RNA–Protein interactions for RNA: ENST00000530130.2

PDE4DIP-229, Transcript of phosphodiesterase 4D interacting protein, human

TSL 3

Gene PDE4DIP, Length 927 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-229	ENST00000530130	RTL1	A6NKG5	1358 aa		11.79	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	COL5A2	P05997	1499 aa	Predicted RBP	11.79	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	VPS72	Q15906	364 aa		11.79	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	EMILIN1	Q9Y6C2	1016 aa		11.79	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	ATRN	O75882	1429 aa		11.78	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	BLM	P54132	1417 aa	Predicted RBP	11.78	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	HOXC9	P31274	260 aa		11.78	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	AMPH	P49418	695 aa		11.78	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	POTEA	Q6S8J7	498 aa		11.78	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	QTRT2	Q9H974	415 aa	Known RBP	11.78	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	TRPC5	Q9UL62	973 aa	Predicted RBP	11.78	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	FLT4	P35916	1363 aa		11.78	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	PLCH1	Q4KWH8	1693 aa		11.78	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	SMG6	Q86US8	1419 aa	Known RBP	11.77	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	NWD2	Q9ULI1	1742 aa		11.77	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	ANKRD26	Q9UPS8	1709 aa		11.77	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	COL18A1	P39060	1754 aa		11.77	□□□□□ -0.52
PDE4DIP-229	ENST00000530130	EVA1C	P58658	441 aa		11.77	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	ERBB3	P21860	1342 aa		11.77	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	CNGB1	Q14028	1251 aa	Predicted RBP	11.76	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	LARP1	Q6PKG0	1096 aa	Known RBP	11.76	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	STRN4	Q9NRL3	753 aa		11.76	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	NRAP	Q86VF7	1730 aa		11.76	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	WDR17	Q8IZU2	1322 aa		11.76	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	INSR	P06213	1382 aa		11.76	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	PARD3	Q8TEW0	1356 aa		11.76	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.75	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	PPM1G	O15355	546 aa	Predicted RBP	11.75	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	HSP90AB2P	Q58FF8	381 aa		11.75	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	ANKRD24	Q8TF21	1146 aa		11.75	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	GJD4	Q96KN9	370 aa	Predicted RBP	11.75	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	SPATA31A5	Q5VU36	1347 aa		11.75	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	SPATA31A7	Q8IWB4	1347 aa		11.75	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	MTHFS	P49914	203 aa		11.74	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	RBM6	P78332	1123 aa	Known RBP	11.74	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	SPATA31A1	Q5TZJ5	1347 aa		11.74	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	CRB1	P82279	1406 aa		11.74	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	PEAK1	Q9H792	1746 aa		11.74	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	CSB-PGBD3	P0DP91	1061 aa		11.73	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	RXRB	P28702	533 aa		11.73	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	PPP2R1A	P30153	589 aa		11.73	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	RALBP1	Q15311	655 aa		11.73	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	TOM1L2	Q6ZVM7	507 aa		11.73	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.73	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	CCDC9	Q9Y3X0	531 aa	Known RBP	11.73	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	LTN1	O94822	1766 aa		11.72	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	ONECUT3	O60422	494 aa	Predicted RBP	11.72	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	LTV1	Q96GA3	475 aa	Predicted RBP	11.72	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	CARD10	Q9BWT7	1032 aa		11.72	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	GLI3	P10071	1580 aa		11.71	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	BARGIN	Q6ZT62	677 aa		11.71	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	TCP11L2	Q8N4U5	519 aa		11.71	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.71	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	NLRP2	Q9NX02	1062 aa		11.71	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	THRAP3	Q9Y2W1	955 aa	Known RBP	11.71	□□□□□ -0.53
PDE4DIP-229	ENST00000530130	EIF4A2	Q14240	407 aa	Known RBP	11.7	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	USP35	Q9P2H5	1018 aa		11.7	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	FAM98C	Q17RN3	349 aa	Known RBP	11.69	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	NBPF6	Q5VWK0	638 aa		11.69	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	NBPF4	Q96M43	638 aa		11.69	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.68	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	IL13	P35225	146 aa		11.68	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	COL3A1	P02461	1466 aa	Predicted RBP	11.68	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	DISP2	A7MBM2	1401 aa		11.68	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	RGS12	O14924	1447 aa		11.68	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	NCAPD2	Q15021	1401 aa		11.68	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	SEPT12	Q8IYM1	358 aa		11.67	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	CFAP53	Q96M91	514 aa		11.67	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	EYA1	Q99502	592 aa		11.67	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	IGSF1	Q8N6C5	1336 aa		11.66	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	DIAPH1	O60610	1272 aa	Known RBP	11.66	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.66	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	RGPD5	Q99666	1765 aa		11.66	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	FAM208A	Q9UK61	1670 aa	Known RBP	11.65	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	MAP2	P11137	1827 aa	Known RBP	11.65	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	ANP32C	O43423	234 aa		11.65	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	IL2RB	P14784	551 aa		11.65	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	ILDR2	Q71H61	639 aa		11.65	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	USHBP1	Q8N6Y0	703 aa		11.65	□□□□□ -0.54
PDE4DIP-229	ENST00000530130	THSD7A	Q9UPZ6	1657 aa		11.65	□□□□□ -0.55
PDE4DIP-229	ENST00000530130		A0A0G2JS52	829 aa		11.63	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	KDR	P35968	1356 aa		11.63	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	OVOS2	A0A0G2JMS6	1433 aa		11.62	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	MEGF6	O75095	1541 aa		11.62	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	DDB1	Q16531	1140 aa		11.62	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	RAPGEF4	Q8WZA2	1011 aa		11.62	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	RGPD1	P0DJD0	1748 aa		11.61	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	EXOC5	O00471	708 aa		11.61	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	TAT	P17735	454 aa	Predicted RBP	11.61	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	SULT6B1	Q6IMI4	303 aa		11.61	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	KRT27	Q7Z3Y8	459 aa		11.61	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	AEBP1	Q8IUX7	1158 aa		11.61	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	NUDC	Q9Y266	331 aa		11.61	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	PLEKHG2	Q9H7P9	1386 aa		11.61	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	TNS2	Q63HR2	1409 aa		11.6	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	U2SURP	O15042	1029 aa	Known RBP	11.6	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	PDE3B	Q13370	1112 aa		11.6	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	HMOX1	P09601	288 aa		11.59	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	DIEXF	Q68CQ4	756 aa	Known RBP	11.59	□□□□□ -0.55
PDE4DIP-229	ENST00000530130	ZCRB1	Q8TBF4	217 aa	Known RBP	11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms