RNA–Protein interactions for RNA: ENST00000531184.5

GSDMD-211, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,213 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-211ENST00000531184 RAB3GAP1Q15042 981 aa25.83■■□□□ 1.72
GSDMD-211ENST00000531184 ZKSCAN5Q9Y2L8 839 aa25.83■■□□□ 1.72
GSDMD-211ENST00000531184 NKTRP30414 1462 aaKnown RBP25.82■■□□□ 1.72
GSDMD-211ENST00000531184 ADGRB1O14514 1584 aa25.82■■□□□ 1.72
GSDMD-211ENST00000531184 LAMC1P11047 1609 aa25.82■■□□□ 1.72
GSDMD-211ENST00000531184 STRCP1A6NGW2 1772 aa25.81■■□□□ 1.72
GSDMD-211ENST00000531184 TRPM1Q7Z4N2 1603 aa25.81■■□□□ 1.72
GSDMD-211ENST00000531184 SMC5Q8IY18 1101 aa25.8■■□□□ 1.72
GSDMD-211ENST00000531184 CHD2O14647 1828 aaKnown RBP25.8■■□□□ 1.72
GSDMD-211ENST00000531184 YTHDC2Q9H6S0 1430 aaKnown RBP25.8■■□□□ 1.72
GSDMD-211ENST00000531184 TRAK1Q9UPV9 953 aa25.8■■□□□ 1.72
GSDMD-211ENST00000531184 ADAMTS8Q9UP79 889 aa25.79■■□□□ 1.72
GSDMD-211ENST00000531184 PMFBP1Q8TBY8 1022 aa25.79■■□□□ 1.72
GSDMD-211ENST00000531184 KIAA1210Q9ULL0 1709 aa25.77■■□□□ 1.72
GSDMD-211ENST00000531184 SNX21Q969T3 373 aa25.76■■□□□ 1.71
GSDMD-211ENST00000531184 ZNF445P59923 1031 aa25.76■■□□□ 1.71
GSDMD-211ENST00000531184 KLHL40Q2TBA0 621 aa25.76■■□□□ 1.71
GSDMD-211ENST00000531184 PROSER2Q86WR7 435 aaPredicted RBP25.75■■□□□ 1.71
GSDMD-211ENST00000531184 ROBO2Q9HCK4 1378 aa25.75■■□□□ 1.71
GSDMD-211ENST00000531184 WAPLQ7Z5K2 1190 aa25.75■■□□□ 1.71
GSDMD-211ENST00000531184 MYRIPQ8NFW9 859 aa25.75■■□□□ 1.71
GSDMD-211ENST00000531184 ABCC11Q96J66 1382 aa25.74■■□□□ 1.71
GSDMD-211ENST00000531184 BCAR3O75815 825 aa25.74■■□□□ 1.71
GSDMD-211ENST00000531184 LTBP4Q8N2S1 1624 aa25.74■■□□□ 1.71
GSDMD-211ENST00000531184 NWD1Q149M9 1564 aa25.74■■□□□ 1.71
GSDMD-211ENST00000531184 XRN1Q8IZH2 1706 aaKnown RBP25.73■■□□□ 1.71
GSDMD-211ENST00000531184 SAFB2Q14151 953 aaKnown RBP eCLIP25.72■■□□□ 1.71
GSDMD-211ENST00000531184 ZNF830Q96NB3 372 aaPredicted RBP25.72■■□□□ 1.71
GSDMD-211ENST00000531184 GPRASP1Q5JY77 1395 aa25.71■■□□□ 1.71
GSDMD-211ENST00000531184 RBM25P49756 843 aaKnown RBP25.71■■□□□ 1.71
GSDMD-211ENST00000531184 CLEC17AQ6ZS10 378 aa25.71■■□□□ 1.71
GSDMD-211ENST00000531184 PDZRN3Q9UPQ7 1066 aa25.71■■□□□ 1.71
GSDMD-211ENST00000531184 GOLGA6L22H0YM25 854 aa25.71■■□□□ 1.71
GSDMD-211ENST00000531184 CBX1P83916 185 aa25.71■■□□□ 1.71
GSDMD-211ENST00000531184 CC2D1BQ5T0F9 858 aaKnown RBP25.7■■□□□ 1.7
GSDMD-211ENST00000531184 PRAM1Q96QH2 718 aa25.69■■□□□ 1.7
GSDMD-211ENST00000531184 PANK3Q9H999 370 aa25.69■■□□□ 1.7
GSDMD-211ENST00000531184 TMEM94Q12767 1356 aa25.69■■□□□ 1.7
GSDMD-211ENST00000531184 LRRC7Q96NW7 1537 aa25.69■■□□□ 1.7
GSDMD-211ENST00000531184 TECPR2O15040 1411 aa25.69■■□□□ 1.7
GSDMD-211ENST00000531184 HSP90AB1P08238 724 aaKnown RBP25.68■■□□□ 1.7
GSDMD-211ENST00000531184 GTF2F1P35269 517 aaKnown RBP eCLIP25.68■■□□□ 1.7
GSDMD-211ENST00000531184 CCDC39Q9UFE4 941 aa25.68■■□□□ 1.7
GSDMD-211ENST00000531184 MFAP1P55081 439 aaKnown RBP25.67■■□□□ 1.7
GSDMD-211ENST00000531184 ZNF710Q8N1W2 664 aa25.67■■□□□ 1.7
GSDMD-211ENST00000531184 CPS1P31327 1500 aa25.67■■□□□ 1.7
GSDMD-211ENST00000531184 PTCH1Q13635 1447 aa25.67■■□□□ 1.7
GSDMD-211ENST00000531184 WDR43Q15061 677 aaKnown RBP eCLIP25.67■■□□□ 1.7
GSDMD-211ENST00000531184 PRIMPOLQ96LW4 560 aa25.67■■□□□ 1.7
GSDMD-211ENST00000531184 C14orf37Q86TY3 774 aa25.64■■□□□ 1.7
GSDMD-211ENST00000531184 COG6Q9Y2V7 657 aa25.64■■□□□ 1.7
GSDMD-211ENST00000531184 DDX49Q9Y6V7 483 aaKnown RBP25.64■■□□□ 1.7
GSDMD-211ENST00000531184 ATP2B3Q16720 1220 aa25.64■■□□□ 1.69
GSDMD-211ENST00000531184 HMGN5P82970 282 aaKnown RBP25.63■■□□□ 1.69
GSDMD-211ENST00000531184 KNDC1Q76NI1 1749 aa25.63■■□□□ 1.69
GSDMD-211ENST00000531184 VGLL3A8MV65 326 aa25.63■■□□□ 1.69
GSDMD-211ENST00000531184 E9PSI1 815 aa25.63■■□□□ 1.69
GSDMD-211ENST00000531184 SIRT1Q96EB6 747 aa25.63■■□□□ 1.69
GSDMD-211ENST00000531184 FTSJ3Q8IY81 847 aaKnown RBP25.62■■□□□ 1.69
GSDMD-211ENST00000531184 FAM135BQ49AJ0 1406 aa25.62■■□□□ 1.69
GSDMD-211ENST00000531184 DLC1Q96QB1 1528 aa25.61■■□□□ 1.69
GSDMD-211ENST00000531184 ARHGEF28Q8N1W1 1705 aaKnown RBP25.6■■□□□ 1.69
GSDMD-211ENST00000531184 CDK11BP21127 795 aaKnown RBP25.6■■□□□ 1.69
GSDMD-211ENST00000531184 PAXIP1Q6ZW49 1069 aaPredicted RBP25.6■■□□□ 1.69
GSDMD-211ENST00000531184 CERKQ8TCT0 537 aa25.6■■□□□ 1.69
GSDMD-211ENST00000531184 PANK1Q8TE04 598 aa25.6■■□□□ 1.69
GSDMD-211ENST00000531184 RBSNQ9H1K0 784 aa25.6■■□□□ 1.69
GSDMD-211ENST00000531184 RWDD1Q9H446 243 aaPredicted RBP25.59■■□□□ 1.69
GSDMD-211ENST00000531184 PCDHB15Q9Y5E8 787 aa25.59■■□□□ 1.69
GSDMD-211ENST00000531184 XIRP1Q702N8 1843 aaKnown RBP25.59■■□□□ 1.69
GSDMD-211ENST00000531184 MINK1Q8N4C8 1332 aaPredicted RBP25.59■■□□□ 1.69
GSDMD-211ENST00000531184 SPINK5Q9NQ38 1064 aaPredicted RBP25.58■■□□□ 1.69
GSDMD-211ENST00000531184 KIAA2012Q0VF49 1180 aa25.57■■□□□ 1.68
GSDMD-211ENST00000531184 ZSCAN23Q3MJ62 389 aa25.57■■□□□ 1.68
GSDMD-211ENST00000531184 SLC20A2Q08357 652 aa25.56■■□□□ 1.68
GSDMD-211ENST00000531184 CGNQ9P2M7 1197 aaKnown RBP25.56■■□□□ 1.68
GSDMD-211ENST00000531184 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.55■■□□□ 1.68
GSDMD-211ENST00000531184 C19orf44Q9H6X5 657 aa25.55■■□□□ 1.68
GSDMD-211ENST00000531184 BAG4O95429 457 aaKnown RBP25.54■■□□□ 1.68
GSDMD-211ENST00000531184 PLCD3Q8N3E9 789 aa25.53■■□□□ 1.68
GSDMD-211ENST00000531184 DNTTIP2Q5QJE6 756 aaKnown RBP25.53■■□□□ 1.68
GSDMD-211ENST00000531184 ADGRL3Q9HAR2 1447 aa25.53■■□□□ 1.68
GSDMD-211ENST00000531184 MSH6P52701 1360 aa25.52■■□□□ 1.68
GSDMD-211ENST00000531184 SSFA2P28290 1259 aa25.52■■□□□ 1.68
GSDMD-211ENST00000531184 NGEFQ8N5V2 710 aa25.52■■□□□ 1.68
GSDMD-211ENST00000531184 NALCNQ8IZF0 1738 aa25.51■■□□□ 1.68
GSDMD-211ENST00000531184 PPP2R1AP30153 589 aa25.51■■□□□ 1.67
GSDMD-211ENST00000531184 KIF3AQ9Y496 699 aa25.51■■□□□ 1.67
GSDMD-211ENST00000531184 NUTM2FA1L443 756 aa25.5■■□□□ 1.67
GSDMD-211ENST00000531184 CAVIN1Q6NZI2 390 aaKnown RBP25.49■■□□□ 1.67
GSDMD-211ENST00000531184 PRIM1P49642 420 aaKnown RBP25.49■■□□□ 1.67
GSDMD-211ENST00000531184 ATF3P18847 181 aa25.48■■□□□ 1.67
GSDMD-211ENST00000531184 PDCL2Q8N4E4 241 aa25.48■■□□□ 1.67
GSDMD-211ENST00000531184 TESK2Q96S53 571 aa25.48■■□□□ 1.67
GSDMD-211ENST00000531184 QRICH2Q9H0J4 1663 aa25.47■■□□□ 1.67
GSDMD-211ENST00000531184 IRX5P78411 483 aaPredicted RBP25.47■■□□□ 1.67
GSDMD-211ENST00000531184 DISP3Q9P2K9 1392 aa25.46■■□□□ 1.67
GSDMD-211ENST00000531184 TSC1Q92574 1164 aa25.46■■□□□ 1.67
GSDMD-211ENST00000531184 JARID2Q92833 1246 aaPredicted RBP25.46■■□□□ 1.67
GSDMD-211ENST00000531184 K7ELQ4 463 aaPredicted RBP25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms