RNA–Protein interactions for RNA: ENST00000534581.1

C11orf49-222, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 3

Gene C11orf49, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-222ENST00000534581 SLIT2O94813 1529 aa23.08■■□□□ 1.29
C11orf49-222ENST00000534581 QTRT2Q9H974 415 aaKnown RBP23.08■■□□□ 1.29
C11orf49-222ENST00000534581 TRPC5Q9UL62 973 aaPredicted RBP23.08■■□□□ 1.29
C11orf49-222ENST00000534581 COL14A1Q05707 1796 aaKnown RBP23.07■■□□□ 1.28
C11orf49-222ENST00000534581 RTL1A6NKG5 1358 aa23.06■■□□□ 1.28
C11orf49-222ENST00000534581 ANKRD24Q8TF21 1146 aa23.06■■□□□ 1.28
C11orf49-222ENST00000534581 RGS17Q9UGC6 210 aaPredicted RBP23.06■■□□□ 1.28
C11orf49-222ENST00000534581 BCL9LQ86UU0 1499 aa23.05■■□□□ 1.28
C11orf49-222ENST00000534581 FLT4P35916 1363 aa23.05■■□□□ 1.28
C11orf49-222ENST00000534581 RALBP1Q15311 655 aa23.05■■□□□ 1.28
C11orf49-222ENST00000534581 HSP90AB2PQ58FF8 381 aa23.05■■□□□ 1.28
C11orf49-222ENST00000534581 MTHFSP49914 203 aa23.04■■□□□ 1.28
C11orf49-222ENST00000534581 LARP1Q6PKG0 1096 aaKnown RBP23.04■■□□□ 1.28
C11orf49-222ENST00000534581 TOM1L2Q6ZVM7 507 aa23.04■■□□□ 1.28
C11orf49-222ENST00000534581 CAMTA1Q9Y6Y1 1673 aa23.03■■□□□ 1.28
C11orf49-222ENST00000534581 KIF24Q5T7B8 1368 aa23.03■■□□□ 1.28
C11orf49-222ENST00000534581 VPS72Q15906 364 aa23.03■■□□□ 1.28
C11orf49-222ENST00000534581 USP35Q9P2H5 1018 aa23.03■■□□□ 1.28
C11orf49-222ENST00000534581 ANKRD26Q9UPS8 1709 aa23.02■■□□□ 1.28
C11orf49-222ENST00000534581 BLMP54132 1417 aaPredicted RBP23.02■■□□□ 1.28
C11orf49-222ENST00000534581 PPP2R1AP30153 589 aa23.02■■□□□ 1.28
C11orf49-222ENST00000534581 NLRP2Q9NX02 1062 aa23.02■■□□□ 1.28
C11orf49-222ENST00000534581 COL5A2P05997 1499 aaPredicted RBP23.01■■□□□ 1.27
C11orf49-222ENST00000534581 ANP32CO43423 234 aa23.01■■□□□ 1.27
C11orf49-222ENST00000534581 POTEAQ6S8J7 498 aa23.01■■□□□ 1.27
C11orf49-222ENST00000534581 PARD3Q8TEW0 1356 aa23.01■■□□□ 1.27
C11orf49-222ENST00000534581 SMG6Q86US8 1419 aaKnown RBP23■■□□□ 1.27
C11orf49-222ENST00000534581 ERBB3P21860 1342 aa23■■□□□ 1.27
C11orf49-222ENST00000534581 WDR17Q8IZU2 1322 aa23■■□□□ 1.27
C11orf49-222ENST00000534581 INSRP06213 1382 aa23■■□□□ 1.27
C11orf49-222ENST00000534581 ABCC6O95255 1503 aa22.99■■□□□ 1.27
C11orf49-222ENST00000534581 RXRBP28702 533 aa22.99■■□□□ 1.27
C11orf49-222ENST00000534581 GJD4Q96KN9 370 aaPredicted RBP22.99■■□□□ 1.27
C11orf49-222ENST00000534581 PLCH1Q4KWH8 1693 aa22.99■■□□□ 1.27
C11orf49-222ENST00000534581 ATRNO75882 1429 aa22.99■■□□□ 1.27
C11orf49-222ENST00000534581 CFAP53Q96M91 514 aa22.98■■□□□ 1.27
C11orf49-222ENST00000534581 PRKRIP1Q9H875 184 aaPredicted RBP22.98■■□□□ 1.27
C11orf49-222ENST00000534581 LMO7Q8WWI1 1683 aa22.97■■□□□ 1.27
C11orf49-222ENST00000534581 RBM6P78332 1123 aaKnown RBP22.97■■□□□ 1.27
C11orf49-222ENST00000534581 SPATA31A5Q5VU36 1347 aa22.97■■□□□ 1.27
C11orf49-222ENST00000534581 SPATA31A7Q8IWB4 1347 aa22.97■■□□□ 1.27
C11orf49-222ENST00000534581 A0A0G2JS52 829 aa22.96■■□□□ 1.27
C11orf49-222ENST00000534581 MYT1Q01538 1121 aa22.96■■□□□ 1.27
C11orf49-222ENST00000534581 LTN1O94822 1766 aa22.96■■□□□ 1.27
C11orf49-222ENST00000534581 CRB1P82279 1406 aa22.95■■□□□ 1.26
C11orf49-222ENST00000534581 EIF4A2Q14240 407 aaKnown RBP22.95■■□□□ 1.26
C11orf49-222ENST00000534581 SPATA31A1Q5TZJ5 1347 aa22.95■■□□□ 1.26
C11orf49-222ENST00000534581 MYBBP1AQ9BQG0 1328 aaKnown RBP22.95■■□□□ 1.26
C11orf49-222ENST00000534581 NWD2Q9ULI1 1742 aa22.95■■□□□ 1.26
C11orf49-222ENST00000534581 COL18A1P39060 1754 aa22.94■■□□□ 1.26
C11orf49-222ENST00000534581 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
C11orf49-222ENST00000534581 CARD10Q9BWT7 1032 aa22.94■■□□□ 1.26
C11orf49-222ENST00000534581 CDK12Q9NYV4 1490 aaPredicted RBP22.93■■□□□ 1.26
C11orf49-222ENST00000534581 FAM98CQ17RN3 349 aaKnown RBP22.93■■□□□ 1.26
C11orf49-222ENST00000534581 PEAK1Q9H792 1746 aa22.92■■□□□ 1.26
C11orf49-222ENST00000534581 DIAPH1O60610 1272 aaKnown RBP22.92■■□□□ 1.26
C11orf49-222ENST00000534581 NBPF6Q5VWK0 638 aa22.91■■□□□ 1.26
C11orf49-222ENST00000534581 USHBP1Q8N6Y0 703 aa22.91■■□□□ 1.26
C11orf49-222ENST00000534581 NBPF4Q96M43 638 aa22.91■■□□□ 1.26
C11orf49-222ENST00000534581 THRAP3Q9Y2W1 955 aaKnown RBP22.91■■□□□ 1.26
C11orf49-222ENST00000534581 NRAPQ86VF7 1730 aa22.91■■□□□ 1.26
C11orf49-222ENST00000534581 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
C11orf49-222ENST00000534581 MAP2P11137 1827 aaKnown RBP22.88■■□□□ 1.25
C11orf49-222ENST00000534581 U2SURPO15042 1029 aaKnown RBP22.88■■□□□ 1.25
C11orf49-222ENST00000534581 IL13P35225 146 aa22.88■■□□□ 1.25
C11orf49-222ENST00000534581 EYA1Q99502 592 aa22.88■■□□□ 1.25
C11orf49-222ENST00000534581 NUDCQ9Y266 331 aa22.88■■□□□ 1.25
C11orf49-222ENST00000534581 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.88■■□□□ 1.25
C11orf49-222ENST00000534581 BARGINQ6ZT62 677 aa22.87■■□□□ 1.25
C11orf49-222ENST00000534581 SEPT12Q8IYM1 358 aa22.85■■□□□ 1.25
C11orf49-222ENST00000534581 IL2RBP14784 551 aa22.84■■□□□ 1.25
C11orf49-222ENST00000534581 RAPGEF4Q8WZA2 1011 aa22.84■■□□□ 1.25
C11orf49-222ENST00000534581 CDCA7Q9BWT1 371 aaPredicted RBP22.84■■□□□ 1.25
C11orf49-222ENST00000534581 RGPD5Q99666 1765 aa22.84■■□□□ 1.25
C11orf49-222ENST00000534581 GLI3P10071 1580 aa22.82■■□□□ 1.24
C11orf49-222ENST00000534581 SULT6B1Q6IMI4 303 aa22.82■■□□□ 1.24
C11orf49-222ENST00000534581 IGSF1Q8N6C5 1336 aa22.82■■□□□ 1.24
C11orf49-222ENST00000534581 ONECUT3O60422 494 aaPredicted RBP22.81■■□□□ 1.24
C11orf49-222ENST00000534581 TATP17735 454 aaPredicted RBP22.81■■□□□ 1.24
C11orf49-222ENST00000534581 HMOX1P09601 288 aa22.8■■□□□ 1.24
C11orf49-222ENST00000534581 U2AF1L5P0DN76 240 aaPredicted RBP22.8■■□□□ 1.24
C11orf49-222ENST00000534581 U2AF1Q01081 240 aaKnown RBP eCLIP22.8■■□□□ 1.24
C11orf49-222ENST00000534581 EXOC5O00471 708 aa22.79■■□□□ 1.24
C11orf49-222ENST00000534581 PDE3BQ13370 1112 aa22.79■■□□□ 1.24
C11orf49-222ENST00000534581 DDB1Q16531 1140 aa22.79■■□□□ 1.24
C11orf49-222ENST00000534581 AEBP1Q8IUX7 1158 aa22.79■■□□□ 1.24
C11orf49-222ENST00000534581 COL3A1P02461 1466 aaPredicted RBP22.79■■□□□ 1.24
C11orf49-222ENST00000534581 RGS12O14924 1447 aa22.77■■□□□ 1.24
C11orf49-222ENST00000534581 WDR43Q15061 677 aaKnown RBP eCLIP22.76■■□□□ 1.23
C11orf49-222ENST00000534581 MRS2Q9HD23 443 aa22.76■■□□□ 1.23
C11orf49-222ENST00000534581 FAM208AQ9UK61 1670 aaKnown RBP22.75■■□□□ 1.23
C11orf49-222ENST00000534581 KRT27Q7Z3Y8 459 aa22.75■■□□□ 1.23
C11orf49-222ENST00000534581 DISP2A7MBM2 1401 aa22.74■■□□□ 1.23
C11orf49-222ENST00000534581 ZCRB1Q8TBF4 217 aaKnown RBP22.74■■□□□ 1.23
C11orf49-222ENST00000534581 MEGF6O75095 1541 aa22.72■■□□□ 1.23
C11orf49-222ENST00000534581 DDX54Q8TDD1 881 aaKnown RBP22.72■■□□□ 1.23
C11orf49-222ENST00000534581 SPG7Q9UQ90 795 aa22.72■■□□□ 1.23
C11orf49-222ENST00000534581 CCDC184Q52MB2 194 aa22.71■■□□□ 1.23
C11orf49-222ENST00000534581 PLEKHO1Q53GL0 409 aaPredicted RBP22.71■■□□□ 1.23
C11orf49-222ENST00000534581 ILDR2Q71H61 639 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms