RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
VPS11-203ENST00000529545 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
VPS11-203ENST00000529545 CPDO75976 1380 aa13.11□□□□□ -0.31
VPS11-203ENST00000529545 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
VPS11-203ENST00000529545 PLEKHG3A1L390 1219 aa13.11□□□□□ -0.31
VPS11-203ENST00000529545 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
VPS11-203ENST00000529545 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
VPS11-203ENST00000529545 TOPAZ1Q8N9V7 1692 aa13.09□□□□□ -0.31
VPS11-203ENST00000529545 GCP02774 474 aa13.09□□□□□ -0.31
VPS11-203ENST00000529545 USP19O94966 1318 aa13.09□□□□□ -0.31
VPS11-203ENST00000529545 LMO7Q8WWI1 1683 aa13.08□□□□□ -0.31
VPS11-203ENST00000529545 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.32
VPS11-203ENST00000529545 OVOS2A0A0G2JMS6 1433 aa13.08□□□□□ -0.32
VPS11-203ENST00000529545 OVOS2A0A0J9YW53 1432 aa13.08□□□□□ -0.32
VPS11-203ENST00000529545 OVOS2Q6IE36 1432 aa13.08□□□□□ -0.32
VPS11-203ENST00000529545 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.32
VPS11-203ENST00000529545 CRB1P82279 1406 aa13.07□□□□□ -0.32
VPS11-203ENST00000529545 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
VPS11-203ENST00000529545 PLSCR1O15162 318 aa13.07□□□□□ -0.32
VPS11-203ENST00000529545 SRPK2P78362 688 aaKnown RBP13.07□□□□□ -0.32
VPS11-203ENST00000529545 DDB1Q16531 1140 aa13.07□□□□□ -0.32
VPS11-203ENST00000529545 COL5A2P05997 1499 aaPredicted RBP13.06□□□□□ -0.32
VPS11-203ENST00000529545 BRD4O60885 1362 aaPredicted RBP13.06□□□□□ -0.32
VPS11-203ENST00000529545 RGPD3A6NKT7 1758 aaPredicted RBP13.05□□□□□ -0.32
VPS11-203ENST00000529545 RGPD4Q7Z3J3 1758 aa13.05□□□□□ -0.32
VPS11-203ENST00000529545 TOM1L2Q6ZVM7 507 aa13.05□□□□□ -0.32
VPS11-203ENST00000529545 BCL11BQ9C0K0 894 aaPredicted RBP13.05□□□□□ -0.32
VPS11-203ENST00000529545 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
VPS11-203ENST00000529545 NLRP6P59044 892 aa13.04□□□□□ -0.32
VPS11-203ENST00000529545 SPDYE1Q8NFV5 336 aaPredicted RBP13.04□□□□□ -0.32
VPS11-203ENST00000529545 KIAA1210Q9ULL0 1709 aa13.03□□□□□ -0.32
VPS11-203ENST00000529545 CDCA7Q9BWT1 371 aaPredicted RBP13.03□□□□□ -0.32
VPS11-203ENST00000529545 SBF2Q86WG5 1849 aa13.03□□□□□ -0.32
VPS11-203ENST00000529545 AATKQ6ZMQ8 1374 aa13.03□□□□□ -0.32
VPS11-203ENST00000529545 PEAK1Q9H792 1746 aa13.02□□□□□ -0.32
VPS11-203ENST00000529545 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
VPS11-203ENST00000529545 CENPJQ9HC77 1338 aaPredicted RBP13.02□□□□□ -0.33
VPS11-203ENST00000529545 LRRC37A3O60309 1634 aa13.02□□□□□ -0.33
VPS11-203ENST00000529545 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
VPS11-203ENST00000529545 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
VPS11-203ENST00000529545 ZBTB7AO95365 584 aa13□□□□□ -0.33
VPS11-203ENST00000529545 CSB-PGBD3P0DP91 1061 aa13□□□□□ -0.33
VPS11-203ENST00000529545 CABP1Q9NZU7 370 aa13□□□□□ -0.33
VPS11-203ENST00000529545 AKAP12Q02952 1782 aa12.99□□□□□ -0.33
VPS11-203ENST00000529545 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
VPS11-203ENST00000529545 USP6P35125 1406 aa12.99□□□□□ -0.33
VPS11-203ENST00000529545 WDR17Q8IZU2 1322 aa12.99□□□□□ -0.33
VPS11-203ENST00000529545 NBPF1Q3BBV0 1214 aa12.99□□□□□ -0.33
VPS11-203ENST00000529545 EXOC5O00471 708 aa12.98□□□□□ -0.33
VPS11-203ENST00000529545 TXNRD1Q16881 649 aa12.98□□□□□ -0.33
VPS11-203ENST00000529545 MARCH10Q8NA82 808 aaPredicted RBP12.98□□□□□ -0.33
VPS11-203ENST00000529545 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
VPS11-203ENST00000529545 SLIT3O75094 1523 aa12.98□□□□□ -0.33
VPS11-203ENST00000529545 BCL9O00512 1426 aa12.97□□□□□ -0.33
VPS11-203ENST00000529545 PTF1AQ7RTS3 328 aa12.97□□□□□ -0.33
VPS11-203ENST00000529545 PROM2Q8N271 834 aa12.97□□□□□ -0.33
VPS11-203ENST00000529545 WNK3Q9BYP7 1800 aa12.97□□□□□ -0.33
VPS11-203ENST00000529545 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.33
VPS11-203ENST00000529545 PTGER2P43116 358 aa12.96□□□□□ -0.33
VPS11-203ENST00000529545 SLC15A2Q16348 729 aa12.96□□□□□ -0.33
VPS11-203ENST00000529545 ZNF784Q8NCA9 323 aaPredicted RBP12.96□□□□□ -0.33
VPS11-203ENST00000529545 CARD10Q9BWT7 1032 aa12.96□□□□□ -0.33
VPS11-203ENST00000529545 PDGFDQ9GZP0 370 aaPredicted RBP12.96□□□□□ -0.33
VPS11-203ENST00000529545 MTFR1LQ9H019 292 aa12.96□□□□□ -0.33
VPS11-203ENST00000529545 AXIN2Q9Y2T1 843 aa12.96□□□□□ -0.33
VPS11-203ENST00000529545 MYOM1P52179 1685 aa12.96□□□□□ -0.34
VPS11-203ENST00000529545 EVC2Q86UK5 1308 aa12.95□□□□□ -0.34
VPS11-203ENST00000529545 COL18A1P39060 1754 aa12.95□□□□□ -0.34
VPS11-203ENST00000529545 SYT17Q9BSW7 474 aa12.95□□□□□ -0.34
VPS11-203ENST00000529545 FHDC1Q9C0D6 1143 aaPredicted RBP12.95□□□□□ -0.34
VPS11-203ENST00000529545 CPSF1Q10570 1443 aaKnown RBP12.95□□□□□ -0.34
VPS11-203ENST00000529545 PIK3C2AO00443 1686 aa12.94□□□□□ -0.34
VPS11-203ENST00000529545 SOX12O15370 315 aa12.94□□□□□ -0.34
VPS11-203ENST00000529545 ARHGEF25Q86VW2 580 aa12.94□□□□□ -0.34
VPS11-203ENST00000529545 CCDC7Q96M83 1385 aa12.94□□□□□ -0.34
VPS11-203ENST00000529545 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
VPS11-203ENST00000529545 CLEC11AQ9Y240 323 aa12.93□□□□□ -0.34
VPS11-203ENST00000529545 RGPD5Q99666 1765 aa12.93□□□□□ -0.34
VPS11-203ENST00000529545 TTC21BQ7Z4L5 1316 aa12.92□□□□□ -0.34
VPS11-203ENST00000529545 TTC21AQ8NDW8 1320 aa12.92□□□□□ -0.34
VPS11-203ENST00000529545 CHD4Q14839 1912 aa12.92□□□□□ -0.34
VPS11-203ENST00000529545 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
VPS11-203ENST00000529545 SENP3-EIF4A1A0A087X0R7 540 aa12.91□□□□□ -0.34
VPS11-203ENST00000529545 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
VPS11-203ENST00000529545 ARXQ96QS3 562 aa12.91□□□□□ -0.34
VPS11-203ENST00000529545 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
VPS11-203ENST00000529545 TNS2Q63HR2 1409 aa12.89□□□□□ -0.35
VPS11-203ENST00000529545 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
VPS11-203ENST00000529545 NLRP2Q9NX02 1062 aa12.89□□□□□ -0.35
VPS11-203ENST00000529545 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
VPS11-203ENST00000529545 C1QTNF8P60827 252 aa12.88□□□□□ -0.35
VPS11-203ENST00000529545 GPR162Q16538 588 aa12.88□□□□□ -0.35
VPS11-203ENST00000529545 SGIP1Q9BQI5 828 aa12.88□□□□□ -0.35
VPS11-203ENST00000529545 KTN1Q86UP2 1357 aaKnown RBP12.88□□□□□ -0.35
VPS11-203ENST00000529545 ABCC6O95255 1503 aa12.88□□□□□ -0.35
VPS11-203ENST00000529545 IL2RBP14784 551 aa12.87□□□□□ -0.35
VPS11-203ENST00000529545 KAT6BQ8WYB5 2073 aa12.87□□□□□ -0.35
VPS11-203ENST00000529545 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
VPS11-203ENST00000529545 POLD1P28340 1107 aa12.86□□□□□ -0.35
VPS11-203ENST00000529545 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms