RNA–Protein interactions for RNA: ENST00000533989.5

MS4A6A-220, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-220ENST00000533989 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
MS4A6A-220ENST00000533989 STRN4Q9NRL3 753 aa11.36□□□□□ -0.59
MS4A6A-220ENST00000533989 THRAP3Q9Y2W1 955 aaKnown RBP11.36□□□□□ -0.59
MS4A6A-220ENST00000533989 PARD3Q8TEW0 1356 aa11.36□□□□□ -0.59
MS4A6A-220ENST00000533989 LMO7Q8WWI1 1683 aa11.36□□□□□ -0.59
MS4A6A-220ENST00000533989 LRP5O75197 1615 aa11.35□□□□□ -0.59
MS4A6A-220ENST00000533989 EVA1CP58658 441 aa11.35□□□□□ -0.59
MS4A6A-220ENST00000533989 TCP11L2Q8N4U5 519 aa11.35□□□□□ -0.59
MS4A6A-220ENST00000533989 CABP1Q9NZU7 370 aa11.35□□□□□ -0.59
MS4A6A-220ENST00000533989 AATKQ6ZMQ8 1374 aa11.35□□□□□ -0.59
MS4A6A-220ENST00000533989 RGPD1P0DJD0 1748 aa11.35□□□□□ -0.59
MS4A6A-220ENST00000533989 EVC2Q86UK5 1308 aa11.35□□□□□ -0.59
MS4A6A-220ENST00000533989 EN1Q05925 392 aaPredicted RBP11.34□□□□□ -0.59
MS4A6A-220ENST00000533989 FAM182BQ5T319 152 aa11.34□□□□□ -0.59
MS4A6A-220ENST00000533989 LARP1Q6PKG0 1096 aaKnown RBP11.34□□□□□ -0.59
MS4A6A-220ENST00000533989 CAMKK2Q96RR4 588 aa11.34□□□□□ -0.59
MS4A6A-220ENST00000533989 SLIT3O75094 1523 aa11.34□□□□□ -0.59
MS4A6A-220ENST00000533989 COL5A2P05997 1499 aaPredicted RBP11.33□□□□□ -0.6
MS4A6A-220ENST00000533989 C11orf95C9JLR9 678 aaPredicted RBP11.33□□□□□ -0.6
MS4A6A-220ENST00000533989 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
MS4A6A-220ENST00000533989 TNS1Q9HBL0 1735 aaKnown RBP11.32□□□□□ -0.6
MS4A6A-220ENST00000533989 PDE3BQ13370 1112 aa11.32□□□□□ -0.6
MS4A6A-220ENST00000533989 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
MS4A6A-220ENST00000533989 QRICH2Q9H0J4 1663 aa11.32□□□□□ -0.6
MS4A6A-220ENST00000533989 CRB1P82279 1406 aa11.32□□□□□ -0.6
MS4A6A-220ENST00000533989 TRPM1Q7Z4N2 1603 aa11.31□□□□□ -0.6
MS4A6A-220ENST00000533989 SBNO2Q9Y2G9 1366 aa11.31□□□□□ -0.6
MS4A6A-220ENST00000533989 TRIM37O94972 964 aa11.31□□□□□ -0.6
MS4A6A-220ENST00000533989 NLRP6P59044 892 aa11.31□□□□□ -0.6
MS4A6A-220ENST00000533989 USP35Q9P2H5 1018 aa11.31□□□□□ -0.6
MS4A6A-220ENST00000533989 ROCK2O75116 1388 aaKnown RBP11.3□□□□□ -0.6
MS4A6A-220ENST00000533989 CPSF1Q10570 1443 aaKnown RBP11.3□□□□□ -0.6
MS4A6A-220ENST00000533989 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
MS4A6A-220ENST00000533989 EZH2Q15910 746 aaKnown RBP11.3□□□□□ -0.6
MS4A6A-220ENST00000533989 SIN3AQ96ST3 1273 aa11.3□□□□□ -0.6
MS4A6A-220ENST00000533989 TTC21AQ8NDW8 1320 aa11.3□□□□□ -0.6
MS4A6A-220ENST00000533989 APBA3O96018 575 aa11.29□□□□□ -0.6
MS4A6A-220ENST00000533989 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
MS4A6A-220ENST00000533989 BCL9O00512 1426 aa11.28□□□□□ -0.6
MS4A6A-220ENST00000533989 R3HDM1Q15032 1099 aaKnown RBP11.28□□□□□ -0.6
MS4A6A-220ENST00000533989 ARHGEF25Q86VW2 580 aa11.28□□□□□ -0.6
MS4A6A-220ENST00000533989 KCNH5Q8NCM2 988 aa11.28□□□□□ -0.6
MS4A6A-220ENST00000533989 CDCA7Q9BWT1 371 aaPredicted RBP11.28□□□□□ -0.6
MS4A6A-220ENST00000533989 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
MS4A6A-220ENST00000533989 WDR17Q8IZU2 1322 aa11.28□□□□□ -0.6
MS4A6A-220ENST00000533989 PIK3C2AO00443 1686 aa11.27□□□□□ -0.6
MS4A6A-220ENST00000533989 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
MS4A6A-220ENST00000533989 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
MS4A6A-220ENST00000533989 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
MS4A6A-220ENST00000533989 ABCC6O95255 1503 aa11.26□□□□□ -0.61
MS4A6A-220ENST00000533989 AXIN2Q9Y2T1 843 aa11.26□□□□□ -0.61
MS4A6A-220ENST00000533989 COL18A1P39060 1754 aa11.26□□□□□ -0.61
MS4A6A-220ENST00000533989 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
MS4A6A-220ENST00000533989 DDB1Q16531 1140 aa11.25□□□□□ -0.61
MS4A6A-220ENST00000533989 TOM1L2Q6ZVM7 507 aa11.25□□□□□ -0.61
MS4A6A-220ENST00000533989 PUS7Q96PZ0 661 aaKnown RBP11.25□□□□□ -0.61
MS4A6A-220ENST00000533989 CARD10Q9BWT7 1032 aa11.25□□□□□ -0.61
MS4A6A-220ENST00000533989 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
MS4A6A-220ENST00000533989 USP31Q70CQ4 1352 aa11.25□□□□□ -0.61
MS4A6A-220ENST00000533989 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
MS4A6A-220ENST00000533989 NFAT5O94916 1531 aa11.25□□□□□ -0.61
MS4A6A-220ENST00000533989 RREB1Q92766 1687 aa11.24□□□□□ -0.61
MS4A6A-220ENST00000533989 PLSCR1O15162 318 aa11.24□□□□□ -0.61
MS4A6A-220ENST00000533989 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
MS4A6A-220ENST00000533989 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
MS4A6A-220ENST00000533989 NBPF14Q5TI25 921 aa11.23□□□□□ -0.61
MS4A6A-220ENST00000533989 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
MS4A6A-220ENST00000533989 CD163L1Q9NR16 1453 aa11.23□□□□□ -0.61
MS4A6A-220ENST00000533989 LRRC37A3O60309 1634 aa11.22□□□□□ -0.61
MS4A6A-220ENST00000533989 AKAP12Q02952 1782 aa11.22□□□□□ -0.61
MS4A6A-220ENST00000533989 MARCH10Q8NA82 808 aaPredicted RBP11.22□□□□□ -0.61
MS4A6A-220ENST00000533989 CCDC7Q96M83 1385 aa11.22□□□□□ -0.61
MS4A6A-220ENST00000533989 CARD11Q9BXL7 1154 aa11.22□□□□□ -0.61
MS4A6A-220ENST00000533989 RGPD3A6NKT7 1758 aaPredicted RBP11.21□□□□□ -0.61
MS4A6A-220ENST00000533989 RGPD4Q7Z3J3 1758 aa11.21□□□□□ -0.61
MS4A6A-220ENST00000533989 ZBTB7CA1YPR0 619 aa11.21□□□□□ -0.61
MS4A6A-220ENST00000533989 NUP188Q5SRE5 1749 aa11.21□□□□□ -0.62
MS4A6A-220ENST00000533989 USP54Q70EL1 1684 aa11.2□□□□□ -0.62
MS4A6A-220ENST00000533989 EDC4Q6P2E9 1401 aaKnown RBP11.2□□□□□ -0.62
MS4A6A-220ENST00000533989 ERBB3P21860 1342 aa11.19□□□□□ -0.62
MS4A6A-220ENST00000533989 MON2Q7Z3U7 1717 aa11.19□□□□□ -0.62
MS4A6A-220ENST00000533989 SLC24A1O60721 1099 aa11.19□□□□□ -0.62
MS4A6A-220ENST00000533989 TERF2IPQ9NYB0 399 aa11.19□□□□□ -0.62
MS4A6A-220ENST00000533989 SSUH2Q9Y2M2 353 aa11.19□□□□□ -0.62
MS4A6A-220ENST00000533989 TONSLQ96HA7 1378 aa11.18□□□□□ -0.62
MS4A6A-220ENST00000533989 NINLQ9Y2I6 1382 aa11.18□□□□□ -0.62
MS4A6A-220ENST00000533989 EXOC5O00471 708 aa11.18□□□□□ -0.62
MS4A6A-220ENST00000533989 CSB-PGBD3P0DP91 1061 aa11.18□□□□□ -0.62
MS4A6A-220ENST00000533989 HDGFL2Q7Z4V5 671 aaPredicted RBP11.18□□□□□ -0.62
MS4A6A-220ENST00000533989 TNS2Q63HR2 1409 aa11.18□□□□□ -0.62
MS4A6A-220ENST00000533989 WNK3Q9BYP7 1800 aa11.17□□□□□ -0.62
MS4A6A-220ENST00000533989 SOX12O15370 315 aa11.17□□□□□ -0.62
MS4A6A-220ENST00000533989 PTF1AQ7RTS3 328 aa11.17□□□□□ -0.62
MS4A6A-220ENST00000533989 NME9Q86XW9 330 aa11.17□□□□□ -0.62
MS4A6A-220ENST00000533989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.17□□□□□ -0.62
MS4A6A-220ENST00000533989 PROM2Q8N271 834 aa11.17□□□□□ -0.62
MS4A6A-220ENST00000533989 TESK2Q96S53 571 aa11.17□□□□□ -0.62
MS4A6A-220ENST00000533989 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
MS4A6A-220ENST00000533989 SPON1Q9HCB6 807 aa11.17□□□□□ -0.62
MS4A6A-220ENST00000533989 A0A1W2PP64 1363 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms