RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 FAM98CQ17RN3 349 aaKnown RBP30.67■■■□□ 2.5
VPS37C-202ENST00000535818 LTN1O94822 1766 aa30.66■■■□□ 2.5
VPS37C-202ENST00000535818 LARP1Q6PKG0 1096 aaKnown RBP30.65■■■□□ 2.5
VPS37C-202ENST00000535818 SEPT12Q8IYM1 358 aa30.65■■■□□ 2.5
VPS37C-202ENST00000535818 USP35Q9P2H5 1018 aa30.65■■■□□ 2.5
VPS37C-202ENST00000535818 SPATA31A1Q5TZJ5 1347 aa30.65■■■□□ 2.5
VPS37C-202ENST00000535818 ABCC6O95255 1503 aa30.64■■■□□ 2.5
VPS37C-202ENST00000535818 KIF7Q2M1P5 1343 aa30.64■■■□□ 2.5
VPS37C-202ENST00000535818 AXIN2Q9Y2T1 843 aa30.63■■■□□ 2.49
VPS37C-202ENST00000535818 CGNL1Q0VF96 1302 aa30.62■■■□□ 2.49
VPS37C-202ENST00000535818 RGPD5Q99666 1765 aa30.61■■■□□ 2.49
VPS37C-202ENST00000535818 ONECUT3O60422 494 aaPredicted RBP30.61■■■□□ 2.49
VPS37C-202ENST00000535818 PANK3Q9H999 370 aa30.61■■■□□ 2.49
VPS37C-202ENST00000535818 CSB-PGBD3P0DP91 1061 aa30.6■■■□□ 2.49
VPS37C-202ENST00000535818 CRB1P82279 1406 aa30.6■■■□□ 2.49
VPS37C-202ENST00000535818 TOM1L2Q6ZVM7 507 aa30.59■■■□□ 2.49
VPS37C-202ENST00000535818 WDR17Q8IZU2 1322 aa30.58■■■□□ 2.49
VPS37C-202ENST00000535818 BRWD3Q6RI45 1802 aa30.58■■■□□ 2.49
VPS37C-202ENST00000535818 TCP11L2Q8N4U5 519 aa30.57■■■□□ 2.48
VPS37C-202ENST00000535818 THSD7AQ9UPZ6 1657 aa30.55■■■□□ 2.48
VPS37C-202ENST00000535818 FBLN1P23142 703 aa30.54■■■□□ 2.48
VPS37C-202ENST00000535818 THRAP3Q9Y2W1 955 aaKnown RBP30.54■■■□□ 2.48
VPS37C-202ENST00000535818 MAP3K19Q56UN5 1328 aa30.53■■■□□ 2.48
VPS37C-202ENST00000535818 AMPHP49418 695 aa30.53■■■□□ 2.48
VPS37C-202ENST00000535818 BARGINQ6ZT62 677 aa30.53■■■□□ 2.48
VPS37C-202ENST00000535818 KRT27Q7Z3Y8 459 aa30.53■■■□□ 2.48
VPS37C-202ENST00000535818 CCDC7Q96M83 1385 aa30.53■■■□□ 2.48
VPS37C-202ENST00000535818 UPF1Q92900 1129 aaKnown RBP eCLIP30.52■■■□□ 2.48
VPS37C-202ENST00000535818 BLMP54132 1417 aaPredicted RBP30.52■■■□□ 2.48
VPS37C-202ENST00000535818 RRS1Q15050 365 aaKnown RBP30.51■■■□□ 2.47
VPS37C-202ENST00000535818 IP6K1Q92551 441 aa30.51■■■□□ 2.47
VPS37C-202ENST00000535818 ERBB3P21860 1342 aa30.5■■■□□ 2.47
VPS37C-202ENST00000535818 ANKRD24Q8TF21 1146 aa30.49■■■□□ 2.47
VPS37C-202ENST00000535818 KNSTRNQ9Y448 316 aa30.49■■■□□ 2.47
VPS37C-202ENST00000535818 ANKRD26Q9UPS8 1709 aa30.49■■■□□ 2.47
VPS37C-202ENST00000535818 WASHC2AQ641Q2 1341 aa30.48■■■□□ 2.47
VPS37C-202ENST00000535818 RTL1A6NKG5 1358 aa30.48■■■□□ 2.47
VPS37C-202ENST00000535818 HOXC9P31274 260 aa30.47■■■□□ 2.47
VPS37C-202ENST00000535818 CARD10Q9BWT7 1032 aa30.47■■■□□ 2.47
VPS37C-202ENST00000535818 NSD2O96028 1365 aa30.46■■■□□ 2.47
VPS37C-202ENST00000535818 ZEB1P37275 1124 aaPredicted RBP30.46■■■□□ 2.47
VPS37C-202ENST00000535818 LTV1Q96GA3 475 aaPredicted RBP30.45■■■□□ 2.47
VPS37C-202ENST00000535818 NLRP2Q9NX02 1062 aa30.45■■■□□ 2.47
VPS37C-202ENST00000535818 WNK3Q9BYP7 1800 aa30.43■■■□□ 2.46
VPS37C-202ENST00000535818 FAM208AQ9UK61 1670 aaKnown RBP30.42■■■□□ 2.46
VPS37C-202ENST00000535818 PARP4Q9UKK3 1724 aaKnown RBP30.42■■■□□ 2.46
VPS37C-202ENST00000535818 PDE3BQ13370 1112 aa30.41■■■□□ 2.46
VPS37C-202ENST00000535818 FLT4P35916 1363 aa30.41■■■□□ 2.46
VPS37C-202ENST00000535818 TNNT2P45379 298 aaPredicted RBP30.4■■■□□ 2.46
VPS37C-202ENST00000535818 CDCA7Q9BWT1 371 aaPredicted RBP30.39■■■□□ 2.46
VPS37C-202ENST00000535818 EMILIN1Q9Y6C2 1016 aa30.39■■■□□ 2.46
VPS37C-202ENST00000535818 KIF24Q5T7B8 1368 aa30.39■■■□□ 2.45
VPS37C-202ENST00000535818 PEAK1Q9H792 1746 aa30.39■■■□□ 2.45
VPS37C-202ENST00000535818 SMG6Q86US8 1419 aaKnown RBP30.39■■■□□ 2.45
VPS37C-202ENST00000535818 PPM1GO15355 546 aaPredicted RBP30.37■■■□□ 2.45
VPS37C-202ENST00000535818 FAM182BQ5T319 152 aa30.37■■■□□ 2.45
VPS37C-202ENST00000535818 MORC1Q86VD1 984 aa30.37■■■□□ 2.45
VPS37C-202ENST00000535818 LRRC37A3O60309 1634 aa30.36■■■□□ 2.45
VPS37C-202ENST00000535818 DDB1Q16531 1140 aa30.36■■■□□ 2.45
VPS37C-202ENST00000535818 INSRP06213 1382 aa30.35■■■□□ 2.45
VPS37C-202ENST00000535818 MAP2P11137 1827 aaKnown RBP30.35■■■□□ 2.45
VPS37C-202ENST00000535818 DISP2A7MBM2 1401 aa30.34■■■□□ 2.45
VPS37C-202ENST00000535818 CCDC125Q86Z20 511 aa30.34■■■□□ 2.45
VPS37C-202ENST00000535818 HSP90AB2PQ58FF8 381 aa30.33■■■□□ 2.45
VPS37C-202ENST00000535818 AMER1Q5JTC6 1135 aaPredicted RBP30.33■■■□□ 2.45
VPS37C-202ENST00000535818 SF3B2Q13435 895 aaKnown RBP30.31■■■□□ 2.44
VPS37C-202ENST00000535818 POLKQ9UBT6 870 aa30.31■■■□□ 2.44
VPS37C-202ENST00000535818 PER1O15534 1290 aaPredicted RBP30.3■■■□□ 2.44
VPS37C-202ENST00000535818 IL2RBP14784 551 aa30.3■■■□□ 2.44
VPS37C-202ENST00000535818 FAM196AQ6ZSG2 479 aa30.3■■■□□ 2.44
VPS37C-202ENST00000535818 RGPD2P0DJD1 1756 aa30.29■■■□□ 2.44
VPS37C-202ENST00000535818 EXOC5O00471 708 aa30.28■■■□□ 2.44
VPS37C-202ENST00000535818 CC2D1BQ5T0F9 858 aaKnown RBP30.27■■■□□ 2.44
VPS37C-202ENST00000535818 EP400Q96L91 3159 aa30.27■■■□□ 2.44
VPS37C-202ENST00000535818 TNS2Q63HR2 1409 aa30.26■■■□□ 2.43
VPS37C-202ENST00000535818 OVOS2A0A0G2JMS6 1433 aa30.25■■■□□ 2.43
VPS37C-202ENST00000535818 CNGB1Q14028 1251 aaPredicted RBP30.24■■■□□ 2.43
VPS37C-202ENST00000535818 NBPF6Q5VWK0 638 aa30.24■■■□□ 2.43
VPS37C-202ENST00000535818 NBPF4Q96M43 638 aa30.24■■■□□ 2.43
VPS37C-202ENST00000535818 RGPD1P0DJD0 1748 aa30.24■■■□□ 2.43
VPS37C-202ENST00000535818 USHBP1Q8N6Y0 703 aa30.23■■■□□ 2.43
VPS37C-202ENST00000535818 NPC1L1Q9UHC9 1359 aa30.2■■■□□ 2.43
VPS37C-202ENST00000535818 TRIM37O94972 964 aa30.2■■■□□ 2.43
VPS37C-202ENST00000535818 MARCH10Q8NA82 808 aaPredicted RBP30.19■■■□□ 2.42
VPS37C-202ENST00000535818 BAG6P46379 1132 aa30.17■■■□□ 2.42
VPS37C-202ENST00000535818 RAPGEF4Q8WZA2 1011 aa30.17■■■□□ 2.42
VPS37C-202ENST00000535818 MEGF6O75095 1541 aa30.17■■■□□ 2.42
VPS37C-202ENST00000535818 DEFB132Q7Z7B7 95 aa30.16■■■□□ 2.42
VPS37C-202ENST00000535818 TNS1Q9HBL0 1735 aaKnown RBP30.16■■■□□ 2.42
VPS37C-202ENST00000535818 EIF4A2Q14240 407 aaKnown RBP30.15■■■□□ 2.42
VPS37C-202ENST00000535818 TATP17735 454 aaPredicted RBP30.13■■■□□ 2.41
VPS37C-202ENST00000535818 EYA1Q99502 592 aa30.12■■■□□ 2.41
VPS37C-202ENST00000535818 DDX54Q8TDD1 881 aaKnown RBP30.11■■■□□ 2.41
VPS37C-202ENST00000535818 ZCRB1Q8TBF4 217 aaKnown RBP30.1■■■□□ 2.41
VPS37C-202ENST00000535818 BCL9O00512 1426 aa30.1■■■□□ 2.41
VPS37C-202ENST00000535818 SBF2Q86WG5 1849 aa30.1■■■□□ 2.41
VPS37C-202ENST00000535818 APBA3O96018 575 aa30.09■■■□□ 2.41
VPS37C-202ENST00000535818 MTHFSP49914 203 aa30.09■■■□□ 2.41
VPS37C-202ENST00000535818 NCAPD2Q15021 1401 aa30.09■■■□□ 2.41
VPS37C-202ENST00000535818 EN1Q05925 392 aaPredicted RBP30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms