RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 PPARGC1BQ86YN6 1023 aaKnown RBP13.77□□□□□ -0.21
SOX9-AS1-213ENST00000533996 LMO7Q8WWI1 1683 aa13.77□□□□□ -0.21
SOX9-AS1-213ENST00000533996 HIRIP3Q9BW71 556 aaPredicted RBP13.77□□□□□ -0.21
SOX9-AS1-213ENST00000533996 PEAK1Q9H792 1746 aa13.76□□□□□ -0.21
SOX9-AS1-213ENST00000533996 OVOS2A0A0G2JMS6 1433 aa13.76□□□□□ -0.21
SOX9-AS1-213ENST00000533996 OVOS2A0A0J9YW53 1432 aa13.76□□□□□ -0.21
SOX9-AS1-213ENST00000533996 OVOS2Q6IE36 1432 aa13.76□□□□□ -0.21
SOX9-AS1-213ENST00000533996 CPDO75976 1380 aa13.76□□□□□ -0.21
SOX9-AS1-213ENST00000533996 MINK1Q8N4C8 1332 aaPredicted RBP13.76□□□□□ -0.21
SOX9-AS1-213ENST00000533996 LARP1Q6PKG0 1096 aaKnown RBP13.76□□□□□ -0.21
SOX9-AS1-213ENST00000533996 ADGRB1O14514 1584 aa13.75□□□□□ -0.21
SOX9-AS1-213ENST00000533996 TRAK1Q9UPV9 953 aa13.75□□□□□ -0.21
SOX9-AS1-213ENST00000533996 MYOM1P52179 1685 aa13.75□□□□□ -0.21
SOX9-AS1-213ENST00000533996 PTGER2P43116 358 aa13.74□□□□□ -0.21
SOX9-AS1-213ENST00000533996 SYT17Q9BSW7 474 aa13.74□□□□□ -0.21
SOX9-AS1-213ENST00000533996 BCL11BQ9C0K0 894 aaPredicted RBP13.74□□□□□ -0.21
SOX9-AS1-213ENST00000533996 NUDT16Q96DE0 195 aaKnown RBP13.73□□□□□ -0.21
SOX9-AS1-213ENST00000533996 UTRNP46939 3433 aa13.73□□□□□ -0.21
SOX9-AS1-213ENST00000533996 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
SOX9-AS1-213ENST00000533996 STAC3Q96MF2 364 aa13.72□□□□□ -0.21
SOX9-AS1-213ENST00000533996 ANO8Q9HCE9 1232 aaPredicted RBP13.72□□□□□ -0.21
SOX9-AS1-213ENST00000533996 CRB1P82279 1406 aa13.72□□□□□ -0.21
SOX9-AS1-213ENST00000533996 ZBTB7AO95365 584 aa13.71□□□□□ -0.21
SOX9-AS1-213ENST00000533996 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
SOX9-AS1-213ENST00000533996 ABTB2Q8N961 1025 aa13.71□□□□□ -0.21
SOX9-AS1-213ENST00000533996 BCL9O00512 1426 aa13.71□□□□□ -0.22
SOX9-AS1-213ENST00000533996 USP19O94966 1318 aa13.7□□□□□ -0.22
SOX9-AS1-213ENST00000533996 COL5A2P05997 1499 aaPredicted RBP13.7□□□□□ -0.22
SOX9-AS1-213ENST00000533996 DDB1Q16531 1140 aa13.7□□□□□ -0.22
SOX9-AS1-213ENST00000533996 NUTM2GQ5VZR2 741 aa13.7□□□□□ -0.22
SOX9-AS1-213ENST00000533996 FHDC1Q9C0D6 1143 aaPredicted RBP13.7□□□□□ -0.22
SOX9-AS1-213ENST00000533996 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
SOX9-AS1-213ENST00000533996 ACEP12821 1306 aa13.69□□□□□ -0.22
SOX9-AS1-213ENST00000533996 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
SOX9-AS1-213ENST00000533996 GCP02774 474 aa13.69□□□□□ -0.22
SOX9-AS1-213ENST00000533996 SLC15A2Q16348 729 aa13.69□□□□□ -0.22
SOX9-AS1-213ENST00000533996 NLRP13Q86W25 1043 aa13.69□□□□□ -0.22
SOX9-AS1-213ENST00000533996 PDGFDQ9GZP0 370 aaPredicted RBP13.69□□□□□ -0.22
SOX9-AS1-213ENST00000533996 STK32BQ9NY57 414 aa13.69□□□□□ -0.22
SOX9-AS1-213ENST00000533996 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
SOX9-AS1-213ENST00000533996 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
SOX9-AS1-213ENST00000533996 CDCA7Q9BWT1 371 aaPredicted RBP13.68□□□□□ -0.22
SOX9-AS1-213ENST00000533996 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
SOX9-AS1-213ENST00000533996 TOPAZ1Q8N9V7 1692 aa13.68□□□□□ -0.22
SOX9-AS1-213ENST00000533996 MAP3K5Q99683 1374 aa13.68□□□□□ -0.22
SOX9-AS1-213ENST00000533996 ARHGEF28Q8N1W1 1705 aaKnown RBP13.67□□□□□ -0.22
SOX9-AS1-213ENST00000533996 SGIP1Q9BQI5 828 aa13.67□□□□□ -0.22
SOX9-AS1-213ENST00000533996 BRD4O60885 1362 aaPredicted RBP13.67□□□□□ -0.22
SOX9-AS1-213ENST00000533996 AATKQ6ZMQ8 1374 aa13.67□□□□□ -0.22
SOX9-AS1-213ENST00000533996 AKT1S1Q96B36 256 aa13.66□□□□□ -0.22
SOX9-AS1-213ENST00000533996 CDK19Q9BWU1 502 aa13.66□□□□□ -0.22
SOX9-AS1-213ENST00000533996 WNK3Q9BYP7 1800 aa13.66□□□□□ -0.22
SOX9-AS1-213ENST00000533996 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
SOX9-AS1-213ENST00000533996 TXNRD1Q16881 649 aa13.65□□□□□ -0.22
SOX9-AS1-213ENST00000533996 ARXQ96QS3 562 aa13.64□□□□□ -0.23
SOX9-AS1-213ENST00000533996 TOM1L2Q6ZVM7 507 aa13.63□□□□□ -0.23
SOX9-AS1-213ENST00000533996 PTF1AQ7RTS3 328 aa13.63□□□□□ -0.23
SOX9-AS1-213ENST00000533996 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
SOX9-AS1-213ENST00000533996 MARCH10Q8NA82 808 aaPredicted RBP13.63□□□□□ -0.23
SOX9-AS1-213ENST00000533996 COL18A1P39060 1754 aa13.61□□□□□ -0.23
SOX9-AS1-213ENST00000533996 GPR162Q16538 588 aa13.61□□□□□ -0.23
SOX9-AS1-213ENST00000533996 DCAF11Q8TEB1 546 aa13.61□□□□□ -0.23
SOX9-AS1-213ENST00000533996 WDR17Q8IZU2 1322 aa13.61□□□□□ -0.23
SOX9-AS1-213ENST00000533996 EXOC5O00471 708 aa13.6□□□□□ -0.23
SOX9-AS1-213ENST00000533996 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
SOX9-AS1-213ENST00000533996 KDM2AQ9Y2K7 1162 aa13.6□□□□□ -0.23
SOX9-AS1-213ENST00000533996 SLIT3O75094 1523 aa13.59□□□□□ -0.23
SOX9-AS1-213ENST00000533996 MIER1Q8N108 512 aa13.59□□□□□ -0.23
SOX9-AS1-213ENST00000533996 SLC16A10Q8TF71 515 aa13.59□□□□□ -0.23
SOX9-AS1-213ENST00000533996 CARD10Q9BWT7 1032 aa13.58□□□□□ -0.24
SOX9-AS1-213ENST00000533996 CEP350Q5VT06 3117 aa13.57□□□□□ -0.24
SOX9-AS1-213ENST00000533996 NHSQ6T4R5 1651 aa13.57□□□□□ -0.24
SOX9-AS1-213ENST00000533996 COL24A1Q17RW2 1714 aa13.57□□□□□ -0.24
SOX9-AS1-213ENST00000533996 QSER1Q2KHR3 1735 aa13.57□□□□□ -0.24
SOX9-AS1-213ENST00000533996 NLRP6P59044 892 aa13.57□□□□□ -0.24
SOX9-AS1-213ENST00000533996 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
SOX9-AS1-213ENST00000533996 PAPPAQ13219 1627 aa13.57□□□□□ -0.24
SOX9-AS1-213ENST00000533996 SHANK3Q9BYB0 1731 aa13.56□□□□□ -0.24
SOX9-AS1-213ENST00000533996 PPIP5K1Q6PFW1 1433 aa13.56□□□□□ -0.24
SOX9-AS1-213ENST00000533996 RGPD5Q99666 1765 aa13.55□□□□□ -0.24
SOX9-AS1-213ENST00000533996 ZBTB7CA1YPR0 619 aa13.55□□□□□ -0.24
SOX9-AS1-213ENST00000533996 SPOCK2Q92563 424 aa13.55□□□□□ -0.24
SOX9-AS1-213ENST00000533996 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
SOX9-AS1-213ENST00000533996 KIAA1210Q9ULL0 1709 aa13.55□□□□□ -0.24
SOX9-AS1-213ENST00000533996 KCNH5Q8NCM2 988 aa13.54□□□□□ -0.24
SOX9-AS1-213ENST00000533996 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
SOX9-AS1-213ENST00000533996 USP6P35125 1406 aa13.54□□□□□ -0.24
SOX9-AS1-213ENST00000533996 GRIN3BO60391 1043 aa13.53□□□□□ -0.24
SOX9-AS1-213ENST00000533996 POLD1P28340 1107 aa13.53□□□□□ -0.24
SOX9-AS1-213ENST00000533996 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
SOX9-AS1-213ENST00000533996 ARHGEF25Q86VW2 580 aa13.53□□□□□ -0.24
SOX9-AS1-213ENST00000533996 CPSF1Q10570 1443 aaKnown RBP13.53□□□□□ -0.24
SOX9-AS1-213ENST00000533996 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
SOX9-AS1-213ENST00000533996 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
SOX9-AS1-213ENST00000533996 TNS2Q63HR2 1409 aa13.52□□□□□ -0.25
SOX9-AS1-213ENST00000533996 BTAF1O14981 1849 aa13.51□□□□□ -0.25
SOX9-AS1-213ENST00000533996 PIK3C2AO00443 1686 aa13.51□□□□□ -0.25
SOX9-AS1-213ENST00000533996 CSB-PGBD3P0DP91 1061 aa13.51□□□□□ -0.25
SOX9-AS1-213ENST00000533996 QRICH2Q9H0J4 1663 aa13.5□□□□□ -0.25
SOX9-AS1-213ENST00000533996 ABCC6O95255 1503 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms