RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PEAK1Q9H792 1746 aa16.41■□□□□ 0.22
TRAF3IP2-211ENST00000528599 FAM83GA6ND36 823 aa16.4■□□□□ 0.22
TRAF3IP2-211ENST00000528599 PPM1GO15355 546 aaPredicted RBP16.4■□□□□ 0.22
TRAF3IP2-211ENST00000528599 KIAA0232Q92628 1395 aa16.4■□□□□ 0.22
TRAF3IP2-211ENST00000528599 LTN1O94822 1766 aa16.4■□□□□ 0.22
TRAF3IP2-211ENST00000528599 CPDO75976 1380 aa16.4■□□□□ 0.22
TRAF3IP2-211ENST00000528599 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
TRAF3IP2-211ENST00000528599 NRAPQ86VF7 1730 aa16.38■□□□□ 0.21
TRAF3IP2-211ENST00000528599 AMPHP49418 695 aa16.38■□□□□ 0.21
TRAF3IP2-211ENST00000528599 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.38■□□□□ 0.21
TRAF3IP2-211ENST00000528599 COL14A1Q05707 1796 aaKnown RBP16.38■□□□□ 0.21
TRAF3IP2-211ENST00000528599 HOXC9P31274 260 aa16.37■□□□□ 0.21
TRAF3IP2-211ENST00000528599 CHRNA2Q15822 529 aa16.37■□□□□ 0.21
TRAF3IP2-211ENST00000528599 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
TRAF3IP2-211ENST00000528599 USP21Q9UK80 565 aa16.37■□□□□ 0.21
TRAF3IP2-211ENST00000528599 NWD2Q9ULI1 1742 aa16.37■□□□□ 0.21
TRAF3IP2-211ENST00000528599 CDK12Q9NYV4 1490 aaPredicted RBP16.37■□□□□ 0.21
TRAF3IP2-211ENST00000528599 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
TRAF3IP2-211ENST00000528599 IP6K1Q92551 441 aa16.37■□□□□ 0.21
TRAF3IP2-211ENST00000528599 PRDM11Q9NQV5 511 aa16.37■□□□□ 0.21
TRAF3IP2-211ENST00000528599 LMO7Q8WWI1 1683 aa16.36■□□□□ 0.21
TRAF3IP2-211ENST00000528599 FLT4P35916 1363 aa16.36■□□□□ 0.21
TRAF3IP2-211ENST00000528599 KIF24Q5T7B8 1368 aa16.36■□□□□ 0.21
TRAF3IP2-211ENST00000528599 COL18A1P39060 1754 aa16.36■□□□□ 0.21
TRAF3IP2-211ENST00000528599 CCER2I3L3R5 266 aa16.36■□□□□ 0.21
TRAF3IP2-211ENST00000528599 AXIN2Q9Y2T1 843 aa16.36■□□□□ 0.21
TRAF3IP2-211ENST00000528599 EP400Q96L91 3159 aa16.36■□□□□ 0.21
TRAF3IP2-211ENST00000528599 RTL1A6NKG5 1358 aa16.35■□□□□ 0.21
TRAF3IP2-211ENST00000528599 INSRP06213 1382 aa16.35■□□□□ 0.21
TRAF3IP2-211ENST00000528599 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
TRAF3IP2-211ENST00000528599 ATRNO75882 1429 aa16.35■□□□□ 0.21
TRAF3IP2-211ENST00000528599 QTRT2Q9H974 415 aaKnown RBP16.34■□□□□ 0.21
TRAF3IP2-211ENST00000528599 MRS2Q9HD23 443 aa16.34■□□□□ 0.21
TRAF3IP2-211ENST00000528599 CFAP53Q96M91 514 aa16.34■□□□□ 0.21
TRAF3IP2-211ENST00000528599 BTG4Q9NY30 223 aa16.34■□□□□ 0.21
TRAF3IP2-211ENST00000528599 CAMTA1Q9Y6Y1 1673 aa16.33■□□□□ 0.21
TRAF3IP2-211ENST00000528599 UNC5CLQ8IV45 518 aa16.33■□□□□ 0.2
TRAF3IP2-211ENST00000528599 GLI3P10071 1580 aa16.32■□□□□ 0.2
TRAF3IP2-211ENST00000528599 ABCC6O95255 1503 aa16.32■□□□□ 0.2
TRAF3IP2-211ENST00000528599 RGPD5Q99666 1765 aa16.32■□□□□ 0.2
TRAF3IP2-211ENST00000528599 EIF4A2Q14240 407 aaKnown RBP16.31■□□□□ 0.2
TRAF3IP2-211ENST00000528599 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
TRAF3IP2-211ENST00000528599 DIAPH1O60610 1272 aaKnown RBP16.3■□□□□ 0.2
TRAF3IP2-211ENST00000528599 IL13P35225 146 aa16.3■□□□□ 0.2
TRAF3IP2-211ENST00000528599 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
TRAF3IP2-211ENST00000528599 TRPC5Q9UL62 973 aaPredicted RBP16.3■□□□□ 0.2
TRAF3IP2-211ENST00000528599 ANKRD24Q8TF21 1146 aa16.29■□□□□ 0.2
TRAF3IP2-211ENST00000528599 RXRBP28702 533 aa16.28■□□□□ 0.2
TRAF3IP2-211ENST00000528599 PNISRQ8TF01 805 aaKnown RBP16.28■□□□□ 0.2
TRAF3IP2-211ENST00000528599 COL5A2P05997 1499 aaPredicted RBP16.28■□□□□ 0.2
TRAF3IP2-211ENST00000528599 RGS12O14924 1447 aa16.28■□□□□ 0.2
TRAF3IP2-211ENST00000528599 ERBB3P21860 1342 aa16.28■□□□□ 0.2
TRAF3IP2-211ENST00000528599 RBM6P78332 1123 aaKnown RBP16.27■□□□□ 0.19
TRAF3IP2-211ENST00000528599 VPS72Q15906 364 aa16.27■□□□□ 0.19
TRAF3IP2-211ENST00000528599 GJD4Q96KN9 370 aaPredicted RBP16.27■□□□□ 0.19
TRAF3IP2-211ENST00000528599 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
TRAF3IP2-211ENST00000528599 EYA1Q99502 592 aa16.25■□□□□ 0.19
TRAF3IP2-211ENST00000528599 STRN4Q9NRL3 753 aa16.25■□□□□ 0.19
TRAF3IP2-211ENST00000528599 NUDCQ9Y266 331 aa16.25■□□□□ 0.19
TRAF3IP2-211ENST00000528599 NBPF6Q5VWK0 638 aa16.24■□□□□ 0.19
TRAF3IP2-211ENST00000528599 NBPF4Q96M43 638 aa16.24■□□□□ 0.19
TRAF3IP2-211ENST00000528599 RGPD1P0DJD0 1748 aa16.24■□□□□ 0.19
TRAF3IP2-211ENST00000528599 WDR17Q8IZU2 1322 aa16.24■□□□□ 0.19
TRAF3IP2-211ENST00000528599 CSB-PGBD3P0DP91 1061 aa16.24■□□□□ 0.19
TRAF3IP2-211ENST00000528599 EVA1CP58658 441 aa16.24■□□□□ 0.19
TRAF3IP2-211ENST00000528599 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRAF3IP2-211ENST00000528599 LARP1Q6PKG0 1096 aaKnown RBP16.24■□□□□ 0.19
TRAF3IP2-211ENST00000528599 ADAMTS8Q9UP79 889 aa16.24■□□□□ 0.19
TRAF3IP2-211ENST00000528599 RGPD2P0DJD1 1756 aa16.23■□□□□ 0.19
TRAF3IP2-211ENST00000528599 IGSF1Q8N6C5 1336 aa16.23■□□□□ 0.19
TRAF3IP2-211ENST00000528599 U2AF1L5P0DN76 240 aaPredicted RBP16.23■□□□□ 0.19
TRAF3IP2-211ENST00000528599 U2AF1Q01081 240 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRAF3IP2-211ENST00000528599 FAM9BQ8IZU0 186 aa16.23■□□□□ 0.19
TRAF3IP2-211ENST00000528599 SPATA31A5Q5VU36 1347 aa16.22■□□□□ 0.19
TRAF3IP2-211ENST00000528599 SPATA31A7Q8IWB4 1347 aa16.22■□□□□ 0.19
TRAF3IP2-211ENST00000528599 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
TRAF3IP2-211ENST00000528599 NLRP2Q9NX02 1062 aa16.22■□□□□ 0.19
TRAF3IP2-211ENST00000528599 AEBP1Q8IUX7 1158 aa16.21■□□□□ 0.19
TRAF3IP2-211ENST00000528599 CCDC9Q9Y3X0 531 aaKnown RBP16.21■□□□□ 0.19
TRAF3IP2-211ENST00000528599 SPATA31A1Q5TZJ5 1347 aa16.21■□□□□ 0.19
TRAF3IP2-211ENST00000528599 HMOX1P09601 288 aa16.21■□□□□ 0.18
TRAF3IP2-211ENST00000528599 SULT6B1Q6IMI4 303 aa16.21■□□□□ 0.18
TRAF3IP2-211ENST00000528599 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.18
TRAF3IP2-211ENST00000528599 BRWD3Q6RI45 1802 aa16.2■□□□□ 0.18
TRAF3IP2-211ENST00000528599 FAM208AQ9UK61 1670 aaKnown RBP16.2■□□□□ 0.18
TRAF3IP2-211ENST00000528599 USP35Q9P2H5 1018 aa16.2■□□□□ 0.18
TRAF3IP2-211ENST00000528599 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
TRAF3IP2-211ENST00000528599 FAM98CQ17RN3 349 aaKnown RBP16.19■□□□□ 0.18
TRAF3IP2-211ENST00000528599 CARD10Q9BWT7 1032 aa16.19■□□□□ 0.18
TRAF3IP2-211ENST00000528599 CRB1P82279 1406 aa16.19■□□□□ 0.18
TRAF3IP2-211ENST00000528599 THSD7AQ9UPZ6 1657 aa16.19■□□□□ 0.18
TRAF3IP2-211ENST00000528599 KDRP35968 1356 aa16.18■□□□□ 0.18
TRAF3IP2-211ENST00000528599 ONECUT3O60422 494 aaPredicted RBP16.18■□□□□ 0.18
TRAF3IP2-211ENST00000528599 RSPH6AQ9H0K4 717 aa16.18■□□□□ 0.18
TRAF3IP2-211ENST00000528599 FCHSD2O94868 740 aa16.18■□□□□ 0.18
TRAF3IP2-211ENST00000528599 PRKAR2BP31323 418 aa16.16■□□□□ 0.18
TRAF3IP2-211ENST00000528599 CCDC146Q8IYE0 955 aa16.16■□□□□ 0.18
TRAF3IP2-211ENST00000528599 SEPT12Q8IYM1 358 aa16.16■□□□□ 0.18
TRAF3IP2-211ENST00000528599 PLEKHF1Q96S99 279 aa16.15■□□□□ 0.18
TRAF3IP2-211ENST00000528599 WNK3Q9BYP7 1800 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms