□□□□ -1.28
SPARCL1-208ENST00000535835 UPP2O95045 317 aa7.06□□□□□ -1.28
SPARCL1-208ENST00000535835 INTS6LQ5JSJ4 861 aaKnown RBP7.06□□□□□ -1.28
SPARCL1-208ENST00000535835 ZNF385CQ66K41 422 aaPredicted RBP7.06□□□□□ -1.28
SPARCL1-208ENST00000535835 GPR161Q8N6U8 529 aaKnown RBP7.06□□□□□ -1.28
SPARCL1-208ENST00000535835 DDRGK1Q96HY6 314 aa7.06□□□□□ -1.28
SPARCL1-208ENST00000535835 TTLL8A6PVC2 850 aa7.05□□□□□ -1.28
SPARCL1-208ENST00000535835 SCARF2Q96GP6 870 aaPredicted RBP7.05□□□□□ -1.28
SPARCL1-208ENST00000535835 AP1G2O75843 785 aa7.04□□□□□ -1.28
SPARCL1-208ENST00000535835 PTSQ03393 145 aa7.04□□□□□ -1.28
SPARCL1-208ENST00000535835 ADAM32Q8TC27 787 aa7.04□□□□□ -1.28
SPARCL1-208ENST00000535835 SLC10A4Q96EP9 437 aa7.04□□□□□ -1.28
SPARCL1-208ENST00000535835 AGBL1Q96MI9 1066 aa7.04□□□□□ -1.28
SPARCL1-208ENST00000535835 COL25A1Q9BXS0 654 aaPredicted RBP7.04□□□□□ -1.28
SPARCL1-208ENST00000535835 KRTAP4-8Q9BYQ9 185 aa7.04□□□□□ -1.28
SPARCL1-208ENST00000535835 GPSM3Q9Y4H4 160 aa7.04□□□□□ -1.28
SPARCL1-208ENST00000535835 FIGNL2A6NMB9 653 aa7.03□□□□□ -1.28
SPARCL1-208ENST00000535835 ADAM23O75077 832 aa7.03□□□□□ -1.28
SPARCL1-208ENST00000535835 USP17L8P0C7I0 530 aa7.03□□□□□ -1.28
SPARCL1-208ENST00000535835 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.03□□□□□ -1.28
SPARCL1-208ENST00000535835 ZBTB33Q86T24 672 aa7.03□□□□□ -1.28
SPARCL1-208ENST00000535835 KDF1Q8NAX2 398 aaPredicted RBP7.03□□□□□ -1.28
SPARCL1-208ENST00000535835 PGPEP1Q9NXJ5 209 aa7.03□□□□□ -1.28
SPARCL1-208ENST00000535835 CDV3Q9UKY7 258 aaKnown RBP7.03□□□□□ -1.28
SPARCL1-208ENST00000535835 CTSOP43234 321 aaPredicted RBP7.02□□□□□ -1.29
SPARCL1-208ENST00000535835 PTK2Q05397 1052 aa7.02□□□□□ -1.29
SPARCL1-208ENST00000535835 TRIM34Q9BYJ4 488 aa7.02□□□□□ -1.29
SPARCL1-208ENST00000535835 TMPRSS4Q9NRS4 437 aa7.02□□□□□ -1.29
SPARCL1-208ENST00000535835 SLC35F4A4IF30 521 aa7.01□□□□□ -1.29
SPARCL1-208ENST00000535835 MSTNO14793 375 aa7.01□□□□□ -1.29
SPARCL1-208ENST00000535835 LILRA1O75019 489 aa7.01□□□□□ -1.29
SPARCL1-208ENST00000535835 ARHGEF15O94989 841 aa7.01□□□□□ -1.29
SPARCL1-208ENST00000535835 RFC5P40937 340 aa7.01□□□□□ -1.29
SPARCL1-208ENST00000535835 NANOS1Q8WY41 292 aaKnown RBP7.01□□□□□ -1.29
SPARCL1-208ENST00000535835 ESPNB1AK53 854 aa7□□□□□ -1.29
SPARCL1-208ENST00000535835 ADD1P35611 737 aaKnown RBP7□□□□□ -1.29
SPARCL1-208ENST00000535835 DHX9Q08211 1270 aaKnown RBP7□□□□□ -1.29
SPARCL1-208ENST00000535835 CCDC155Q8N6L0 562 aa7□□□□□ -1.29
SPARCL1-208ENST00000535835 SENP3-EIF4A1A0A087X0R7 540 aa6.99□□□□□ -1.29
SPARCL1-208ENST00000535835 SLURP2P0DP57 97 aa6.99□□□□□ -1.29
SPARCL1-208ENST00000535835 ZNF784Q8NCA9 323 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-208ENST00000535835 WHAMMQ8TF30 809 aa6.99□□□□□ -1.29
SPARCL1-208ENST00000535835 INSM2Q96T92 566 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-208ENST00000535835 ERVH48-1M5A8F1 160 aa6.98□□□□□ -1.29
SPARCL1-208ENST00000535835 RELBQ01201 579 aa6.98□□□□□ -1.29
SPARCL1-208ENST00000535835 RNFT1Q5M7Z0 435 aa6.98□□□□□ -1.29
SPARCL1-208ENST00000535835 FOXD4L5Q5VV16 416 aaPredicted RBP6.98□□□□□ -1.29
SPARCL1-208ENST00000535835 RNF217Q8TC41 542 aa6.98□□□□□ -1.29
SPARCL1-208ENST00000535835 ZNF395Q9H8N7 513 aaPredicted RBP6.98□□□□□ -1.29
SPARCL1-208ENST00000535835 GJD4Q96KN9 370 aaPredicted RBP6.97□□□□□ -1.29
SPARCL1-208ENST00000535835 PSMG3-AS1Q96PY0 264 aa6.97□□□□□ -1.29
SPARCL1-208ENST00000535835 GOPCQ9HD26 462 aa6.97□□□□□ -1.29
SPARCL1-208ENST00000535835 ADH1AP07327 375 aa6.96□□□□□ -1.3
SPARCL1-208ENST00000535835 NBPF20Q3BBV1 942 aa6.96□□□□□ -1.3
SPARCL1-208ENST00000535835 ITGA6P23229 1130 aa6.95□□□□□ -1.3
SPARCL1-208ENST00000535835 RAB15P59190 212 aa6.95□□□□□ -1.3
SPARCL1-208ENST00000535835 PLA2G4EQ3MJ16 856 aa6.95□□□□□ -1.3
SPARCL1-208ENST00000535835 BCANQ96GW7 911 aa6.95□□□□□ -1.3
SPARCL1-208ENST00000535835 SPOCK3Q9BQ16 436 aa6.95□□□□□ -1.3
SPARCL1-208ENST00000535835 GPR37L1O60883 481 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms