RNA–Protein interactions for RNA: ENST00000533588.1

AP001189.4-201, humanhuman

TSL 3 BASIC

Gene AP001189.4, Length 452 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001189.4-201ENST00000533588 CDCA7Q9BWT1 371 aaPredicted RBP13.35□□□□□ -0.27
AP001189.4-201ENST00000533588 WDR17Q8IZU2 1322 aa13.35□□□□□ -0.27
AP001189.4-201ENST00000533588 FAM196AQ6ZSG2 479 aa13.34□□□□□ -0.27
AP001189.4-201ENST00000533588 NME9Q86XW9 330 aa13.34□□□□□ -0.27
AP001189.4-201ENST00000533588 AXIN2Q9Y2T1 843 aa13.33□□□□□ -0.28
AP001189.4-201ENST00000533588 BRWD3Q6RI45 1802 aa13.33□□□□□ -0.28
AP001189.4-201ENST00000533588 COL18A1P39060 1754 aa13.32□□□□□ -0.28
AP001189.4-201ENST00000533588 OVOS2A0A0J9YW53 1432 aa13.32□□□□□ -0.28
AP001189.4-201ENST00000533588 OVOS2Q6IE36 1432 aa13.32□□□□□ -0.28
AP001189.4-201ENST00000533588 PDE3BQ13370 1112 aa13.32□□□□□ -0.28
AP001189.4-201ENST00000533588 CARD10Q9BWT7 1032 aa13.32□□□□□ -0.28
AP001189.4-201ENST00000533588 USP35Q9P2H5 1018 aa13.32□□□□□ -0.28
AP001189.4-201ENST00000533588 TOM1L2Q6ZVM7 507 aa13.31□□□□□ -0.28
AP001189.4-201ENST00000533588 COG3Q96JB2 828 aa13.31□□□□□ -0.28
AP001189.4-201ENST00000533588 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
AP001189.4-201ENST00000533588 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
AP001189.4-201ENST00000533588 BAG6P46379 1132 aa13.3□□□□□ -0.28
AP001189.4-201ENST00000533588 EIF4G2P78344 907 aaKnown RBP eCLIP13.3□□□□□ -0.28
AP001189.4-201ENST00000533588 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
AP001189.4-201ENST00000533588 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
AP001189.4-201ENST00000533588 SOX12O15370 315 aa13.28□□□□□ -0.28
AP001189.4-201ENST00000533588 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
AP001189.4-201ENST00000533588 ERBB3P21860 1342 aa13.28□□□□□ -0.28
AP001189.4-201ENST00000533588 BCL9O00512 1426 aa13.28□□□□□ -0.28
AP001189.4-201ENST00000533588 PARP4Q9UKK3 1724 aaKnown RBP13.27□□□□□ -0.28
AP001189.4-201ENST00000533588 FYB1O15117 783 aa13.27□□□□□ -0.29
AP001189.4-201ENST00000533588 DDB1Q16531 1140 aa13.27□□□□□ -0.29
AP001189.4-201ENST00000533588 IP6K1Q92551 441 aa13.27□□□□□ -0.29
AP001189.4-201ENST00000533588 PARD3Q8TEW0 1356 aa13.27□□□□□ -0.29
AP001189.4-201ENST00000533588 KIF24Q5T7B8 1368 aa13.26□□□□□ -0.29
AP001189.4-201ENST00000533588 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
AP001189.4-201ENST00000533588 OVOS2A0A0G2JMS6 1433 aa13.25□□□□□ -0.29
AP001189.4-201ENST00000533588 RTL1A6NKG5 1358 aa13.25□□□□□ -0.29
AP001189.4-201ENST00000533588 DEFB132Q7Z7B7 95 aa13.25□□□□□ -0.29
AP001189.4-201ENST00000533588 EXOC5O00471 708 aa13.24□□□□□ -0.29
AP001189.4-201ENST00000533588 FAM182BQ5T319 152 aa13.24□□□□□ -0.29
AP001189.4-201ENST00000533588 ANKRD24Q8TF21 1146 aa13.24□□□□□ -0.29
AP001189.4-201ENST00000533588 MAP3K19Q56UN5 1328 aa13.23□□□□□ -0.29
AP001189.4-201ENST00000533588 TRIM37O94972 964 aa13.23□□□□□ -0.29
AP001189.4-201ENST00000533588 CARD14Q9BXL6 1004 aa13.23□□□□□ -0.29
AP001189.4-201ENST00000533588 HSPA5P11021 654 aaKnown RBP13.22□□□□□ -0.29
AP001189.4-201ENST00000533588 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
AP001189.4-201ENST00000533588 LRRC37A3O60309 1634 aa13.21□□□□□ -0.29
AP001189.4-201ENST00000533588 CGNL1Q0VF96 1302 aa13.21□□□□□ -0.29
AP001189.4-201ENST00000533588 IL2RBP14784 551 aa13.21□□□□□ -0.29
AP001189.4-201ENST00000533588 HOXC9P31274 260 aa13.21□□□□□ -0.29
AP001189.4-201ENST00000533588 AMPHP49418 695 aa13.21□□□□□ -0.29
AP001189.4-201ENST00000533588 CAMKK2Q96RR4 588 aa13.21□□□□□ -0.29
AP001189.4-201ENST00000533588 GGNBP2Q9H3C7 697 aa13.21□□□□□ -0.29
AP001189.4-201ENST00000533588 LTN1O94822 1766 aa13.2□□□□□ -0.3
AP001189.4-201ENST00000533588 APBA3O96018 575 aa13.2□□□□□ -0.3
AP001189.4-201ENST00000533588 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
AP001189.4-201ENST00000533588 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
AP001189.4-201ENST00000533588 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
AP001189.4-201ENST00000533588 MYOM1P52179 1685 aa13.2□□□□□ -0.3
AP001189.4-201ENST00000533588 TNS2Q63HR2 1409 aa13.2□□□□□ -0.3
AP001189.4-201ENST00000533588 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
AP001189.4-201ENST00000533588 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
AP001189.4-201ENST00000533588 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
AP001189.4-201ENST00000533588 FAM208AQ9UK61 1670 aaKnown RBP13.19□□□□□ -0.3
AP001189.4-201ENST00000533588 PLSCR1O15162 318 aa13.19□□□□□ -0.3
AP001189.4-201ENST00000533588 INSRP06213 1382 aa13.19□□□□□ -0.3
AP001189.4-201ENST00000533588 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
AP001189.4-201ENST00000533588 RGPD5Q99666 1765 aa13.18□□□□□ -0.3
AP001189.4-201ENST00000533588 SRCAPQ6ZRS2 3230 aa13.18□□□□□ -0.3
AP001189.4-201ENST00000533588 FLT4P35916 1363 aa13.18□□□□□ -0.3
AP001189.4-201ENST00000533588 SMG6Q86US8 1419 aaKnown RBP13.17□□□□□ -0.3
AP001189.4-201ENST00000533588 NSD2O96028 1365 aa13.17□□□□□ -0.3
AP001189.4-201ENST00000533588 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
AP001189.4-201ENST00000533588 RRS1Q15050 365 aaKnown RBP13.15□□□□□ -0.3
AP001189.4-201ENST00000533588 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
AP001189.4-201ENST00000533588 KIF20BQ96Q89 1820 aa13.15□□□□□ -0.3
AP001189.4-201ENST00000533588 FBLN1P23142 703 aa13.14□□□□□ -0.31
AP001189.4-201ENST00000533588 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
AP001189.4-201ENST00000533588 PANK3Q9H999 370 aa13.14□□□□□ -0.31
AP001189.4-201ENST00000533588 RGPD3A6NKT7 1758 aaPredicted RBP13.14□□□□□ -0.31
AP001189.4-201ENST00000533588 RGPD4Q7Z3J3 1758 aa13.14□□□□□ -0.31
AP001189.4-201ENST00000533588 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
AP001189.4-201ENST00000533588 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
AP001189.4-201ENST00000533588 PLEKHG2Q9H7P9 1386 aa13.12□□□□□ -0.31
AP001189.4-201ENST00000533588 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
AP001189.4-201ENST00000533588 ZCRB1Q8TBF4 217 aaKnown RBP13.12□□□□□ -0.31
AP001189.4-201ENST00000533588 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
AP001189.4-201ENST00000533588 POLR3GLQ9BT43 218 aa13.11□□□□□ -0.31
AP001189.4-201ENST00000533588 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
AP001189.4-201ENST00000533588 RREB1Q92766 1687 aa13.11□□□□□ -0.31
AP001189.4-201ENST00000533588 RAPGEF4Q8WZA2 1011 aa13.1□□□□□ -0.31
AP001189.4-201ENST00000533588 KNSTRNQ9Y448 316 aa13.1□□□□□ -0.31
AP001189.4-201ENST00000533588 NCAPD2Q15021 1401 aa13.1□□□□□ -0.31
AP001189.4-201ENST00000533588 SBF2Q86WG5 1849 aa13.09□□□□□ -0.31
AP001189.4-201ENST00000533588 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
AP001189.4-201ENST00000533588 ANKRD26Q9UPS8 1709 aa13.09□□□□□ -0.31
AP001189.4-201ENST00000533588 EMILIN1Q9Y6C2 1016 aa13.09□□□□□ -0.31
AP001189.4-201ENST00000533588 KIF7Q2M1P5 1343 aa13.09□□□□□ -0.31
AP001189.4-201ENST00000533588 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.32
AP001189.4-201ENST00000533588 NHSQ6T4R5 1651 aa13.08□□□□□ -0.32
AP001189.4-201ENST00000533588 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
AP001189.4-201ENST00000533588 KCNQ2O43526 872 aa13.07□□□□□ -0.32
AP001189.4-201ENST00000533588 HMGB2P26583 209 aaKnown RBP13.07□□□□□ -0.32
AP001189.4-201ENST00000533588 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms