RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 SMG6Q86US8 1419 aaKnown RBP23.7■■□□□ 1.39
CTSB-222ENST00000531551 AXIN2Q9Y2T1 843 aa23.7■■□□□ 1.38
CTSB-222ENST00000531551 CCER2I3L3R5 266 aa23.68■■□□□ 1.38
CTSB-222ENST00000531551 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
CTSB-222ENST00000531551 RTL1A6NKG5 1358 aa23.68■■□□□ 1.38
CTSB-222ENST00000531551 LTN1O94822 1766 aa23.68■■□□□ 1.38
CTSB-222ENST00000531551 KIF24Q5T7B8 1368 aa23.68■■□□□ 1.38
CTSB-222ENST00000531551 CDK12Q9NYV4 1490 aaPredicted RBP23.68■■□□□ 1.38
CTSB-222ENST00000531551 PEAK1Q9H792 1746 aa23.67■■□□□ 1.38
CTSB-222ENST00000531551 LRP6O75581 1613 aa23.67■■□□□ 1.38
CTSB-222ENST00000531551 DIAPH1O60610 1272 aaKnown RBP23.66■■□□□ 1.38
CTSB-222ENST00000531551 NGLY1Q96IV0 654 aa23.66■■□□□ 1.38
CTSB-222ENST00000531551 BTG4Q9NY30 223 aa23.66■■□□□ 1.38
CTSB-222ENST00000531551 INSRP06213 1382 aa23.65■■□□□ 1.38
CTSB-222ENST00000531551 CSB-PGBD3P0DP91 1061 aa23.64■■□□□ 1.38
CTSB-222ENST00000531551 EIF4A2Q14240 407 aaKnown RBP23.64■■□□□ 1.38
CTSB-222ENST00000531551 ANKRD24Q8TF21 1146 aa23.64■■□□□ 1.38
CTSB-222ENST00000531551 U2SURPO15042 1029 aaKnown RBP23.64■■□□□ 1.37
CTSB-222ENST00000531551 EVA1CP58658 441 aa23.64■■□□□ 1.37
CTSB-222ENST00000531551 ILDR1Q86SU0 546 aaPredicted RBP23.64■■□□□ 1.37
CTSB-222ENST00000531551 STRN4Q9NRL3 753 aa23.64■■□□□ 1.37
CTSB-222ENST00000531551 BLMP54132 1417 aaPredicted RBP23.63■■□□□ 1.37
CTSB-222ENST00000531551 NUDCQ9Y266 331 aa23.62■■□□□ 1.37
CTSB-222ENST00000531551 IL13P35225 146 aa23.61■■□□□ 1.37
CTSB-222ENST00000531551 WDR43Q15061 677 aaKnown RBP eCLIP23.6■■□□□ 1.37
CTSB-222ENST00000531551 COL3A1P02461 1466 aaPredicted RBP23.6■■□□□ 1.37
CTSB-222ENST00000531551 CAMTA1Q9Y6Y1 1673 aa23.6■■□□□ 1.37
CTSB-222ENST00000531551 ERBB3P21860 1342 aa23.6■■□□□ 1.37
CTSB-222ENST00000531551 FAM9BQ8IZU0 186 aa23.59■■□□□ 1.37
CTSB-222ENST00000531551 COL14A1Q05707 1796 aaKnown RBP23.59■■□□□ 1.37
CTSB-222ENST00000531551 COL18A1P39060 1754 aa23.58■■□□□ 1.36
CTSB-222ENST00000531551 U2AF1L5P0DN76 240 aaPredicted RBP23.58■■□□□ 1.36
CTSB-222ENST00000531551 U2AF1Q01081 240 aaKnown RBP eCLIP23.58■■□□□ 1.36
CTSB-222ENST00000531551 ABCC6O95255 1503 aa23.57■■□□□ 1.36
CTSB-222ENST00000531551 NLRP2Q9NX02 1062 aa23.57■■□□□ 1.36
CTSB-222ENST00000531551 TOM1L2Q6ZVM7 507 aa23.56■■□□□ 1.36
CTSB-222ENST00000531551 PNISRQ8TF01 805 aaKnown RBP23.56■■□□□ 1.36
CTSB-222ENST00000531551 LMO7Q8WWI1 1683 aa23.56■■□□□ 1.36
CTSB-222ENST00000531551 COL5A2P05997 1499 aaPredicted RBP23.56■■□□□ 1.36
CTSB-222ENST00000531551 LARP1Q6PKG0 1096 aaKnown RBP23.56■■□□□ 1.36
CTSB-222ENST00000531551 USHBP1Q8N6Y0 703 aa23.56■■□□□ 1.36
CTSB-222ENST00000531551 EYA1Q99502 592 aa23.56■■□□□ 1.36
CTSB-222ENST00000531551 NBPF6Q5VWK0 638 aa23.55■■□□□ 1.36
CTSB-222ENST00000531551 NBPF4Q96M43 638 aa23.55■■□□□ 1.36
CTSB-222ENST00000531551 USP21Q9UK80 565 aa23.55■■□□□ 1.36
CTSB-222ENST00000531551 WDR17Q8IZU2 1322 aa23.54■■□□□ 1.36
CTSB-222ENST00000531551 HMOX1P09601 288 aa23.54■■□□□ 1.36
CTSB-222ENST00000531551 RGPD5Q99666 1765 aa23.54■■□□□ 1.36
CTSB-222ENST00000531551 AFF2P51816 1311 aa23.54■■□□□ 1.36
CTSB-222ENST00000531551 FNBP4Q8N3X1 1017 aaPredicted RBP23.53■■□□□ 1.36
CTSB-222ENST00000531551 SLIT2O94813 1529 aa23.53■■□□□ 1.36
CTSB-222ENST00000531551 UNC5CLQ8IV45 518 aa23.53■■□□□ 1.36
CTSB-222ENST00000531551 USP35Q9P2H5 1018 aa23.53■■□□□ 1.36
CTSB-222ENST00000531551 ADAMTS8Q9UP79 889 aa23.53■■□□□ 1.36
CTSB-222ENST00000531551 CCDC9Q9Y3X0 531 aaKnown RBP23.53■■□□□ 1.36
CTSB-222ENST00000531551 SULT6B1Q6IMI4 303 aa23.52■■□□□ 1.36
CTSB-222ENST00000531551 PLCH1Q4KWH8 1693 aa23.52■■□□□ 1.35
CTSB-222ENST00000531551 AEBP1Q8IUX7 1158 aa23.5■■□□□ 1.35
CTSB-222ENST00000531551 IGSF1Q8N6C5 1336 aa23.5■■□□□ 1.35
CTSB-222ENST00000531551 BCL9LQ86UU0 1499 aa23.48■■□□□ 1.35
CTSB-222ENST00000531551 CRB1P82279 1406 aa23.47■■□□□ 1.35
CTSB-222ENST00000531551 CCDC146Q8IYE0 955 aa23.47■■□□□ 1.35
CTSB-222ENST00000531551 CARD10Q9BWT7 1032 aa23.47■■□□□ 1.35
CTSB-222ENST00000531551 PRKAR2BP31323 418 aa23.45■■□□□ 1.34
CTSB-222ENST00000531551 NWD2Q9ULI1 1742 aa23.44■■□□□ 1.34
CTSB-222ENST00000531551 FCHSD2O94868 740 aa23.44■■□□□ 1.34
CTSB-222ENST00000531551 RSPH6AQ9H0K4 717 aa23.44■■□□□ 1.34
CTSB-222ENST00000531551 VPS72Q15906 364 aa23.43■■□□□ 1.34
CTSB-222ENST00000531551 NRAPQ86VF7 1730 aa23.43■■□□□ 1.34
CTSB-222ENST00000531551 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
CTSB-222ENST00000531551 RGPD2P0DJD1 1756 aa23.42■■□□□ 1.34
CTSB-222ENST00000531551 RAPGEF4Q8WZA2 1011 aa23.42■■□□□ 1.34
CTSB-222ENST00000531551 PNNQ9H307 717 aaKnown RBP23.42■■□□□ 1.34
CTSB-222ENST00000531551 TRPC5Q9UL62 973 aaPredicted RBP23.42■■□□□ 1.34
CTSB-222ENST00000531551 SPATA31A1Q5TZJ5 1347 aa23.42■■□□□ 1.34
CTSB-222ENST00000531551 SENP3-EIF4A1A0A087X0R7 540 aa23.41■■□□□ 1.34
CTSB-222ENST00000531551 NEFMP07197 916 aa23.41■■□□□ 1.34
CTSB-222ENST00000531551 QTRT2Q9H974 415 aaKnown RBP23.41■■□□□ 1.34
CTSB-222ENST00000531551 SPATA31A5Q5VU36 1347 aa23.41■■□□□ 1.34
CTSB-222ENST00000531551 SPATA31A7Q8IWB4 1347 aa23.41■■□□□ 1.34
CTSB-222ENST00000531551 RGPD1P0DJD0 1748 aa23.41■■□□□ 1.34
CTSB-222ENST00000531551 ZNF772Q68DY9 489 aaPredicted RBP23.41■■□□□ 1.34
CTSB-222ENST00000531551 TCP11L2Q8N4U5 519 aa23.41■■□□□ 1.34
CTSB-222ENST00000531551 KDRP35968 1356 aa23.4■■□□□ 1.34
CTSB-222ENST00000531551 FAM208AQ9UK61 1670 aaKnown RBP23.4■■□□□ 1.34
CTSB-222ENST00000531551 MAPK8IP3Q9UPT6 1336 aa23.39■■□□□ 1.34
CTSB-222ENST00000531551 TATP17735 454 aaPredicted RBP23.39■■□□□ 1.33
CTSB-222ENST00000531551 IL2RBP14784 551 aa23.38■■□□□ 1.33
CTSB-222ENST00000531551 RUNDC1Q96C34 613 aa23.38■■□□□ 1.33
CTSB-222ENST00000531551 GJD4Q96KN9 370 aaPredicted RBP23.37■■□□□ 1.33
CTSB-222ENST00000531551 PLEKHF1Q96S99 279 aa23.37■■□□□ 1.33
CTSB-222ENST00000531551 PHACTR3Q96KR7 559 aa23.36■■□□□ 1.33
CTSB-222ENST00000531551 THRAP3Q9Y2W1 955 aaKnown RBP23.36■■□□□ 1.33
CTSB-222ENST00000531551 NCAPD2Q15021 1401 aa23.36■■□□□ 1.33
CTSB-222ENST00000531551 FAM98CQ17RN3 349 aaKnown RBP23.36■■□□□ 1.33
CTSB-222ENST00000531551 A0A0G2JS52 829 aa23.35■■□□□ 1.33
CTSB-222ENST00000531551 ATRNO75882 1429 aa23.35■■□□□ 1.33
CTSB-222ENST00000531551 MYT1Q01538 1121 aa23.35■■□□□ 1.33
CTSB-222ENST00000531551 MEGF6O75095 1541 aa23.34■■□□□ 1.33
CTSB-222ENST00000531551 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms