RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 NSD3Q9BZ95 1437 aa17.84■□□□□ 0.45
CCS-209ENST00000534763 CGNL1Q0VF96 1302 aa17.84■□□□□ 0.45
CCS-209ENST00000534763 LARP1Q6PKG0 1096 aaKnown RBP17.84■□□□□ 0.45
CCS-209ENST00000534763 WDR17Q8IZU2 1322 aa17.83■□□□□ 0.44
CCS-209ENST00000534763 SOX12O15370 315 aa17.83■□□□□ 0.44
CCS-209ENST00000534763 FAM98CQ17RN3 349 aaKnown RBP17.83■□□□□ 0.44
CCS-209ENST00000534763 KIF7Q2M1P5 1343 aa17.82■□□□□ 0.44
CCS-209ENST00000534763 ZBTB7CA1YPR0 619 aa17.82■□□□□ 0.44
CCS-209ENST00000534763 TCP11L2Q8N4U5 519 aa17.82■□□□□ 0.44
CCS-209ENST00000534763 POLR3GLQ9BT43 218 aa17.82■□□□□ 0.44
CCS-209ENST00000534763 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
CCS-209ENST00000534763 GGNBP2Q9H3C7 697 aa17.81■□□□□ 0.44
CCS-209ENST00000534763 PANK3Q9H999 370 aa17.81■□□□□ 0.44
CCS-209ENST00000534763 THSD7AQ9UPZ6 1657 aa17.8■□□□□ 0.44
CCS-209ENST00000534763 IP6K1Q92551 441 aa17.8■□□□□ 0.44
CCS-209ENST00000534763 UPF1Q92900 1129 aaKnown RBP eCLIP17.8■□□□□ 0.44
CCS-209ENST00000534763 KIF24Q5T7B8 1368 aa17.79■□□□□ 0.44
CCS-209ENST00000534763 KRT27Q7Z3Y8 459 aa17.79■□□□□ 0.44
CCS-209ENST00000534763 CARD10Q9BWT7 1032 aa17.79■□□□□ 0.44
CCS-209ENST00000534763 RTL1A6NKG5 1358 aa17.79■□□□□ 0.44
CCS-209ENST00000534763 NSD2O96028 1365 aa17.79■□□□□ 0.44
CCS-209ENST00000534763 ERBB3P21860 1342 aa17.78■□□□□ 0.44
CCS-209ENST00000534763 KIF20BQ96Q89 1820 aa17.78■□□□□ 0.44
CCS-209ENST00000534763 TOM1L2Q6ZVM7 507 aa17.78■□□□□ 0.44
CCS-209ENST00000534763 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.44
CCS-209ENST00000534763 CCDC125Q86Z20 511 aa17.77■□□□□ 0.44
CCS-209ENST00000534763 CDCA7Q9BWT1 371 aaPredicted RBP17.77■□□□□ 0.44
CCS-209ENST00000534763 CCDC7Q96M83 1385 aa17.77■□□□□ 0.43
CCS-209ENST00000534763 LTN1O94822 1766 aa17.76■□□□□ 0.43
CCS-209ENST00000534763 USP35Q9P2H5 1018 aa17.76■□□□□ 0.43
CCS-209ENST00000534763 A0A0G2JS52 829 aa17.75■□□□□ 0.43
CCS-209ENST00000534763 CSB-PGBD3P0DP91 1061 aa17.75■□□□□ 0.43
CCS-209ENST00000534763 MYT1Q01538 1121 aa17.75■□□□□ 0.43
CCS-209ENST00000534763 HOXC9P31274 260 aa17.74■□□□□ 0.43
CCS-209ENST00000534763 AMPHP49418 695 aa17.74■□□□□ 0.43
CCS-209ENST00000534763 ANKRD24Q8TF21 1146 aa17.74■□□□□ 0.43
CCS-209ENST00000534763 WASHC2AQ641Q2 1341 aa17.73■□□□□ 0.43
CCS-209ENST00000534763 KNSTRNQ9Y448 316 aa17.73■□□□□ 0.43
CCS-209ENST00000534763 BRWD3Q6RI45 1802 aa17.72■□□□□ 0.43
CCS-209ENST00000534763 RGPD5Q99666 1765 aa17.71■□□□□ 0.43
CCS-209ENST00000534763 INSRP06213 1382 aa17.71■□□□□ 0.43
CCS-209ENST00000534763 FLT4P35916 1363 aa17.71■□□□□ 0.43
CCS-209ENST00000534763 PER1O15534 1290 aaPredicted RBP17.71■□□□□ 0.43
CCS-209ENST00000534763 FBLN1P23142 703 aa17.71■□□□□ 0.43
CCS-209ENST00000534763 RRS1Q15050 365 aaKnown RBP17.71■□□□□ 0.43
CCS-209ENST00000534763 DISP2A7MBM2 1401 aa17.71■□□□□ 0.43
CCS-209ENST00000534763 PARP4Q9UKK3 1724 aaKnown RBP17.7■□□□□ 0.42
CCS-209ENST00000534763 EP400Q96L91 3159 aa17.7■□□□□ 0.42
CCS-209ENST00000534763 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
CCS-209ENST00000534763 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
CCS-209ENST00000534763 FAM208AQ9UK61 1670 aaKnown RBP17.69■□□□□ 0.42
CCS-209ENST00000534763 ZEB1P37275 1124 aaPredicted RBP17.69■□□□□ 0.42
CCS-209ENST00000534763 AMER1Q5JTC6 1135 aaPredicted RBP17.69■□□□□ 0.42
CCS-209ENST00000534763 NLRP2Q9NX02 1062 aa17.69■□□□□ 0.42
CCS-209ENST00000534763 FAM196AQ6ZSG2 479 aa17.68■□□□□ 0.42
CCS-209ENST00000534763 SMG6Q86US8 1419 aaKnown RBP17.68■□□□□ 0.42
CCS-209ENST00000534763 NPC1L1Q9UHC9 1359 aa17.67■□□□□ 0.42
CCS-209ENST00000534763 DDB1Q16531 1140 aa17.67■□□□□ 0.42
CCS-209ENST00000534763 POLKQ9UBT6 870 aa17.66■□□□□ 0.42
CCS-209ENST00000534763 BCL9O00512 1426 aa17.65■□□□□ 0.42
CCS-209ENST00000534763 IL2RBP14784 551 aa17.65■□□□□ 0.42
CCS-209ENST00000534763 HSP90AB2PQ58FF8 381 aa17.65■□□□□ 0.42
CCS-209ENST00000534763 MORC1Q86VD1 984 aa17.65■□□□□ 0.42
CCS-209ENST00000534763 EMILIN1Q9Y6C2 1016 aa17.65■□□□□ 0.42
CCS-209ENST00000534763 WNK3Q9BYP7 1800 aa17.65■□□□□ 0.42
CCS-209ENST00000534763 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
CCS-209ENST00000534763 EXOC5O00471 708 aa17.64■□□□□ 0.41
CCS-209ENST00000534763 LTV1Q96GA3 475 aaPredicted RBP17.64■□□□□ 0.41
CCS-209ENST00000534763 LRRC37A3O60309 1634 aa17.64■□□□□ 0.41
CCS-209ENST00000534763 SF3B2Q13435 895 aaKnown RBP17.63■□□□□ 0.41
CCS-209ENST00000534763 OVOS2A0A0G2JMS6 1433 aa17.63■□□□□ 0.41
CCS-209ENST00000534763 TNS2Q63HR2 1409 aa17.63■□□□□ 0.41
CCS-209ENST00000534763 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
CCS-209ENST00000534763 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
CCS-209ENST00000534763 PPM1GO15355 546 aaPredicted RBP17.6■□□□□ 0.41
CCS-209ENST00000534763 TNNT2P45379 298 aaPredicted RBP17.6■□□□□ 0.41
CCS-209ENST00000534763 FAM182BQ5T319 152 aa17.6■□□□□ 0.41
CCS-209ENST00000534763 NCAPD2Q15021 1401 aa17.6■□□□□ 0.41
CCS-209ENST00000534763 MARCH10Q8NA82 808 aaPredicted RBP17.59■□□□□ 0.41
CCS-209ENST00000534763 MAP2P11137 1827 aaKnown RBP17.58■□□□□ 0.4
CCS-209ENST00000534763 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.4
CCS-209ENST00000534763 PLEKHG2Q9H7P9 1386 aa17.57■□□□□ 0.4
CCS-209ENST00000534763 BAG6P46379 1132 aa17.57■□□□□ 0.4
CCS-209ENST00000534763 TRIM37O94972 964 aa17.55■□□□□ 0.4
CCS-209ENST00000534763 EIF4A2Q14240 407 aaKnown RBP17.55■□□□□ 0.4
CCS-209ENST00000534763 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
CCS-209ENST00000534763 PARD3Q8TEW0 1356 aa17.54■□□□□ 0.4
CCS-209ENST00000534763 MEGF6O75095 1541 aa17.54■□□□□ 0.4
CCS-209ENST00000534763 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
CCS-209ENST00000534763 EYA1Q99502 592 aa17.54■□□□□ 0.4
CCS-209ENST00000534763 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
CCS-209ENST00000534763 TATP17735 454 aaPredicted RBP17.53■□□□□ 0.4
CCS-209ENST00000534763 ZCRB1Q8TBF4 217 aaKnown RBP17.53■□□□□ 0.4
CCS-209ENST00000534763 TNS1Q9HBL0 1735 aaKnown RBP17.52■□□□□ 0.4
CCS-209ENST00000534763 DEFB132Q7Z7B7 95 aa17.52■□□□□ 0.4
CCS-209ENST00000534763 IGSF1Q8N6C5 1336 aa17.51■□□□□ 0.39
CCS-209ENST00000534763 RGPD2P0DJD1 1756 aa17.51■□□□□ 0.39
CCS-209ENST00000534763 MTHFSP49914 203 aa17.51■□□□□ 0.39
CCS-209ENST00000534763 USHBP1Q8N6Y0 703 aa17.51■□□□□ 0.39
CCS-209ENST00000534763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms