RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 LRP6O75581 1613 aa7.05□□□□□ -1.28
CTNND1-226ENST00000530720 XRN1Q8IZH2 1706 aaKnown RBP7.04□□□□□ -1.28
CTNND1-226ENST00000530720 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-226ENST00000530720 DIP2AQ14689 1571 aa7.04□□□□□ -1.28
CTNND1-226ENST00000530720 PTPRUQ92729 1446 aa7.04□□□□□ -1.28
CTNND1-226ENST00000530720 SOWAHBA6NEL2 793 aa7.04□□□□□ -1.28
CTNND1-226ENST00000530720 BCAMP50895 628 aa7.04□□□□□ -1.28
CTNND1-226ENST00000530720 FAM50AQ14320 339 aaKnown RBP7.04□□□□□ -1.28
CTNND1-226ENST00000530720 PROSER2Q86WR7 435 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-226ENST00000530720 ZFRQ96KR1 1074 aaKnown RBP7.04□□□□□ -1.28
CTNND1-226ENST00000530720 AHDC1Q5TGY3 1603 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-226ENST00000530720 TRIM6-TRIM34B2RNG4 842 aa7.03□□□□□ -1.28
CTNND1-226ENST00000530720 DDX12PQ92771 950 aa7.03□□□□□ -1.28
CTNND1-226ENST00000530720 MSH6P52701 1360 aa7.03□□□□□ -1.28
CTNND1-226ENST00000530720 SETBP1Q9Y6X0 1596 aa7.03□□□□□ -1.28
CTNND1-226ENST00000530720 NCOA3Q9Y6Q9 1424 aa7.02□□□□□ -1.29
CTNND1-226ENST00000530720 SPHKAPQ2M3C7 1700 aa7.02□□□□□ -1.29
CTNND1-226ENST00000530720 ITGBL1O95965 494 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-226ENST00000530720 NYAP1Q6ZVC0 841 aa7.02□□□□□ -1.29
CTNND1-226ENST00000530720 SLAIN2Q9P270 581 aa7.02□□□□□ -1.29
CTNND1-226ENST00000530720 TBX22Q9Y458 520 aa7.02□□□□□ -1.29
CTNND1-226ENST00000530720 SHPRHQ149N8 1683 aa7.02□□□□□ -1.29
CTNND1-226ENST00000530720 TRPM2O94759 1503 aa7.01□□□□□ -1.29
CTNND1-226ENST00000530720 PIK3R4Q99570 1358 aa7.01□□□□□ -1.29
CTNND1-226ENST00000530720 JCADQ9P266 1359 aa7.01□□□□□ -1.29
CTNND1-226ENST00000530720 PDIA6Q15084 440 aa7.01□□□□□ -1.29
CTNND1-226ENST00000530720 SEPT9Q9UHD8 586 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-226ENST00000530720 CLTCL1P53675 1640 aa7.01□□□□□ -1.29
CTNND1-226ENST00000530720 NHSL1Q5SYE7 1610 aa7.01□□□□□ -1.29
CTNND1-226ENST00000530720 EN1Q05925 392 aaPredicted RBP7□□□□□ -1.29
CTNND1-226ENST00000530720 FAM98CQ17RN3 349 aaKnown RBP7□□□□□ -1.29
CTNND1-226ENST00000530720 NUTM2DQ5VT03 806 aaPredicted RBP7□□□□□ -1.29
CTNND1-226ENST00000530720 SPRYD3Q8NCJ5 442 aa7□□□□□ -1.29
CTNND1-226ENST00000530720 NALCNQ8IZF0 1738 aa7□□□□□ -1.29
CTNND1-226ENST00000530720 NEXMIFQ5QGS0 1516 aa7□□□□□ -1.29
CTNND1-226ENST00000530720 NUP155O75694 1391 aa6.99□□□□□ -1.29
CTNND1-226ENST00000530720 SPDYE16A6NNV3 312 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-226ENST00000530720 NBR1Q14596 966 aa6.99□□□□□ -1.29
CTNND1-226ENST00000530720 WBP1LQ9NX94 342 aa6.99□□□□□ -1.29
CTNND1-226ENST00000530720 ASXL1Q8IXJ9 1541 aa6.99□□□□□ -1.29
CTNND1-226ENST00000530720 MST1RQ04912 1400 aa6.99□□□□□ -1.29
CTNND1-226ENST00000530720 METP08581 1390 aa6.98□□□□□ -1.29
CTNND1-226ENST00000530720 MAP3K7O43318 606 aa6.98□□□□□ -1.29
CTNND1-226ENST00000530720 PPP1R15AO75807 674 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-226ENST00000530720 TSR1Q2NL82 804 aaKnown RBP6.98□□□□□ -1.29
CTNND1-226ENST00000530720 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.98□□□□□ -1.29
CTNND1-226ENST00000530720 TSKSQ9UJT2 592 aa6.98□□□□□ -1.29
CTNND1-226ENST00000530720 DCCP43146 1447 aa6.98□□□□□ -1.29
CTNND1-226ENST00000530720 LAMC1P11047 1609 aa6.98□□□□□ -1.29
CTNND1-226ENST00000530720 BRINP3Q76B58 766 aa6.97□□□□□ -1.29
CTNND1-226ENST00000530720 BCANQ96GW7 911 aa6.97□□□□□ -1.29
CTNND1-226ENST00000530720 IRX2Q9BZI1 471 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-226ENST00000530720 C19orf44Q9H6X5 657 aa6.97□□□□□ -1.29
CTNND1-226ENST00000530720 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-226ENST00000530720 TSR3Q9UJK0 312 aaKnown RBP6.97□□□□□ -1.29
CTNND1-226ENST00000530720 AMOTL2Q9Y2J4 779 aa6.97□□□□□ -1.29
CTNND1-226ENST00000530720 SPATA31A6Q5VVP1 1343 aa6.97□□□□□ -1.29
CTNND1-226ENST00000530720 NAIPQ13075 1403 aa6.96□□□□□ -1.3
CTNND1-226ENST00000530720 PRAG1Q86YV5 1406 aa6.96□□□□□ -1.3
CTNND1-226ENST00000530720 SETD5Q9C0A6 1442 aa6.96□□□□□ -1.3
CTNND1-226ENST00000530720 RRBP1Q9P2E9 1410 aaKnown RBP6.96□□□□□ -1.3
CTNND1-226ENST00000530720 HDGFP51858 240 aaKnown RBP6.96□□□□□ -1.3
CTNND1-226ENST00000530720 E2F4Q16254 413 aa6.96□□□□□ -1.3
CTNND1-226ENST00000530720 PACS2Q86VP3 889 aa6.96□□□□□ -1.3
CTNND1-226ENST00000530720 LRCH3Q96II8 777 aa6.96□□□□□ -1.3
CTNND1-226ENST00000530720 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-226ENST00000530720 ARIH1Q9Y4X5 557 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-226ENST00000530720 ADGRL3Q9HAR2 1447 aa6.95□□□□□ -1.3
CTNND1-226ENST00000530720 KCNC4Q03721 635 aa6.95□□□□□ -1.3
CTNND1-226ENST00000530720 HPS5Q9UPZ3 1129 aa6.95□□□□□ -1.3
CTNND1-226ENST00000530720 ITGAEP38570 1179 aa6.94□□□□□ -1.3
CTNND1-226ENST00000530720 PPARGC1BQ86YN6 1023 aaKnown RBP6.94□□□□□ -1.3
CTNND1-226ENST00000530720 PPLO60437 1756 aa6.94□□□□□ -1.3
CTNND1-226ENST00000530720 KIF1BO60333 1816 aa6.94□□□□□ -1.3
CTNND1-226ENST00000530720 PTCH1Q13635 1447 aa6.93□□□□□ -1.3
CTNND1-226ENST00000530720 CDK12Q9NYV4 1490 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-226ENST00000530720 ATF3P18847 181 aa6.93□□□□□ -1.3
CTNND1-226ENST00000530720 PRSS12P56730 875 aa6.93□□□□□ -1.3
CTNND1-226ENST00000530720 C14orf37Q86TY3 774 aa6.93□□□□□ -1.3
CTNND1-226ENST00000530720 CDCA7LQ96GN5 454 aa6.93□□□□□ -1.3
CTNND1-226ENST00000530720 PNPLA6Q8IY17 1366 aa6.93□□□□□ -1.3
CTNND1-226ENST00000530720 ROBO2Q9HCK4 1378 aa6.93□□□□□ -1.3
CTNND1-226ENST00000530720 PRIM1P49642 420 aaKnown RBP6.92□□□□□ -1.3
CTNND1-226ENST00000530720 DDX17Q92841 729 aaKnown RBP6.92□□□□□ -1.3
CTNND1-226ENST00000530720 WDR70Q9NW82 654 aa6.92□□□□□ -1.3
CTNND1-226ENST00000530720 FAM198AQ9UFP1 575 aa6.92□□□□□ -1.3
CTNND1-226ENST00000530720 HFM1A2PYH4 1435 aa6.92□□□□□ -1.3
CTNND1-226ENST00000530720 RGS12O14924 1447 aa6.92□□□□□ -1.3
CTNND1-226ENST00000530720 C1orf167Q5SNV9 1468 aa6.92□□□□□ -1.3
CTNND1-226ENST00000530720 COL22A1Q8NFW1 1626 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-226ENST00000530720 IFT172Q9UG01 1749 aa6.91□□□□□ -1.3
CTNND1-226ENST00000530720 GRXCR2A6NFK2 248 aa6.91□□□□□ -1.3
CTNND1-226ENST00000530720 PPP4CP60510 307 aa6.91□□□□□ -1.3
CTNND1-226ENST00000530720 PAXIP1Q6ZW49 1069 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-226ENST00000530720 CFAP44Q96MT7 982 aa6.91□□□□□ -1.3
CTNND1-226ENST00000530720 SMAPO00193 183 aa6.9□□□□□ -1.3
CTNND1-226ENST00000530720 ZNF772Q68DY9 489 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-226ENST00000530720 SAMD7Q7Z3H4 446 aa6.9□□□□□ -1.3
CTNND1-226ENST00000530720 TRIM52Q96A61 297 aa6.9□□□□□ -1.3
CTNND1-226ENST00000530720 RTN4Q9NQC3 1192 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms