RNA–Protein interactions for RNA: ENST00000530683.5

SIGIRR-219, Transcript of single Ig and TIR domain containing, humanhuman

TSL 3

Gene SIGIRR, Length 630 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGIRR-219ENST00000530683 LARP1Q6PKG0 1096 aaKnown RBP20.25■□□□□ 0.83
SIGIRR-219ENST00000530683 LMO7Q8WWI1 1683 aa20.24■□□□□ 0.83
SIGIRR-219ENST00000530683 RGS12O14924 1447 aa20.24■□□□□ 0.83
SIGIRR-219ENST00000530683 ONECUT3O60422 494 aaPredicted RBP20.23■□□□□ 0.83
SIGIRR-219ENST00000530683 GLI3P10071 1580 aa20.23■□□□□ 0.83
SIGIRR-219ENST00000530683 KNSTRNQ9Y448 316 aa20.23■□□□□ 0.83
SIGIRR-219ENST00000530683 COL5A2P05997 1499 aaPredicted RBP20.23■□□□□ 0.83
SIGIRR-219ENST00000530683 SPATA31A1Q5TZJ5 1347 aa20.23■□□□□ 0.83
SIGIRR-219ENST00000530683 FAM98CQ17RN3 349 aaKnown RBP20.21■□□□□ 0.83
SIGIRR-219ENST00000530683 SEPT12Q8IYM1 358 aa20.21■□□□□ 0.83
SIGIRR-219ENST00000530683 USP35Q9P2H5 1018 aa20.21■□□□□ 0.83
SIGIRR-219ENST00000530683 MAP3K19Q56UN5 1328 aa20.21■□□□□ 0.83
SIGIRR-219ENST00000530683 COL18A1P39060 1754 aa20.21■□□□□ 0.83
SIGIRR-219ENST00000530683 RRS1Q15050 365 aaKnown RBP20.2■□□□□ 0.82
SIGIRR-219ENST00000530683 IP6K1Q92551 441 aa20.2■□□□□ 0.82
SIGIRR-219ENST00000530683 CSB-PGBD3P0DP91 1061 aa20.19■□□□□ 0.82
SIGIRR-219ENST00000530683 AMPHP49418 695 aa20.19■□□□□ 0.82
SIGIRR-219ENST00000530683 TOM1L2Q6ZVM7 507 aa20.19■□□□□ 0.82
SIGIRR-219ENST00000530683 WDR17Q8IZU2 1322 aa20.19■□□□□ 0.82
SIGIRR-219ENST00000530683 PER1O15534 1290 aaPredicted RBP20.18■□□□□ 0.82
SIGIRR-219ENST00000530683 TCP11L2Q8N4U5 519 aa20.18■□□□□ 0.82
SIGIRR-219ENST00000530683 ABCC6O95255 1503 aa20.17■□□□□ 0.82
SIGIRR-219ENST00000530683 A0A0G2JS52 829 aa20.17■□□□□ 0.82
SIGIRR-219ENST00000530683 MYT1Q01538 1121 aa20.17■□□□□ 0.82
SIGIRR-219ENST00000530683 KIF20BQ96Q89 1820 aa20.17■□□□□ 0.82
SIGIRR-219ENST00000530683 CRB1P82279 1406 aa20.17■□□□□ 0.82
SIGIRR-219ENST00000530683 HOXC9P31274 260 aa20.16■□□□□ 0.82
SIGIRR-219ENST00000530683 AMER1Q5JTC6 1135 aaPredicted RBP20.16■□□□□ 0.82
SIGIRR-219ENST00000530683 BARGINQ6ZT62 677 aa20.16■□□□□ 0.82
SIGIRR-219ENST00000530683 ANKRD24Q8TF21 1146 aa20.16■□□□□ 0.82
SIGIRR-219ENST00000530683 THRAP3Q9Y2W1 955 aaKnown RBP20.16■□□□□ 0.82
SIGIRR-219ENST00000530683 NSD2O96028 1365 aa20.16■□□□□ 0.82
SIGIRR-219ENST00000530683 ERBB3P21860 1342 aa20.15■□□□□ 0.82
SIGIRR-219ENST00000530683 BLMP54132 1417 aaPredicted RBP20.14■□□□□ 0.81
SIGIRR-219ENST00000530683 MORC1Q86VD1 984 aa20.14■□□□□ 0.81
SIGIRR-219ENST00000530683 CARD10Q9BWT7 1032 aa20.14■□□□□ 0.81
SIGIRR-219ENST00000530683 RTL1A6NKG5 1358 aa20.13■□□□□ 0.81
SIGIRR-219ENST00000530683 TNNT2P45379 298 aaPredicted RBP20.13■□□□□ 0.81
SIGIRR-219ENST00000530683 LTV1Q96GA3 475 aaPredicted RBP20.13■□□□□ 0.81
SIGIRR-219ENST00000530683 EMILIN1Q9Y6C2 1016 aa20.13■□□□□ 0.81
SIGIRR-219ENST00000530683 NLRP2Q9NX02 1062 aa20.12■□□□□ 0.81
SIGIRR-219ENST00000530683 LTN1O94822 1766 aa20.12■□□□□ 0.81
SIGIRR-219ENST00000530683 KRT27Q7Z3Y8 459 aa20.11■□□□□ 0.81
SIGIRR-219ENST00000530683 POLKQ9UBT6 870 aa20.11■□□□□ 0.81
SIGIRR-219ENST00000530683 KIF24Q5T7B8 1368 aa20.1■□□□□ 0.81
SIGIRR-219ENST00000530683 PPM1GO15355 546 aaPredicted RBP20.1■□□□□ 0.81
SIGIRR-219ENST00000530683 HSP90AB2PQ58FF8 381 aa20.1■□□□□ 0.81
SIGIRR-219ENST00000530683 RGPD5Q99666 1765 aa20.1■□□□□ 0.81
SIGIRR-219ENST00000530683 FLT4P35916 1363 aa20.09■□□□□ 0.81
SIGIRR-219ENST00000530683 CC2D1BQ5T0F9 858 aaKnown RBP20.08■□□□□ 0.81
SIGIRR-219ENST00000530683 INSRP06213 1382 aa20.08■□□□□ 0.8
SIGIRR-219ENST00000530683 UPF1Q92900 1129 aaKnown RBP eCLIP20.07■□□□□ 0.8
SIGIRR-219ENST00000530683 CDCA7Q9BWT1 371 aaPredicted RBP20.07■□□□□ 0.8
SIGIRR-219ENST00000530683 THSD7AQ9UPZ6 1657 aa20.06■□□□□ 0.8
SIGIRR-219ENST00000530683 NPC1L1Q9UHC9 1359 aa20.06■□□□□ 0.8
SIGIRR-219ENST00000530683 PDE3BQ13370 1112 aa20.05■□□□□ 0.8
SIGIRR-219ENST00000530683 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
SIGIRR-219ENST00000530683 CNGB1Q14028 1251 aaPredicted RBP20.04■□□□□ 0.8
SIGIRR-219ENST00000530683 PEAK1Q9H792 1746 aa20.03■□□□□ 0.8
SIGIRR-219ENST00000530683 NBPF6Q5VWK0 638 aa20.03■□□□□ 0.8
SIGIRR-219ENST00000530683 NBPF4Q96M43 638 aa20.03■□□□□ 0.8
SIGIRR-219ENST00000530683 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.8
SIGIRR-219ENST00000530683 IL2RBP14784 551 aa20.02■□□□□ 0.8
SIGIRR-219ENST00000530683 DDB1Q16531 1140 aa20.02■□□□□ 0.8
SIGIRR-219ENST00000530683 FAM182BQ5T319 152 aa20.02■□□□□ 0.8
SIGIRR-219ENST00000530683 BRWD3Q6RI45 1802 aa20.02■□□□□ 0.79
SIGIRR-219ENST00000530683 DISP2A7MBM2 1401 aa20.02■□□□□ 0.79
SIGIRR-219ENST00000530683 CCDC125Q86Z20 511 aa20.01■□□□□ 0.79
SIGIRR-219ENST00000530683 EXOC5O00471 708 aa20■□□□□ 0.79
SIGIRR-219ENST00000530683 DDX10Q13206 875 aaKnown RBP19.99■□□□□ 0.79
SIGIRR-219ENST00000530683 MAP2P11137 1827 aaKnown RBP19.99■□□□□ 0.79
SIGIRR-219ENST00000530683 EIF4A2Q14240 407 aaKnown RBP19.98■□□□□ 0.79
SIGIRR-219ENST00000530683 FAM196AQ6ZSG2 479 aa19.98■□□□□ 0.79
SIGIRR-219ENST00000530683 USHBP1Q8N6Y0 703 aa19.98■□□□□ 0.79
SIGIRR-219ENST00000530683 MTHFSP49914 203 aa19.97■□□□□ 0.79
SIGIRR-219ENST00000530683 EYA1Q99502 592 aa19.96■□□□□ 0.79
SIGIRR-219ENST00000530683 PARP4Q9UKK3 1724 aaKnown RBP19.96■□□□□ 0.79
SIGIRR-219ENST00000530683 FAM208AQ9UK61 1670 aaKnown RBP19.95■□□□□ 0.78
SIGIRR-219ENST00000530683 MARCH10Q8NA82 808 aaPredicted RBP19.95■□□□□ 0.78
SIGIRR-219ENST00000530683 RAPGEF4Q8WZA2 1011 aa19.94■□□□□ 0.78
SIGIRR-219ENST00000530683 LRRC37A3O60309 1634 aa19.92■□□□□ 0.78
SIGIRR-219ENST00000530683 TATP17735 454 aaPredicted RBP19.92■□□□□ 0.78
SIGIRR-219ENST00000530683 TNS2Q63HR2 1409 aa19.92■□□□□ 0.78
SIGIRR-219ENST00000530683 ZNF316A6NFI3 1004 aaPredicted RBP19.91■□□□□ 0.78
SIGIRR-219ENST00000530683 SF3B2Q13435 895 aaKnown RBP19.91■□□□□ 0.78
SIGIRR-219ENST00000530683 ZCRB1Q8TBF4 217 aaKnown RBP19.91■□□□□ 0.78
SIGIRR-219ENST00000530683 RGPD2P0DJD1 1756 aa19.9■□□□□ 0.78
SIGIRR-219ENST00000530683 WNK3Q9BYP7 1800 aa19.9■□□□□ 0.78
SIGIRR-219ENST00000530683 TRIM37O94972 964 aa19.9■□□□□ 0.78
SIGIRR-219ENST00000530683 IL13P35225 146 aa19.9■□□□□ 0.78
SIGIRR-219ENST00000530683 OVOS2A0A0G2JMS6 1433 aa19.9■□□□□ 0.78
SIGIRR-219ENST00000530683 MEGF6O75095 1541 aa19.9■□□□□ 0.78
SIGIRR-219ENST00000530683 PPP2R1AP30153 589 aa19.89■□□□□ 0.77
SIGIRR-219ENST00000530683 NCAPD2Q15021 1401 aa19.89■□□□□ 0.77
SIGIRR-219ENST00000530683 IGSF1Q8N6C5 1336 aa19.89■□□□□ 0.77
SIGIRR-219ENST00000530683 DDX54Q8TDD1 881 aaKnown RBP19.89■□□□□ 0.77
SIGIRR-219ENST00000530683 BCL9O00512 1426 aa19.86■□□□□ 0.77
SIGIRR-219ENST00000530683 DIAPH1O60610 1272 aaKnown RBP19.86■□□□□ 0.77
SIGIRR-219ENST00000530683 DEFB132Q7Z7B7 95 aa19.85■□□□□ 0.77
SIGIRR-219ENST00000530683 PARD3Q8TEW0 1356 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms