RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-215ENST00000531558 PANK3Q9H999 370 aa35.63■■■■□ 3.29
PICALM-215ENST00000531558 AXIN2Q9Y2T1 843 aa35.63■■■■□ 3.29
PICALM-215ENST00000531558 SPATA31A1Q5TZJ5 1347 aa35.62■■■■□ 3.29
PICALM-215ENST00000531558 LARP1Q6PKG0 1096 aaKnown RBP35.62■■■■□ 3.29
PICALM-215ENST00000531558 ONECUT3O60422 494 aaPredicted RBP35.61■■■■□ 3.29
PICALM-215ENST00000531558 CGNL1Q0VF96 1302 aa35.6■■■■□ 3.29
PICALM-215ENST00000531558 FAM98CQ17RN3 349 aaKnown RBP35.58■■■■□ 3.29
PICALM-215ENST00000531558 LTN1O94822 1766 aa35.58■■■■□ 3.29
PICALM-215ENST00000531558 CCDC7Q96M83 1385 aa35.57■■■■□ 3.28
PICALM-215ENST00000531558 SEPT12Q8IYM1 358 aa35.57■■■■□ 3.28
PICALM-215ENST00000531558 CRB1P82279 1406 aa35.56■■■■□ 3.28
PICALM-215ENST00000531558 WASHC2AQ641Q2 1341 aa35.54■■■■□ 3.28
PICALM-215ENST00000531558 WDR17Q8IZU2 1322 aa35.54■■■■□ 3.28
PICALM-215ENST00000531558 USP35Q9P2H5 1018 aa35.53■■■■□ 3.28
PICALM-215ENST00000531558 MAP3K19Q56UN5 1328 aa35.52■■■■□ 3.28
PICALM-215ENST00000531558 A0A0G2JS52 829 aa35.51■■■■□ 3.28
PICALM-215ENST00000531558 FBLN1P23142 703 aa35.51■■■■□ 3.28
PICALM-215ENST00000531558 MYT1Q01538 1121 aa35.51■■■■□ 3.28
PICALM-215ENST00000531558 THSD7AQ9UPZ6 1657 aa35.51■■■■□ 3.28
PICALM-215ENST00000531558 RGPD5Q99666 1765 aa35.51■■■■□ 3.27
PICALM-215ENST00000531558 TCP11L2Q8N4U5 519 aa35.5■■■■□ 3.27
PICALM-215ENST00000531558 BARGINQ6ZT62 677 aa35.49■■■■□ 3.27
PICALM-215ENST00000531558 TOM1L2Q6ZVM7 507 aa35.49■■■■□ 3.27
PICALM-215ENST00000531558 BLMP54132 1417 aaPredicted RBP35.49■■■■□ 3.27
PICALM-215ENST00000531558 CSB-PGBD3P0DP91 1061 aa35.48■■■■□ 3.27
PICALM-215ENST00000531558 IP6K1Q92551 441 aa35.48■■■■□ 3.27
PICALM-215ENST00000531558 THRAP3Q9Y2W1 955 aaKnown RBP35.48■■■■□ 3.27
PICALM-215ENST00000531558 ERBB3P21860 1342 aa35.48■■■■□ 3.27
PICALM-215ENST00000531558 RRS1Q15050 365 aaKnown RBP35.46■■■■□ 3.27
PICALM-215ENST00000531558 RTL1A6NKG5 1358 aa35.46■■■■□ 3.27
PICALM-215ENST00000531558 NSD2O96028 1365 aa35.45■■■■□ 3.27
PICALM-215ENST00000531558 BRWD3Q6RI45 1802 aa35.45■■■■□ 3.27
PICALM-215ENST00000531558 AMPHP49418 695 aa35.44■■■■□ 3.26
PICALM-215ENST00000531558 KNSTRNQ9Y448 316 aa35.44■■■■□ 3.26
PICALM-215ENST00000531558 HOXC9P31274 260 aa35.43■■■■□ 3.26
PICALM-215ENST00000531558 ANKRD26Q9UPS8 1709 aa35.43■■■■□ 3.26
PICALM-215ENST00000531558 ANKRD24Q8TF21 1146 aa35.42■■■■□ 3.26
PICALM-215ENST00000531558 CARD10Q9BWT7 1032 aa35.42■■■■□ 3.26
PICALM-215ENST00000531558 KRT27Q7Z3Y8 459 aa35.41■■■■□ 3.26
PICALM-215ENST00000531558 UPF1Q92900 1129 aaKnown RBP eCLIP35.41■■■■□ 3.26
PICALM-215ENST00000531558 EP400Q96L91 3159 aa35.4■■■■□ 3.26
PICALM-215ENST00000531558 KIF24Q5T7B8 1368 aa35.38■■■■□ 3.26
PICALM-215ENST00000531558 ZEB1P37275 1124 aaPredicted RBP35.38■■■■□ 3.25
PICALM-215ENST00000531558 AMER1Q5JTC6 1135 aaPredicted RBP35.35■■■■□ 3.25
PICALM-215ENST00000531558 NLRP2Q9NX02 1062 aa35.35■■■■□ 3.25
PICALM-215ENST00000531558 FLT4P35916 1363 aa35.35■■■■□ 3.25
PICALM-215ENST00000531558 PEAK1Q9H792 1746 aa35.35■■■■□ 3.25
PICALM-215ENST00000531558 PER1O15534 1290 aaPredicted RBP35.34■■■■□ 3.25
PICALM-215ENST00000531558 LTV1Q96GA3 475 aaPredicted RBP35.34■■■■□ 3.25
PICALM-215ENST00000531558 EMILIN1Q9Y6C2 1016 aa35.34■■■■□ 3.25
PICALM-215ENST00000531558 PARP4Q9UKK3 1724 aaKnown RBP35.32■■■■□ 3.25
PICALM-215ENST00000531558 WNK3Q9BYP7 1800 aa35.32■■■■□ 3.24
PICALM-215ENST00000531558 DISP2A7MBM2 1401 aa35.32■■■■□ 3.24
PICALM-215ENST00000531558 FAM208AQ9UK61 1670 aaKnown RBP35.31■■■■□ 3.24
PICALM-215ENST00000531558 INSRP06213 1382 aa35.3■■■■□ 3.24
PICALM-215ENST00000531558 TNNT2P45379 298 aaPredicted RBP35.3■■■■□ 3.24
PICALM-215ENST00000531558 CDCA7Q9BWT1 371 aaPredicted RBP35.3■■■■□ 3.24
PICALM-215ENST00000531558 HSP90AB2PQ58FF8 381 aa35.29■■■■□ 3.24
PICALM-215ENST00000531558 MORC1Q86VD1 984 aa35.29■■■■□ 3.24
PICALM-215ENST00000531558 POLKQ9UBT6 870 aa35.28■■■■□ 3.24
PICALM-215ENST00000531558 SMG6Q86US8 1419 aaKnown RBP35.27■■■■□ 3.24
PICALM-215ENST00000531558 LRRC37A3O60309 1634 aa35.27■■■■□ 3.24
PICALM-215ENST00000531558 PPM1GO15355 546 aaPredicted RBP35.26■■■■□ 3.24
PICALM-215ENST00000531558 PDE3BQ13370 1112 aa35.26■■■■□ 3.24
PICALM-215ENST00000531558 FAM182BQ5T319 152 aa35.24■■■■□ 3.23
PICALM-215ENST00000531558 DDB1Q16531 1140 aa35.23■■■■□ 3.23
PICALM-215ENST00000531558 NPC1L1Q9UHC9 1359 aa35.23■■■■□ 3.23
PICALM-215ENST00000531558 MAP2P11137 1827 aaKnown RBP35.22■■■■□ 3.23
PICALM-215ENST00000531558 IL2RBP14784 551 aa35.19■■■■□ 3.22
PICALM-215ENST00000531558 CCDC125Q86Z20 511 aa35.19■■■■□ 3.22
PICALM-215ENST00000531558 CC2D1BQ5T0F9 858 aaKnown RBP35.18■■■■□ 3.22
PICALM-215ENST00000531558 TNS2Q63HR2 1409 aa35.17■■■■□ 3.22
PICALM-215ENST00000531558 NBPF6Q5VWK0 638 aa35.17■■■■□ 3.22
PICALM-215ENST00000531558 NBPF4Q96M43 638 aa35.17■■■■□ 3.22
PICALM-215ENST00000531558 FAM196AQ6ZSG2 479 aa35.16■■■■□ 3.22
PICALM-215ENST00000531558 RGPD2P0DJD1 1756 aa35.15■■■■□ 3.22
PICALM-215ENST00000531558 EXOC5O00471 708 aa35.13■■■■□ 3.21
PICALM-215ENST00000531558 OVOS2A0A0G2JMS6 1433 aa35.13■■■■□ 3.21
PICALM-215ENST00000531558 USHBP1Q8N6Y0 703 aa35.11■■■■□ 3.21
PICALM-215ENST00000531558 MARCH10Q8NA82 808 aaPredicted RBP35.09■■■■□ 3.21
PICALM-215ENST00000531558 MEGF6O75095 1541 aa35.08■■■■□ 3.21
PICALM-215ENST00000531558 SF3B2Q13435 895 aaKnown RBP35.07■■■■□ 3.2
PICALM-215ENST00000531558 CNGB1Q14028 1251 aaPredicted RBP35.07■■■■□ 3.2
PICALM-215ENST00000531558 EIF4A2Q14240 407 aaKnown RBP35.07■■■■□ 3.2
PICALM-215ENST00000531558 NCAPD2Q15021 1401 aa35.06■■■■□ 3.2
PICALM-215ENST00000531558 RGPD1P0DJD0 1748 aa35.05■■■■□ 3.2
PICALM-215ENST00000531558 BCL9O00512 1426 aa35.04■■■■□ 3.2
PICALM-215ENST00000531558 TRIM37O94972 964 aa35.03■■■■□ 3.2
PICALM-215ENST00000531558 EYA1Q99502 592 aa35.03■■■■□ 3.2
PICALM-215ENST00000531558 RAPGEF4Q8WZA2 1011 aa35.02■■■■□ 3.2
PICALM-215ENST00000531558 MTHFSP49914 203 aa35■■■■□ 3.19
PICALM-215ENST00000531558 TNS1Q9HBL0 1735 aaKnown RBP35■■■■□ 3.19
PICALM-215ENST00000531558 TATP17735 454 aaPredicted RBP34.98■■■■□ 3.19
PICALM-215ENST00000531558 DEFB132Q7Z7B7 95 aa34.98■■■■□ 3.19
PICALM-215ENST00000531558 ZCRB1Q8TBF4 217 aaKnown RBP34.97■■■■□ 3.19
PICALM-215ENST00000531558 BAG6P46379 1132 aa34.96■■■■□ 3.19
PICALM-215ENST00000531558 IGSF1Q8N6C5 1336 aa34.96■■■■□ 3.19
PICALM-215ENST00000531558 DDX54Q8TDD1 881 aaKnown RBP34.93■■■■□ 3.18
PICALM-215ENST00000531558 SHANK3Q9BYB0 1731 aa34.92■■■■□ 3.18
PICALM-215ENST00000531558 DDX10Q13206 875 aaKnown RBP34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms