RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CDCA7Q9BWT1 371 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-206ENST00000531430 WDR17Q8IZU2 1322 aa13.29□□□□□ -0.28
NEDD8-206ENST00000531430 SLC15A2Q16348 729 aa13.28□□□□□ -0.28
NEDD8-206ENST00000531430 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
NEDD8-206ENST00000531430 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
NEDD8-206ENST00000531430 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.29
NEDD8-206ENST00000531430 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
NEDD8-206ENST00000531430 SYT17Q9BSW7 474 aa13.27□□□□□ -0.29
NEDD8-206ENST00000531430 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
NEDD8-206ENST00000531430 CARD10Q9BWT7 1032 aa13.27□□□□□ -0.29
NEDD8-206ENST00000531430 EVC2Q86UK5 1308 aa13.27□□□□□ -0.29
NEDD8-206ENST00000531430 LMO7Q8WWI1 1683 aa13.27□□□□□ -0.29
NEDD8-206ENST00000531430 USP6P35125 1406 aa13.26□□□□□ -0.29
NEDD8-206ENST00000531430 TTC21BQ7Z4L5 1316 aa13.26□□□□□ -0.29
NEDD8-206ENST00000531430 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-206ENST00000531430 PARP4Q9UKK3 1724 aaKnown RBP13.25□□□□□ -0.29
NEDD8-206ENST00000531430 TOPAZ1Q8N9V7 1692 aa13.25□□□□□ -0.29
NEDD8-206ENST00000531430 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
NEDD8-206ENST00000531430 PTGER2P43116 358 aa13.25□□□□□ -0.29
NEDD8-206ENST00000531430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.25□□□□□ -0.29
NEDD8-206ENST00000531430 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
NEDD8-206ENST00000531430 KAT6BQ8WYB5 2073 aa13.25□□□□□ -0.29
NEDD8-206ENST00000531430 NEUROD1Q13562 356 aa13.24□□□□□ -0.29
NEDD8-206ENST00000531430 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
NEDD8-206ENST00000531430 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
NEDD8-206ENST00000531430 GPR162Q16538 588 aa13.23□□□□□ -0.29
NEDD8-206ENST00000531430 L3MBTL2Q969R5 705 aa13.23□□□□□ -0.29
NEDD8-206ENST00000531430 ARXQ96QS3 562 aa13.23□□□□□ -0.29
NEDD8-206ENST00000531430 MTFR1LQ9H019 292 aa13.23□□□□□ -0.29
NEDD8-206ENST00000531430 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
NEDD8-206ENST00000531430 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
NEDD8-206ENST00000531430 SIN3AQ96ST3 1273 aa13.21□□□□□ -0.29
NEDD8-206ENST00000531430 KTN1Q86UP2 1357 aaKnown RBP13.2□□□□□ -0.3
NEDD8-206ENST00000531430 PEAK1Q9H792 1746 aa13.2□□□□□ -0.3
NEDD8-206ENST00000531430 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
NEDD8-206ENST00000531430 CPSF1Q10570 1443 aaKnown RBP13.2□□□□□ -0.3
NEDD8-206ENST00000531430 LRRC37A3O60309 1634 aa13.2□□□□□ -0.3
NEDD8-206ENST00000531430 KIAA1210Q9ULL0 1709 aa13.19□□□□□ -0.3
NEDD8-206ENST00000531430 TTC21AQ8NDW8 1320 aa13.19□□□□□ -0.3
NEDD8-206ENST00000531430 IL2RBP14784 551 aa13.19□□□□□ -0.3
NEDD8-206ENST00000531430 LTV1Q96GA3 475 aaPredicted RBP13.19□□□□□ -0.3
NEDD8-206ENST00000531430 RGPD5Q99666 1765 aa13.19□□□□□ -0.3
NEDD8-206ENST00000531430 CCDC7Q96M83 1385 aa13.19□□□□□ -0.3
NEDD8-206ENST00000531430 SLIT3O75094 1523 aa13.18□□□□□ -0.3
NEDD8-206ENST00000531430 SYTL4Q96C24 671 aaPredicted RBP13.18□□□□□ -0.3
NEDD8-206ENST00000531430 MYOM1P52179 1685 aa13.18□□□□□ -0.3
NEDD8-206ENST00000531430 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
NEDD8-206ENST00000531430 COL18A1P39060 1754 aa13.17□□□□□ -0.3
NEDD8-206ENST00000531430 MSH5O43196 834 aa13.17□□□□□ -0.3
NEDD8-206ENST00000531430 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
NEDD8-206ENST00000531430 NME9Q86XW9 330 aa13.17□□□□□ -0.3
NEDD8-206ENST00000531430 ANKRD24Q8TF21 1146 aa13.17□□□□□ -0.3
NEDD8-206ENST00000531430 ROCK2O75116 1388 aaKnown RBP13.17□□□□□ -0.3
NEDD8-206ENST00000531430 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
NEDD8-206ENST00000531430 POLD1P28340 1107 aa13.16□□□□□ -0.3
NEDD8-206ENST00000531430 KCNQ4P56696 695 aa13.16□□□□□ -0.3
NEDD8-206ENST00000531430 ZNF827Q17R98 1081 aa13.16□□□□□ -0.3
NEDD8-206ENST00000531430 CASZ1Q86V15 1759 aa13.16□□□□□ -0.3
NEDD8-206ENST00000531430 PIK3C2AO00443 1686 aa13.15□□□□□ -0.3
NEDD8-206ENST00000531430 HDGFL2Q7Z4V5 671 aaPredicted RBP13.15□□□□□ -0.3
NEDD8-206ENST00000531430 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.3
NEDD8-206ENST00000531430 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
NEDD8-206ENST00000531430 TFCP2L1Q9NZI6 479 aa13.15□□□□□ -0.3
NEDD8-206ENST00000531430 BCL9O00512 1426 aa13.14□□□□□ -0.31
NEDD8-206ENST00000531430 RGPD3A6NKT7 1758 aaPredicted RBP13.14□□□□□ -0.31
NEDD8-206ENST00000531430 RGPD4Q7Z3J3 1758 aa13.14□□□□□ -0.31
NEDD8-206ENST00000531430 SLC12A5Q9H2X9 1139 aa13.13□□□□□ -0.31
NEDD8-206ENST00000531430 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
NEDD8-206ENST00000531430 PRIM1P49642 420 aaKnown RBP13.12□□□□□ -0.31
NEDD8-206ENST00000531430 TNS2Q63HR2 1409 aa13.12□□□□□ -0.31
NEDD8-206ENST00000531430 ERBB3P21860 1342 aa13.12□□□□□ -0.31
NEDD8-206ENST00000531430 CHD4Q14839 1912 aa13.11□□□□□ -0.31
NEDD8-206ENST00000531430 SLC16A10Q8TF71 515 aa13.11□□□□□ -0.31
NEDD8-206ENST00000531430 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
NEDD8-206ENST00000531430 CARD11Q9BXL7 1154 aa13.1□□□□□ -0.31
NEDD8-206ENST00000531430 UTRNP46939 3433 aa13.1□□□□□ -0.31
NEDD8-206ENST00000531430 WNK3Q9BYP7 1800 aa13.1□□□□□ -0.31
NEDD8-206ENST00000531430 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
NEDD8-206ENST00000531430 SLC27A3Q5K4L6 730 aa13.09□□□□□ -0.31
NEDD8-206ENST00000531430 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
NEDD8-206ENST00000531430 TERF2IPQ9NYB0 399 aa13.09□□□□□ -0.31
NEDD8-206ENST00000531430 FBLN1P23142 703 aa13.08□□□□□ -0.32
NEDD8-206ENST00000531430 AMPHP49418 695 aa13.08□□□□□ -0.32
NEDD8-206ENST00000531430 IP6K1Q92551 441 aa13.08□□□□□ -0.32
NEDD8-206ENST00000531430 NFAT5O94916 1531 aa13.08□□□□□ -0.32
NEDD8-206ENST00000531430 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
NEDD8-206ENST00000531430 MSL1Q68DK7 614 aa13.07□□□□□ -0.32
NEDD8-206ENST00000531430 ZCRB1Q8TBF4 217 aaKnown RBP13.07□□□□□ -0.32
NEDD8-206ENST00000531430 CCNL1Q9UK58 526 aaPredicted RBP13.07□□□□□ -0.32
NEDD8-206ENST00000531430 PNPLA7Q6ZV29 1317 aa13.07□□□□□ -0.32
NEDD8-206ENST00000531430 COG3Q96JB2 828 aa13.06□□□□□ -0.32
NEDD8-206ENST00000531430 BTAF1O14981 1849 aa13.06□□□□□ -0.32
NEDD8-206ENST00000531430 NHSQ6T4R5 1651 aa13.05□□□□□ -0.32
NEDD8-206ENST00000531430 GRIN3BO60391 1043 aa13.05□□□□□ -0.32
NEDD8-206ENST00000531430 SBNO2Q9Y2G9 1366 aa13.05□□□□□ -0.32
NEDD8-206ENST00000531430 COL23A1Q86Y22 540 aaPredicted RBP13.04□□□□□ -0.32
NEDD8-206ENST00000531430 MAP3K5Q99683 1374 aa13.04□□□□□ -0.32
NEDD8-206ENST00000531430 YBX3P16989 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
NEDD8-206ENST00000531430 USHBP1Q8N6Y0 703 aa13.03□□□□□ -0.32
NEDD8-206ENST00000531430 ZNF526Q8TF50 670 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms