RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 OVOS2A0A0J9YW53 1432 aa17.99■□□□□ 0.47
TRAPPC4-212ENST00000533058 BLMP54132 1417 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC4-212ENST00000533058 CRB1P82279 1406 aa17.99■□□□□ 0.47
TRAPPC4-212ENST00000533058 OVOS2Q6IE36 1432 aa17.99■□□□□ 0.47
TRAPPC4-212ENST00000533058 ABCC6O95255 1503 aa17.99■□□□□ 0.47
TRAPPC4-212ENST00000533058 COL18A1P39060 1754 aa17.99■□□□□ 0.47
TRAPPC4-212ENST00000533058 BRWD3Q6RI45 1802 aa17.98■□□□□ 0.47
TRAPPC4-212ENST00000533058 WDR17Q8IZU2 1322 aa17.98■□□□□ 0.47
TRAPPC4-212ENST00000533058 ZBTB7CA1YPR0 619 aa17.97■□□□□ 0.47
TRAPPC4-212ENST00000533058 USP35Q9P2H5 1018 aa17.97■□□□□ 0.47
TRAPPC4-212ENST00000533058 EP400Q96L91 3159 aa17.97■□□□□ 0.47
TRAPPC4-212ENST00000533058 SOX12O15370 315 aa17.96■□□□□ 0.47
TRAPPC4-212ENST00000533058 TOM1L2Q6ZVM7 507 aa17.95■□□□□ 0.46
TRAPPC4-212ENST00000533058 COG3Q96JB2 828 aa17.95■□□□□ 0.46
TRAPPC4-212ENST00000533058 POLR3GLQ9BT43 218 aa17.94■□□□□ 0.46
TRAPPC4-212ENST00000533058 CDCA7Q9BWT1 371 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC4-212ENST00000533058 CARD10Q9BWT7 1032 aa17.94■□□□□ 0.46
TRAPPC4-212ENST00000533058 FYB1O15117 783 aa17.93■□□□□ 0.46
TRAPPC4-212ENST00000533058 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
TRAPPC4-212ENST00000533058 C11orf95C9JLR9 678 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC4-212ENST00000533058 PDE3BQ13370 1112 aa17.92■□□□□ 0.46
TRAPPC4-212ENST00000533058 SF3B2Q13435 895 aaKnown RBP17.92■□□□□ 0.46
TRAPPC4-212ENST00000533058 ERBB3P21860 1342 aa17.91■□□□□ 0.46
TRAPPC4-212ENST00000533058 CSB-PGBD3P0DP91 1061 aa17.9■□□□□ 0.46
TRAPPC4-212ENST00000533058 IP6K1Q92551 441 aa17.9■□□□□ 0.46
TRAPPC4-212ENST00000533058 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
TRAPPC4-212ENST00000533058 CCDC7Q96M83 1385 aa17.9■□□□□ 0.46
TRAPPC4-212ENST00000533058 FAM182BQ5T319 152 aa17.88■□□□□ 0.45
TRAPPC4-212ENST00000533058 PARP4Q9UKK3 1724 aaKnown RBP17.87■□□□□ 0.45
TRAPPC4-212ENST00000533058 BAG6P46379 1132 aa17.87■□□□□ 0.45
TRAPPC4-212ENST00000533058 DDB1Q16531 1140 aa17.87■□□□□ 0.45
TRAPPC4-212ENST00000533058 GGNBP2Q9H3C7 697 aa17.87■□□□□ 0.45
TRAPPC4-212ENST00000533058 DEFB132Q7Z7B7 95 aa17.86■□□□□ 0.45
TRAPPC4-212ENST00000533058 ANKRD24Q8TF21 1146 aa17.86■□□□□ 0.45
TRAPPC4-212ENST00000533058 MAP3K19Q56UN5 1328 aa17.86■□□□□ 0.45
TRAPPC4-212ENST00000533058 DISP2A7MBM2 1401 aa17.86■□□□□ 0.45
TRAPPC4-212ENST00000533058 MYOM1P52179 1685 aa17.86■□□□□ 0.45
TRAPPC4-212ENST00000533058 NSD3Q9BZ95 1437 aa17.85■□□□□ 0.45
TRAPPC4-212ENST00000533058 RTL1A6NKG5 1358 aa17.84■□□□□ 0.45
TRAPPC4-212ENST00000533058 HOXC9P31274 260 aa17.84■□□□□ 0.45
TRAPPC4-212ENST00000533058 RGPD5Q99666 1765 aa17.84■□□□□ 0.45
TRAPPC4-212ENST00000533058 BCL9O00512 1426 aa17.83■□□□□ 0.45
TRAPPC4-212ENST00000533058 KIF24Q5T7B8 1368 aa17.83■□□□□ 0.45
TRAPPC4-212ENST00000533058 CGNL1Q0VF96 1302 aa17.83■□□□□ 0.44
TRAPPC4-212ENST00000533058 AMPHP49418 695 aa17.83■□□□□ 0.44
TRAPPC4-212ENST00000533058 NLRP2Q9NX02 1062 aa17.83■□□□□ 0.44
TRAPPC4-212ENST00000533058 LTN1O94822 1766 aa17.83■□□□□ 0.44
TRAPPC4-212ENST00000533058 EXOC5O00471 708 aa17.82■□□□□ 0.44
TRAPPC4-212ENST00000533058 FBLN1P23142 703 aa17.82■□□□□ 0.44
TRAPPC4-212ENST00000533058 OVOS2A0A0G2JMS6 1433 aa17.81■□□□□ 0.44
TRAPPC4-212ENST00000533058 TRIM37O94972 964 aa17.81■□□□□ 0.44
TRAPPC4-212ENST00000533058 RGPD1P0DJD0 1748 aa17.81■□□□□ 0.44
TRAPPC4-212ENST00000533058 IL2RBP14784 551 aa17.8■□□□□ 0.44
TRAPPC4-212ENST00000533058 RRS1Q15050 365 aaKnown RBP17.8■□□□□ 0.44
TRAPPC4-212ENST00000533058 LRRC37A3O60309 1634 aa17.8■□□□□ 0.44
TRAPPC4-212ENST00000533058 MARCH10Q8NA82 808 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC4-212ENST00000533058 PARD3Q8TEW0 1356 aa17.79■□□□□ 0.44
TRAPPC4-212ENST00000533058 EN1Q05925 392 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC4-212ENST00000533058 CAMKK2Q96RR4 588 aa17.78■□□□□ 0.44
TRAPPC4-212ENST00000533058 PANK3Q9H999 370 aa17.78■□□□□ 0.44
TRAPPC4-212ENST00000533058 INSRP06213 1382 aa17.78■□□□□ 0.44
TRAPPC4-212ENST00000533058 WNK3Q9BYP7 1800 aa17.77■□□□□ 0.44
TRAPPC4-212ENST00000533058 KIF7Q2M1P5 1343 aa17.77■□□□□ 0.44
TRAPPC4-212ENST00000533058 APBA3O96018 575 aa17.77■□□□□ 0.44
TRAPPC4-212ENST00000533058 TNS2Q63HR2 1409 aa17.77■□□□□ 0.44
TRAPPC4-212ENST00000533058 PEAK1Q9H792 1746 aa17.77■□□□□ 0.44
TRAPPC4-212ENST00000533058 FLT4P35916 1363 aa17.77■□□□□ 0.43
TRAPPC4-212ENST00000533058 KIF20BQ96Q89 1820 aa17.77■□□□□ 0.43
TRAPPC4-212ENST00000533058 TNS1Q9HBL0 1735 aaKnown RBP17.75■□□□□ 0.43
TRAPPC4-212ENST00000533058 FAM208AQ9UK61 1670 aaKnown RBP17.75■□□□□ 0.43
TRAPPC4-212ENST00000533058 LTV1Q96GA3 475 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-212ENST00000533058 BCL11BQ9C0K0 894 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-212ENST00000533058 NSD2O96028 1365 aa17.74■□□□□ 0.43
TRAPPC4-212ENST00000533058 SMG6Q86US8 1419 aaKnown RBP17.73■□□□□ 0.43
TRAPPC4-212ENST00000533058 PLSCR1O15162 318 aa17.73■□□□□ 0.43
TRAPPC4-212ENST00000533058 EZH2Q15910 746 aaKnown RBP17.73■□□□□ 0.43
TRAPPC4-212ENST00000533058 HSP90AB2PQ58FF8 381 aa17.73■□□□□ 0.43
TRAPPC4-212ENST00000533058 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
TRAPPC4-212ENST00000533058 NBPF6Q5VWK0 638 aa17.72■□□□□ 0.43
TRAPPC4-212ENST00000533058 NBPF4Q96M43 638 aa17.72■□□□□ 0.43
TRAPPC4-212ENST00000533058 EMILIN1Q9Y6C2 1016 aa17.72■□□□□ 0.43
TRAPPC4-212ENST00000533058 POLKQ9UBT6 870 aa17.71■□□□□ 0.43
TRAPPC4-212ENST00000533058 KNSTRNQ9Y448 316 aa17.7■□□□□ 0.42
TRAPPC4-212ENST00000533058 ZCRB1Q8TBF4 217 aaKnown RBP17.67■□□□□ 0.42
TRAPPC4-212ENST00000533058 SBF2Q86WG5 1849 aa17.67■□□□□ 0.42
TRAPPC4-212ENST00000533058 NCAPD2Q15021 1401 aa17.66■□□□□ 0.42
TRAPPC4-212ENST00000533058 PER1O15534 1290 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-212ENST00000533058 AMER1Q5JTC6 1135 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-212ENST00000533058 PTF1AQ7RTS3 328 aa17.66■□□□□ 0.42
TRAPPC4-212ENST00000533058 RAPGEF4Q8WZA2 1011 aa17.66■□□□□ 0.42
TRAPPC4-212ENST00000533058 ANKRD26Q9UPS8 1709 aa17.66■□□□□ 0.42
TRAPPC4-212ENST00000533058 ZNF316A6NFI3 1004 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC4-212ENST00000533058 PPM1GO15355 546 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC4-212ENST00000533058 MEGF6O75095 1541 aa17.65■□□□□ 0.42
TRAPPC4-212ENST00000533058 RGPD3A6NKT7 1758 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC4-212ENST00000533058 RGPD4Q7Z3J3 1758 aa17.64■□□□□ 0.41
TRAPPC4-212ENST00000533058 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC4-212ENST00000533058 MORC1Q86VD1 984 aa17.64■□□□□ 0.41
TRAPPC4-212ENST00000533058 DDX54Q8TDD1 881 aaKnown RBP17.64■□□□□ 0.41
TRAPPC4-212ENST00000533058 KCNQ2O43526 872 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms