RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CCDC9Q9Y3X0 531 aaKnown RBP23.59■■□□□ 1.37
NXF1-216ENST00000533499 PPP2R1AP30153 589 aa23.58■■□□□ 1.37
NXF1-216ENST00000533499 HOXC9P31274 260 aa23.58■■□□□ 1.37
NXF1-216ENST00000533499 MTHFSP49914 203 aa23.58■■□□□ 1.37
NXF1-216ENST00000533499 IP6K1Q92551 441 aa23.58■■□□□ 1.37
NXF1-216ENST00000533499 AXIN2Q9Y2T1 843 aa23.58■■□□□ 1.37
NXF1-216ENST00000533499 RGPD5Q99666 1765 aa23.57■■□□□ 1.36
NXF1-216ENST00000533499 PARD3Q8TEW0 1356 aa23.57■■□□□ 1.36
NXF1-216ENST00000533499 FLT4P35916 1363 aa23.56■■□□□ 1.36
NXF1-216ENST00000533499 HSP90AB2PQ58FF8 381 aa23.56■■□□□ 1.36
NXF1-216ENST00000533499 DIEXFQ68CQ4 756 aaKnown RBP23.56■■□□□ 1.36
NXF1-216ENST00000533499 PRKRIP1Q9H875 184 aaPredicted RBP23.56■■□□□ 1.36
NXF1-216ENST00000533499 CAMTA1Q9Y6Y1 1673 aa23.55■■□□□ 1.36
NXF1-216ENST00000533499 PEAK1Q9H792 1746 aa23.55■■□□□ 1.36
NXF1-216ENST00000533499 RTL1A6NKG5 1358 aa23.54■■□□□ 1.36
NXF1-216ENST00000533499 UNC5CLQ8IV45 518 aa23.54■■□□□ 1.36
NXF1-216ENST00000533499 FNBP4Q8N3X1 1017 aaPredicted RBP23.54■■□□□ 1.36
NXF1-216ENST00000533499 ANKRD24Q8TF21 1146 aa23.54■■□□□ 1.36
NXF1-216ENST00000533499 COL18A1P39060 1754 aa23.54■■□□□ 1.36
NXF1-216ENST00000533499 SLIT2O94813 1529 aa23.54■■□□□ 1.36
NXF1-216ENST00000533499 LMO7Q8WWI1 1683 aa23.53■■□□□ 1.36
NXF1-216ENST00000533499 ZNF772Q68DY9 489 aaPredicted RBP23.52■■□□□ 1.36
NXF1-216ENST00000533499 NWD2Q9ULI1 1742 aa23.52■■□□□ 1.36
NXF1-216ENST00000533499 TOM1L2Q6ZVM7 507 aa23.51■■□□□ 1.35
NXF1-216ENST00000533499 CFAP53Q96M91 514 aa23.51■■□□□ 1.35
NXF1-216ENST00000533499 NLRP2Q9NX02 1062 aa23.51■■□□□ 1.35
NXF1-216ENST00000533499 USP35Q9P2H5 1018 aa23.51■■□□□ 1.35
NXF1-216ENST00000533499 MYBBP1AQ9BQG0 1328 aaKnown RBP23.51■■□□□ 1.35
NXF1-216ENST00000533499 BLMP54132 1417 aaPredicted RBP23.5■■□□□ 1.35
NXF1-216ENST00000533499 COL5A2P05997 1499 aaPredicted RBP23.5■■□□□ 1.35
NXF1-216ENST00000533499 LARP1Q6PKG0 1096 aaKnown RBP23.5■■□□□ 1.35
NXF1-216ENST00000533499 KIF24Q5T7B8 1368 aa23.5■■□□□ 1.35
NXF1-216ENST00000533499 SMG6Q86US8 1419 aaKnown RBP23.5■■□□□ 1.35
NXF1-216ENST00000533499 BCL9LQ86UU0 1499 aa23.49■■□□□ 1.35
NXF1-216ENST00000533499 QTRT2Q9H974 415 aaKnown RBP23.49■■□□□ 1.35
NXF1-216ENST00000533499 TRPC5Q9UL62 973 aaPredicted RBP23.49■■□□□ 1.35
NXF1-216ENST00000533499 INSRP06213 1382 aa23.49■■□□□ 1.35
NXF1-216ENST00000533499 ABCC6O95255 1503 aa23.49■■□□□ 1.35
NXF1-216ENST00000533499 NRAPQ86VF7 1730 aa23.48■■□□□ 1.35
NXF1-216ENST00000533499 CDK12Q9NYV4 1490 aaPredicted RBP23.48■■□□□ 1.35
NXF1-216ENST00000533499 ERBB3P21860 1342 aa23.47■■□□□ 1.35
NXF1-216ENST00000533499 WDR17Q8IZU2 1322 aa23.47■■□□□ 1.35
NXF1-216ENST00000533499 EIF4A2Q14240 407 aaKnown RBP23.45■■□□□ 1.34
NXF1-216ENST00000533499 VPS72Q15906 364 aa23.45■■□□□ 1.34
NXF1-216ENST00000533499 DIAPH1O60610 1272 aaKnown RBP23.44■■□□□ 1.34
NXF1-216ENST00000533499 USHBP1Q8N6Y0 703 aa23.44■■□□□ 1.34
NXF1-216ENST00000533499 RGS17Q9UGC6 210 aaPredicted RBP23.44■■□□□ 1.34
NXF1-216ENST00000533499 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.43■■□□□ 1.34
NXF1-216ENST00000533499 A0A0G2JS52 829 aa23.43■■□□□ 1.34
NXF1-216ENST00000533499 U2SURPO15042 1029 aaKnown RBP23.43■■□□□ 1.34
NXF1-216ENST00000533499 MYT1Q01538 1121 aa23.43■■□□□ 1.34
NXF1-216ENST00000533499 CRB1P82279 1406 aa23.42■■□□□ 1.34
NXF1-216ENST00000533499 RGPD2P0DJD1 1756 aa23.42■■□□□ 1.34
NXF1-216ENST00000533499 GJD4Q96KN9 370 aaPredicted RBP23.41■■□□□ 1.34
NXF1-216ENST00000533499 ATRNO75882 1429 aa23.41■■□□□ 1.34
NXF1-216ENST00000533499 SPATA31A5Q5VU36 1347 aa23.4■■□□□ 1.34
NXF1-216ENST00000533499 SPATA31A7Q8IWB4 1347 aa23.4■■□□□ 1.34
NXF1-216ENST00000533499 NBPF6Q5VWK0 638 aa23.4■■□□□ 1.34
NXF1-216ENST00000533499 POTEAQ6S8J7 498 aa23.4■■□□□ 1.34
NXF1-216ENST00000533499 NBPF4Q96M43 638 aa23.4■■□□□ 1.34
NXF1-216ENST00000533499 SPATA31A1Q5TZJ5 1347 aa23.39■■□□□ 1.34
NXF1-216ENST00000533499 CARD10Q9BWT7 1032 aa23.39■■□□□ 1.33
NXF1-216ENST00000533499 NUDCQ9Y266 331 aa23.39■■□□□ 1.33
NXF1-216ENST00000533499 IL13P35225 146 aa23.38■■□□□ 1.33
NXF1-216ENST00000533499 FAM98CQ17RN3 349 aaKnown RBP23.38■■□□□ 1.33
NXF1-216ENST00000533499 TCP11L2Q8N4U5 519 aa23.38■■□□□ 1.33
NXF1-216ENST00000533499 EYA1Q99502 592 aa23.38■■□□□ 1.33
NXF1-216ENST00000533499 RXRBP28702 533 aa23.37■■□□□ 1.33
NXF1-216ENST00000533499 RBM6P78332 1123 aaKnown RBP23.37■■□□□ 1.33
NXF1-216ENST00000533499 FAM208AQ9UK61 1670 aaKnown RBP23.37■■□□□ 1.33
NXF1-216ENST00000533499 MRS2Q9HD23 443 aa23.36■■□□□ 1.33
NXF1-216ENST00000533499 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
NXF1-216ENST00000533499 HMOX1P09601 288 aa23.34■■□□□ 1.33
NXF1-216ENST00000533499 U2AF1L5P0DN76 240 aaPredicted RBP23.34■■□□□ 1.33
NXF1-216ENST00000533499 U2AF1Q01081 240 aaKnown RBP eCLIP23.34■■□□□ 1.33
NXF1-216ENST00000533499 CCDC184Q52MB2 194 aa23.34■■□□□ 1.33
NXF1-216ENST00000533499 MIER1Q8N108 512 aa23.34■■□□□ 1.33
NXF1-216ENST00000533499 GLI3P10071 1580 aa23.33■■□□□ 1.33
NXF1-216ENST00000533499 SULT6B1Q6IMI4 303 aa23.33■■□□□ 1.33
NXF1-216ENST00000533499 WDR43Q15061 677 aaKnown RBP eCLIP23.32■■□□□ 1.32
NXF1-216ENST00000533499 AEBP1Q8IUX7 1158 aa23.32■■□□□ 1.32
NXF1-216ENST00000533499 RAPGEF4Q8WZA2 1011 aa23.32■■□□□ 1.32
NXF1-216ENST00000533499 THRAP3Q9Y2W1 955 aaKnown RBP23.31■■□□□ 1.32
NXF1-216ENST00000533499 IGSF1Q8N6C5 1336 aa23.31■■□□□ 1.32
NXF1-216ENST00000533499 IL2RBP14784 551 aa23.3■■□□□ 1.32
NXF1-216ENST00000533499 TATP17735 454 aaPredicted RBP23.29■■□□□ 1.32
NXF1-216ENST00000533499 BARGINQ6ZT62 677 aa23.28■■□□□ 1.32
NXF1-216ENST00000533499 SEPT12Q8IYM1 358 aa23.28■■□□□ 1.32
NXF1-216ENST00000533499 CDCA7Q9BWT1 371 aaPredicted RBP23.26■■□□□ 1.31
NXF1-216ENST00000533499 RGPD1P0DJD0 1748 aa23.25■■□□□ 1.31
NXF1-216ENST00000533499 DDB1Q16531 1140 aa23.24■■□□□ 1.31
NXF1-216ENST00000533499 WNK3Q9BYP7 1800 aa23.24■■□□□ 1.31
NXF1-216ENST00000533499 MEGF6O75095 1541 aa23.23■■□□□ 1.31
NXF1-216ENST00000533499 EXOC5O00471 708 aa23.23■■□□□ 1.31
NXF1-216ENST00000533499 PRKAR2BP31323 418 aa23.22■■□□□ 1.31
NXF1-216ENST00000533499 PDE3BQ13370 1112 aa23.22■■□□□ 1.31
NXF1-216ENST00000533499 CCER2I3L3R5 266 aa23.21■■□□□ 1.31
NXF1-216ENST00000533499 NEFMP07197 916 aa23.21■■□□□ 1.31
NXF1-216ENST00000533499 FAM9BQ8IZU0 186 aa23.21■■□□□ 1.31
NXF1-216ENST00000533499 RGS12O14924 1447 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms