RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 INSRP06213 1382 aa19.2■□□□□ 0.66
TTC39A-216ENST00000530004 KIF24Q5T7B8 1368 aa19.2■□□□□ 0.66
TTC39A-216ENST00000530004 CHRNA2Q15822 529 aa19.2■□□□□ 0.66
TTC39A-216ENST00000530004 FAM83GA6ND36 823 aa19.19■□□□□ 0.66
TTC39A-216ENST00000530004 ILDR1Q86SU0 546 aaPredicted RBP19.19■□□□□ 0.66
TTC39A-216ENST00000530004 RTL1A6NKG5 1358 aa19.19■□□□□ 0.66
TTC39A-216ENST00000530004 FLT4P35916 1363 aa19.19■□□□□ 0.66
TTC39A-216ENST00000530004 HOXC9P31274 260 aa19.19■□□□□ 0.66
TTC39A-216ENST00000530004 IP6K1Q92551 441 aa19.19■□□□□ 0.66
TTC39A-216ENST00000530004 ADAMTS8Q9UP79 889 aa19.19■□□□□ 0.66
TTC39A-216ENST00000530004 BLMP54132 1417 aaPredicted RBP19.18■□□□□ 0.66
TTC39A-216ENST00000530004 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
TTC39A-216ENST00000530004 AXIN2Q9Y2T1 843 aa19.17■□□□□ 0.66
TTC39A-216ENST00000530004 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
TTC39A-216ENST00000530004 PEAK1Q9H792 1746 aa19.17■□□□□ 0.66
TTC39A-216ENST00000530004 HSP90AB2PQ58FF8 381 aa19.16■□□□□ 0.66
TTC39A-216ENST00000530004 CFAP53Q96M91 514 aa19.16■□□□□ 0.66
TTC39A-216ENST00000530004 LTN1O94822 1766 aa19.16■□□□□ 0.66
TTC39A-216ENST00000530004 ABCC6O95255 1503 aa19.15■□□□□ 0.66
TTC39A-216ENST00000530004 SENP3-EIF4A1A0A087X0R7 540 aa19.15■□□□□ 0.66
TTC39A-216ENST00000530004 MEX3CQ5U5Q3 659 aaKnown RBP19.14■□□□□ 0.65
TTC39A-216ENST00000530004 C8orf37Q96NL8 207 aa19.14■□□□□ 0.65
TTC39A-216ENST00000530004 COL18A1P39060 1754 aa19.13■□□□□ 0.65
TTC39A-216ENST00000530004 LMO7Q8WWI1 1683 aa19.13■□□□□ 0.65
TTC39A-216ENST00000530004 CAMTA1Q9Y6Y1 1673 aa19.13■□□□□ 0.65
TTC39A-216ENST00000530004 COL14A1Q05707 1796 aaKnown RBP19.12■□□□□ 0.65
TTC39A-216ENST00000530004 NGLY1Q96IV0 654 aa19.12■□□□□ 0.65
TTC39A-216ENST00000530004 BTG4Q9NY30 223 aa19.12■□□□□ 0.65
TTC39A-216ENST00000530004 SLIT2O94813 1529 aa19.11■□□□□ 0.65
TTC39A-216ENST00000530004 COL3A1P02461 1466 aaPredicted RBP19.11■□□□□ 0.65
TTC39A-216ENST00000530004 ERBB3P21860 1342 aa19.1■□□□□ 0.65
TTC39A-216ENST00000530004 EIF4A2Q14240 407 aaKnown RBP19.1■□□□□ 0.65
TTC39A-216ENST00000530004 FNBP4Q8N3X1 1017 aaPredicted RBP19.1■□□□□ 0.65
TTC39A-216ENST00000530004 ANKRD24Q8TF21 1146 aa19.1■□□□□ 0.65
TTC39A-216ENST00000530004 COL5A2P05997 1499 aaPredicted RBP19.09■□□□□ 0.65
TTC39A-216ENST00000530004 DIAPH1O60610 1272 aaKnown RBP19.09■□□□□ 0.65
TTC39A-216ENST00000530004 LTV1Q96GA3 475 aaPredicted RBP19.09■□□□□ 0.65
TTC39A-216ENST00000530004 IL13P35225 146 aa19.09■□□□□ 0.65
TTC39A-216ENST00000530004 GTF3C3Q9Y5Q9 886 aa19.09■□□□□ 0.65
TTC39A-216ENST00000530004 SALL2Q9Y467 1007 aaPredicted RBP19.08■□□□□ 0.64
TTC39A-216ENST00000530004 STRN4Q9NRL3 753 aa19.07■□□□□ 0.64
TTC39A-216ENST00000530004 CSB-PGBD3P0DP91 1061 aa19.06■□□□□ 0.64
TTC39A-216ENST00000530004 EVA1CP58658 441 aa19.06■□□□□ 0.64
TTC39A-216ENST00000530004 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
TTC39A-216ENST00000530004 PLCH1Q4KWH8 1693 aa19.06■□□□□ 0.64
TTC39A-216ENST00000530004 UNC5CLQ8IV45 518 aa19.06■□□□□ 0.64
TTC39A-216ENST00000530004 WDR17Q8IZU2 1322 aa19.06■□□□□ 0.64
TTC39A-216ENST00000530004 BCL9LQ86UU0 1499 aa19.06■□□□□ 0.64
TTC39A-216ENST00000530004 AFF2P51816 1311 aa19.05■□□□□ 0.64
TTC39A-216ENST00000530004 RGPD5Q99666 1765 aa19.05■□□□□ 0.64
TTC39A-216ENST00000530004 NUDCQ9Y266 331 aa19.05■□□□□ 0.64
TTC39A-216ENST00000530004 LARP1Q6PKG0 1096 aaKnown RBP19.04■□□□□ 0.64
TTC39A-216ENST00000530004 USP21Q9UK80 565 aa19.04■□□□□ 0.64
TTC39A-216ENST00000530004 NWD2Q9ULI1 1742 aa19.04■□□□□ 0.64
TTC39A-216ENST00000530004 EYA1Q99502 592 aa19.04■□□□□ 0.64
TTC39A-216ENST00000530004 NBPF6Q5VWK0 638 aa19.03■□□□□ 0.64
TTC39A-216ENST00000530004 TOM1L2Q6ZVM7 507 aa19.03■□□□□ 0.64
TTC39A-216ENST00000530004 NBPF4Q96M43 638 aa19.03■□□□□ 0.64
TTC39A-216ENST00000530004 U2SURPO15042 1029 aaKnown RBP19.02■□□□□ 0.64
TTC39A-216ENST00000530004 U2AF1L5P0DN76 240 aaPredicted RBP19.02■□□□□ 0.64
TTC39A-216ENST00000530004 U2AF1Q01081 240 aaKnown RBP eCLIP19.02■□□□□ 0.64
TTC39A-216ENST00000530004 NLRP2Q9NX02 1062 aa19.02■□□□□ 0.64
TTC39A-216ENST00000530004 NRAPQ86VF7 1730 aa19.02■□□□□ 0.63
TTC39A-216ENST00000530004 IGSF1Q8N6C5 1336 aa19.02■□□□□ 0.63
TTC39A-216ENST00000530004 CRB1P82279 1406 aa19.01■□□□□ 0.63
TTC39A-216ENST00000530004 APAF1O14727 1248 aa19.01■□□□□ 0.63
TTC39A-216ENST00000530004 VPS72Q15906 364 aa18.99■□□□□ 0.63
TTC39A-216ENST00000530004 CARD10Q9BWT7 1032 aa18.99■□□□□ 0.63
TTC39A-216ENST00000530004 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
TTC39A-216ENST00000530004 USHBP1Q8N6Y0 703 aa18.98■□□□□ 0.63
TTC39A-216ENST00000530004 RUNDC1Q96C34 613 aa18.98■□□□□ 0.63
TTC39A-216ENST00000530004 NCAPD2Q15021 1401 aa18.98■□□□□ 0.63
TTC39A-216ENST00000530004 SULT6B1Q6IMI4 303 aa18.98■□□□□ 0.63
TTC39A-216ENST00000530004 RGPD1P0DJD0 1748 aa18.98■□□□□ 0.63
TTC39A-216ENST00000530004 FAM208AQ9UK61 1670 aaKnown RBP18.97■□□□□ 0.63
TTC39A-216ENST00000530004 HMOX1P09601 288 aa18.97■□□□□ 0.63
TTC39A-216ENST00000530004 ZNF772Q68DY9 489 aaPredicted RBP18.97■□□□□ 0.63
TTC39A-216ENST00000530004 AEBP1Q8IUX7 1158 aa18.97■□□□□ 0.63
TTC39A-216ENST00000530004 USP35Q9P2H5 1018 aa18.97■□□□□ 0.63
TTC39A-216ENST00000530004 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.97■□□□□ 0.63
TTC39A-216ENST00000530004 SPATA31A1Q5TZJ5 1347 aa18.97■□□□□ 0.63
TTC39A-216ENST00000530004 SPATA31A5Q5VU36 1347 aa18.97■□□□□ 0.63
TTC39A-216ENST00000530004 SPATA31A7Q8IWB4 1347 aa18.97■□□□□ 0.63
TTC39A-216ENST00000530004 TRPC5Q9UL62 973 aaPredicted RBP18.96■□□□□ 0.63
TTC39A-216ENST00000530004 CCDC9Q9Y3X0 531 aaKnown RBP18.96■□□□□ 0.63
TTC39A-216ENST00000530004 KDRP35968 1356 aa18.96■□□□□ 0.63
TTC39A-216ENST00000530004 ATRNO75882 1429 aa18.95■□□□□ 0.62
TTC39A-216ENST00000530004 FCHSD2O94868 740 aa18.95■□□□□ 0.62
TTC39A-216ENST00000530004 QTRT2Q9H974 415 aaKnown RBP18.95■□□□□ 0.62
TTC39A-216ENST00000530004 RGPD2P0DJD1 1756 aa18.95■□□□□ 0.62
TTC39A-216ENST00000530004 TCP11L2Q8N4U5 519 aa18.94■□□□□ 0.62
TTC39A-216ENST00000530004 NGEFQ8N5V2 710 aa18.93■□□□□ 0.62
TTC39A-216ENST00000530004 RSPH6AQ9H0K4 717 aa18.93■□□□□ 0.62
TTC39A-216ENST00000530004 RGS17Q9UGC6 210 aaPredicted RBP18.93■□□□□ 0.62
TTC39A-216ENST00000530004 THRAP3Q9Y2W1 955 aaKnown RBP18.93■□□□□ 0.62
TTC39A-216ENST00000530004 ZNF521Q96K83 1311 aa18.93■□□□□ 0.62
TTC39A-216ENST00000530004 CDCA7LQ96GN5 454 aa18.93■□□□□ 0.62
TTC39A-216ENST00000530004 GJD4Q96KN9 370 aaPredicted RBP18.93■□□□□ 0.62
TTC39A-216ENST00000530004 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
TTC39A-216ENST00000530004 PLEKHF1Q96S99 279 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms