RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 USP17L3A6NCW0 530 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 USP17L4A6NCW7 530 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 PIK3CDO00329 1044 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 SLFNL1Q499Z3 407 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 USP17L2Q6R6M4 530 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 USP17L1Q7RTZ2 530 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 NOVA2Q9UNW9 492 aaKnown RBP6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 PRXQ9BXM0 1461 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 PRDM2Q13029 1718 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 KIF27Q86VH2 1401 aa6.84□□□□□ -1.32
CYCSP28-201ENST00000534284 ZC3H4Q9UPT8 1303 aaKnown RBP6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L5A8MUK1 530 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 NR1I2O75469 434 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 KANK4Q5T7N3 995 aaPredicted RBP6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 LARP1Q6PKG0 1096 aaKnown RBP6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 SND1Q7KZF4 910 aaKnown RBP eCLIP6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 DEPDC4Q8N2C3 294 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 NFATC2IPQ8NCF5 419 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 ZNF592Q92610 1267 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 ZNF428Q96B54 188 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 PRKD2Q9BZL6 878 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 PCDHB3Q9Y5E6 796 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 CFTRP13569 1480 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 RAPGEF2Q9Y4G8 1499 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 JUNDP17535 347 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 PTK2Q05397 1052 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 ELOAQ14241 798 aaKnown RBP6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 PTPRNQ16849 979 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 TMEM164Q5U3C3 297 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 BRICD5Q6PL45 260 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 SCUBE3Q8IX30 993 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 PCDHB9Q9Y5E1 797 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 E9PSI1 815 aa6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 PPP1R18Q6NYC8 613 aa6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 RNF135Q8IUD6 432 aa6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 ARMC2Q8NEN0 867 aa6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 STK32AQ8WU08 396 aa6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 MKRN1Q9UHC7 482 aaKnown RBP6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 SALL2Q9Y467 1007 aaPredicted RBP6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 NRG2O14511 850 aaPredicted RBP6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 F12P00748 615 aaPredicted RBP6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 RASA1P20936 1047 aa6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 DIEXFQ68CQ4 756 aaKnown RBP6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 PLEKHM2Q8IWE5 1019 aa6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 ZNF516Q92618 1163 aa6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 MTRQ99707 1265 aa6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 ZMIZ1Q9ULJ6 1067 aa6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L15C9J2P7 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L10C9JJH3 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L13C9JLJ4 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L12C9JPN9 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L11C9JVI0 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L21D6R901 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L18D6R9N7 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L22D6RA61 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L17D6RBQ6 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L19D6RCP7 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L20D6RJB6 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 CCNYL3P0C7X3 344 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 APLP1P51693 650 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L24Q0WX57 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 NBPF14Q5TI25 921 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 FAM200AQ8TCP9 573 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 CEP126Q9P2H0 1117 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 MAP3K1Q13233 1512 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 FAM196BA6NMK8 535 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 MCCD1P59942 119 aaPredicted RBP6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 NCOA4Q13772 614 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 FAM174AQ8TBP5 190 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 NUDT12Q9BQG2 462 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 GNEQ9Y223 722 aaKnown RBP6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 CUX1P39880 1505 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 EML3Q32P44 896 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 CRTC2Q53ET0 693 aaPredicted RBP6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 PDXDC2PQ6P474 469 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 ZBTB33Q86T24 672 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 PLPP7Q8NBV4 271 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 GPKOWQ92917 476 aaPredicted RBP eCLIP6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 THAP11Q96EK4 314 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 GPSM3Q9Y4H4 160 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 V9GY48 417 aaPredicted RBP6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 KCNH2Q12809 1159 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 CCDC24Q8N4L8 307 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 NKX2-3Q8TAU0 364 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 SPSB2Q99619 263 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 ARHGAP9Q9BRR9 750 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 IL21Q9HBE4 155 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 EVA1BQ9NVM1 165 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 AMOTL2Q9Y2J4 779 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 RBM19Q9Y4C8 960 aaKnown RBP6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 CUX2O14529 1486 aa6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 LZTS3O60299 673 aaPredicted RBP6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 PTK7Q13308 1070 aa6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 ZNF787Q6DD87 383 aa6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 DZIP3Q86Y13 1208 aaKnown RBP6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 ZNF775Q96BV0 537 aaPredicted RBP6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 CDCA7Q9BWT1 371 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms