RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 ZC3H6P61129 1189 aaKnown RBP6.69□□□□□ -1.34
SSBP3-213ENST00000530618 EZH2Q15910 746 aaKnown RBP6.69□□□□□ -1.34
SSBP3-213ENST00000530618 NUTM2GQ5VZR2 741 aa6.69□□□□□ -1.34
SSBP3-213ENST00000530618 LARP1Q6PKG0 1096 aaKnown RBP6.69□□□□□ -1.34
SSBP3-213ENST00000530618 BARGINQ6ZT62 677 aa6.69□□□□□ -1.34
SSBP3-213ENST00000530618 COL24A1Q17RW2 1714 aa6.69□□□□□ -1.34
SSBP3-213ENST00000530618 SHANK3Q9BYB0 1731 aa6.69□□□□□ -1.34
SSBP3-213ENST00000530618 ABCC6O95255 1503 aa6.69□□□□□ -1.34
SSBP3-213ENST00000530618 CENPJQ9HC77 1338 aaPredicted RBP6.69□□□□□ -1.34
SSBP3-213ENST00000530618 EIF4G2P78344 907 aaKnown RBP eCLIP6.68□□□□□ -1.34
SSBP3-213ENST00000530618 CDCA8Q53HL2 280 aa6.68□□□□□ -1.34
SSBP3-213ENST00000530618 CABP2Q9NPB3 220 aa6.68□□□□□ -1.34
SSBP3-213ENST00000530618 TUBGCP6Q96RT7 1819 aa6.68□□□□□ -1.34
SSBP3-213ENST00000530618 AATKQ6ZMQ8 1374 aa6.68□□□□□ -1.34
SSBP3-213ENST00000530618 PARD3Q8TEW0 1356 aa6.68□□□□□ -1.34
SSBP3-213ENST00000530618 MYOM1P52179 1685 aa6.68□□□□□ -1.34
SSBP3-213ENST00000530618 BCL9O00512 1426 aa6.67□□□□□ -1.34
SSBP3-213ENST00000530618 CRB1P82279 1406 aa6.67□□□□□ -1.34
SSBP3-213ENST00000530618 RGPD2P0DJD1 1756 aa6.67□□□□□ -1.34
SSBP3-213ENST00000530618 BTAF1O14981 1849 aa6.67□□□□□ -1.34
SSBP3-213ENST00000530618 TRIM37O94972 964 aa6.67□□□□□ -1.34
SSBP3-213ENST00000530618 GCP02774 474 aa6.67□□□□□ -1.34
SSBP3-213ENST00000530618 R3HDM1Q15032 1099 aaKnown RBP6.67□□□□□ -1.34
SSBP3-213ENST00000530618 STRN4Q9NRL3 753 aa6.67□□□□□ -1.34
SSBP3-213ENST00000530618 FAM208AQ9UK61 1670 aaKnown RBP6.66□□□□□ -1.34
SSBP3-213ENST00000530618 SF3B2Q13435 895 aaKnown RBP6.66□□□□□ -1.34
SSBP3-213ENST00000530618 FAM196AQ6ZSG2 479 aa6.66□□□□□ -1.34
SSBP3-213ENST00000530618 PTF1AQ7RTS3 328 aa6.66□□□□□ -1.34
SSBP3-213ENST00000530618 AXIN2Q9Y2T1 843 aa6.66□□□□□ -1.34
SSBP3-213ENST00000530618 QSER1Q2KHR3 1735 aa6.66□□□□□ -1.34
SSBP3-213ENST00000530618 SBNO2Q9Y2G9 1366 aa6.66□□□□□ -1.34
SSBP3-213ENST00000530618 A0A0G2JS52 829 aa6.65□□□□□ -1.34
SSBP3-213ENST00000530618 MYT1Q01538 1121 aa6.65□□□□□ -1.34
SSBP3-213ENST00000530618 TCP11L2Q8N4U5 519 aa6.65□□□□□ -1.34
SSBP3-213ENST00000530618 ABTB2Q8N961 1025 aa6.65□□□□□ -1.34
SSBP3-213ENST00000530618 CABP1Q9NZU7 370 aa6.65□□□□□ -1.34
SSBP3-213ENST00000530618 THRAP3Q9Y2W1 955 aaKnown RBP6.65□□□□□ -1.34
SSBP3-213ENST00000530618 USP47Q96K76 1375 aa6.65□□□□□ -1.35
SSBP3-213ENST00000530618 OVOS2A0A0G2JMS6 1433 aa6.65□□□□□ -1.35
SSBP3-213ENST00000530618 OVOS2A0A0J9YW53 1432 aa6.65□□□□□ -1.35
SSBP3-213ENST00000530618 OVOS2Q6IE36 1432 aa6.65□□□□□ -1.35
SSBP3-213ENST00000530618 TMF1P82094 1093 aa6.64□□□□□ -1.35
SSBP3-213ENST00000530618 ARHGEF25Q86VW2 580 aa6.64□□□□□ -1.35
SSBP3-213ENST00000530618 NLRP13Q86W25 1043 aa6.64□□□□□ -1.35
SSBP3-213ENST00000530618 ANO8Q9HCE9 1232 aaPredicted RBP6.64□□□□□ -1.35
SSBP3-213ENST00000530618 TTC21BQ7Z4L5 1316 aa6.64□□□□□ -1.35
SSBP3-213ENST00000530618 WDR17Q8IZU2 1322 aa6.64□□□□□ -1.35
SSBP3-213ENST00000530618 USP31Q70CQ4 1352 aa6.64□□□□□ -1.35
SSBP3-213ENST00000530618 TNS2Q63HR2 1409 aa6.64□□□□□ -1.35
SSBP3-213ENST00000530618 LY75O60449 1722 aa6.64□□□□□ -1.35
SSBP3-213ENST00000530618 HAX1O00165 279 aa6.63□□□□□ -1.35
SSBP3-213ENST00000530618 APBA3O96018 575 aa6.63□□□□□ -1.35
SSBP3-213ENST00000530618 SRPK2P78362 688 aaKnown RBP6.63□□□□□ -1.35
SSBP3-213ENST00000530618 EVC2Q86UK5 1308 aa6.63□□□□□ -1.35
SSBP3-213ENST00000530618 PROM2Q8N271 834 aa6.63□□□□□ -1.35
SSBP3-213ENST00000530618 USP35Q9P2H5 1018 aa6.63□□□□□ -1.35
SSBP3-213ENST00000530618 KAT6BQ8WYB5 2073 aa6.62□□□□□ -1.35
SSBP3-213ENST00000530618 DOT1LQ8TEK3 1739 aa6.62□□□□□ -1.35
SSBP3-213ENST00000530618 NLRP6P59044 892 aa6.62□□□□□ -1.35
SSBP3-213ENST00000530618 MARCH10Q8NA82 808 aaPredicted RBP6.62□□□□□ -1.35
SSBP3-213ENST00000530618 PDGFDQ9GZP0 370 aaPredicted RBP6.62□□□□□ -1.35
SSBP3-213ENST00000530618 CHD4Q14839 1912 aa6.62□□□□□ -1.35
SSBP3-213ENST00000530618 TTC21AQ8NDW8 1320 aa6.61□□□□□ -1.35
SSBP3-213ENST00000530618 POTEMA6NI47 508 aa6.61□□□□□ -1.35
SSBP3-213ENST00000530618 PLSCR1O15162 318 aa6.61□□□□□ -1.35
SSBP3-213ENST00000530618 PDE3BQ13370 1112 aa6.61□□□□□ -1.35
SSBP3-213ENST00000530618 CARD10Q9BWT7 1032 aa6.61□□□□□ -1.35
SSBP3-213ENST00000530618 NINLQ9Y2I6 1382 aa6.6□□□□□ -1.35
SSBP3-213ENST00000530618 KIF20BQ96Q89 1820 aa6.6□□□□□ -1.35
SSBP3-213ENST00000530618 ANKRD26Q9UPS8 1709 aa6.6□□□□□ -1.35
SSBP3-213ENST00000530618 TOGARAM1Q9Y4F4 1720 aa6.6□□□□□ -1.35
SSBP3-213ENST00000530618 ST20-MTHFSA0A0A6YYL1 179 aa6.6□□□□□ -1.35
SSBP3-213ENST00000530618 EVA1CP58658 441 aa6.6□□□□□ -1.35
SSBP3-213ENST00000530618 PUS7Q96PZ0 661 aaKnown RBP6.6□□□□□ -1.35
SSBP3-213ENST00000530618 TAF1LQ8IZX4 1826 aa6.6□□□□□ -1.35
SSBP3-213ENST00000530618 A0A1W2PP64 1363 aa6.59□□□□□ -1.35
SSBP3-213ENST00000530618 KTN1Q86UP2 1357 aaKnown RBP6.59□□□□□ -1.35
SSBP3-213ENST00000530618 ERBB3P21860 1342 aa6.59□□□□□ -1.35
SSBP3-213ENST00000530618 HSPA5P11021 654 aaKnown RBP6.59□□□□□ -1.35
SSBP3-213ENST00000530618 PTGER2P43116 358 aa6.59□□□□□ -1.35
SSBP3-213ENST00000530618 SGIP1Q9BQI5 828 aa6.59□□□□□ -1.35
SSBP3-213ENST00000530618 BCL11BQ9C0K0 894 aaPredicted RBP6.59□□□□□ -1.35
SSBP3-213ENST00000530618 EDC4Q6P2E9 1401 aaKnown RBP6.59□□□□□ -1.36
SSBP3-213ENST00000530618 CCDC7Q96M83 1385 aa6.58□□□□□ -1.36
SSBP3-213ENST00000530618 ITGB4P16144 1822 aa6.58□□□□□ -1.36
SSBP3-213ENST00000530618 DDB1Q16531 1140 aa6.58□□□□□ -1.36
SSBP3-213ENST00000530618 NME9Q86XW9 330 aa6.58□□□□□ -1.36
SSBP3-213ENST00000530618 TESK2Q96S53 571 aa6.58□□□□□ -1.36
SSBP3-213ENST00000530618 POLR3GLQ9BT43 218 aa6.58□□□□□ -1.36
SSBP3-213ENST00000530618 ZNF692Q9BU19 519 aaPredicted RBP6.58□□□□□ -1.36
SSBP3-213ENST00000530618 CEP350Q5VT06 3117 aa6.58□□□□□ -1.36
SSBP3-213ENST00000530618 NSD2O96028 1365 aa6.57□□□□□ -1.36
SSBP3-213ENST00000530618 MAP2P11137 1827 aaKnown RBP6.57□□□□□ -1.36
SSBP3-213ENST00000530618 PKD1L3Q7Z443 1732 aa6.57□□□□□ -1.36
SSBP3-213ENST00000530618 ZNF316A6NFI3 1004 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-213ENST00000530618 C11orf95C9JLR9 678 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-213ENST00000530618 KCNQ2O43526 872 aa6.57□□□□□ -1.36
SSBP3-213ENST00000530618 TOM1L2Q6ZVM7 507 aa6.57□□□□□ -1.36
SSBP3-213ENST00000530618 HDGFL2Q7Z4V5 671 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-213ENST00000530618 MEGF6O75095 1541 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms