RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	SRCAP	Q6ZRS2	3230 aa		16.43	■□□□□ 0.22
PSMC3-205	ENST00000528362	CCDC125	Q86Z20	511 aa		16.43	■□□□□ 0.22
PSMC3-205	ENST00000528362	BLM	P54132	1417 aa	Predicted RBP	16.43	■□□□□ 0.22
PSMC3-205	ENST00000528362	CRB1	P82279	1406 aa		16.43	■□□□□ 0.22
PSMC3-205	ENST00000528362	THRAP3	Q9Y2W1	955 aa	Known RBP	16.42	■□□□□ 0.22
PSMC3-205	ENST00000528362	WDR17	Q8IZU2	1322 aa		16.42	■□□□□ 0.22
PSMC3-205	ENST00000528362	USP54	Q70EL1	1684 aa		16.41	■□□□□ 0.22
PSMC3-205	ENST00000528362	HSPA5	P11021	654 aa	Known RBP	16.41	■□□□□ 0.22
PSMC3-205	ENST00000528362	EIF4G2	P78344	907 aa	Known RBP eCLIP	16.41	■□□□□ 0.22
PSMC3-205	ENST00000528362	FAM182B	Q5T319	152 aa		16.41	■□□□□ 0.22
PSMC3-205	ENST00000528362	COL18A1	P39060	1754 aa		16.4	■□□□□ 0.22
PSMC3-205	ENST00000528362	BRWD3	Q6RI45	1802 aa		16.4	■□□□□ 0.22
PSMC3-205	ENST00000528362	ABCC6	O95255	1503 aa		16.4	■□□□□ 0.22
PSMC3-205	ENST00000528362	TOM1L2	Q6ZVM7	507 aa		16.39	■□□□□ 0.21
PSMC3-205	ENST00000528362	COG3	Q96JB2	828 aa		16.38	■□□□□ 0.21
PSMC3-205	ENST00000528362	FYB1	O15117	783 aa		16.37	■□□□□ 0.21
PSMC3-205	ENST00000528362	CSB-PGBD3	P0DP91	1061 aa		16.37	■□□□□ 0.21
PSMC3-205	ENST00000528362	CARD14	Q9BXL6	1004 aa		16.37	■□□□□ 0.21
PSMC3-205	ENST00000528362	DEFB132	Q7Z7B7	95 aa		16.36	■□□□□ 0.21
PSMC3-205	ENST00000528362	CARD10	Q9BWT7	1032 aa		16.36	■□□□□ 0.21
PSMC3-205	ENST00000528362	GGNBP2	Q9H3C7	697 aa		16.36	■□□□□ 0.21
PSMC3-205	ENST00000528362	ERBB3	P21860	1342 aa		16.36	■□□□□ 0.21
PSMC3-205	ENST00000528362	PDE3B	Q13370	1112 aa		16.35	■□□□□ 0.21
PSMC3-205	ENST00000528362	SF3B2	Q13435	895 aa	Known RBP	16.35	■□□□□ 0.21
PSMC3-205	ENST00000528362	FBLN1	P23142	703 aa		16.34	■□□□□ 0.21
PSMC3-205	ENST00000528362	FAM196A	Q6ZSG2	479 aa		16.34	■□□□□ 0.21
PSMC3-205	ENST00000528362	MAP3K19	Q56UN5	1328 aa		16.34	■□□□□ 0.21
PSMC3-205	ENST00000528362	NSD3	Q9BZ95	1437 aa		16.34	■□□□□ 0.21
PSMC3-205	ENST00000528362	IP6K1	Q92551	441 aa		16.33	■□□□□ 0.2
PSMC3-205	ENST00000528362	DISP2	A7MBM2	1401 aa		16.33	■□□□□ 0.2
PSMC3-205	ENST00000528362	MYOM1	P52179	1685 aa		16.33	■□□□□ 0.2
PSMC3-205	ENST00000528362	ANKRD24	Q8TF21	1146 aa		16.32	■□□□□ 0.2
PSMC3-205	ENST00000528362	POLR3GL	Q9BT43	218 aa		16.32	■□□□□ 0.2
PSMC3-205	ENST00000528362	CCDC7	Q96M83	1385 aa		16.31	■□□□□ 0.2
PSMC3-205	ENST00000528362	CDCA7	Q9BWT1	371 aa	Predicted RBP	16.31	■□□□□ 0.2
PSMC3-205	ENST00000528362	NLRP2	Q9NX02	1062 aa		16.31	■□□□□ 0.2
PSMC3-205	ENST00000528362	TRIM37	O94972	964 aa		16.3	■□□□□ 0.2
PSMC3-205	ENST00000528362	HOXC9	P31274	260 aa		16.3	■□□□□ 0.2
PSMC3-205	ENST00000528362	BAG6	P46379	1132 aa		16.3	■□□□□ 0.2
PSMC3-205	ENST00000528362	RRS1	Q15050	365 aa	Known RBP	16.3	■□□□□ 0.2
PSMC3-205	ENST00000528362	DDB1	Q16531	1140 aa		16.3	■□□□□ 0.2
PSMC3-205	ENST00000528362	PARP4	Q9UKK3	1724 aa	Known RBP	16.29	■□□□□ 0.2
PSMC3-205	ENST00000528362	C11orf95	C9JLR9	678 aa	Predicted RBP	16.29	■□□□□ 0.2
PSMC3-205	ENST00000528362	RTL1	A6NKG5	1358 aa		16.28	■□□□□ 0.2
PSMC3-205	ENST00000528362	LRRC37A3	O60309	1634 aa		16.28	■□□□□ 0.2
PSMC3-205	ENST00000528362	AMPH	P49418	695 aa		16.28	■□□□□ 0.2
PSMC3-205	ENST00000528362	OVOS2	A0A0G2JMS6	1433 aa		16.28	■□□□□ 0.2
PSMC3-205	ENST00000528362	CGNL1	Q0VF96	1302 aa		16.27	■□□□□ 0.2
PSMC3-205	ENST00000528362	EN1	Q05925	392 aa	Predicted RBP	16.27	■□□□□ 0.2
PSMC3-205	ENST00000528362	MARCH10	Q8NA82	808 aa	Predicted RBP	16.27	■□□□□ 0.2
PSMC3-205	ENST00000528362	LTV1	Q96GA3	475 aa	Predicted RBP	16.27	■□□□□ 0.2
PSMC3-205	ENST00000528362	TNS2	Q63HR2	1409 aa		16.26	■□□□□ 0.19
PSMC3-205	ENST00000528362	PANK3	Q9H999	370 aa		16.25	■□□□□ 0.19
PSMC3-205	ENST00000528362	LTN1	O94822	1766 aa		16.25	■□□□□ 0.19
PSMC3-205	ENST00000528362	RGPD5	Q99666	1765 aa		16.25	■□□□□ 0.19
PSMC3-205	ENST00000528362	EXOC5	O00471	708 aa		16.24	■□□□□ 0.19
PSMC3-205	ENST00000528362	APBA3	O96018	575 aa		16.24	■□□□□ 0.19
PSMC3-205	ENST00000528362	IL2RB	P14784	551 aa		16.24	■□□□□ 0.19
PSMC3-205	ENST00000528362	BCL9	O00512	1426 aa		16.24	■□□□□ 0.19
PSMC3-205	ENST00000528362	CAMKK2	Q96RR4	588 aa		16.23	■□□□□ 0.19
PSMC3-205	ENST00000528362	RGPD1	P0DJD0	1748 aa		16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	PEAK1	Q9H792	1746 aa		16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	TNS1	Q9HBL0	1735 aa	Known RBP	16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	KIF7	Q2M1P5	1343 aa		16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	EZH2	Q15910	746 aa	Known RBP	16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	HSP90AB2P	Q58FF8	381 aa		16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	EMILIN1	Q9Y6C2	1016 aa		16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	INSR	P06213	1382 aa		16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	FLT4	P35916	1363 aa		16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	KIF24	Q5T7B8	1368 aa		16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	WNK3	Q9BYP7	1800 aa		16.22	■□□□□ 0.19
PSMC3-205	ENST00000528362	PTF1A	Q7RTS3	328 aa		16.21	■□□□□ 0.19
PSMC3-205	ENST00000528362	KIF20B	Q96Q89	1820 aa		16.2	■□□□□ 0.18
PSMC3-205	ENST00000528362	NBPF6	Q5VWK0	638 aa		16.2	■□□□□ 0.18
PSMC3-205	ENST00000528362	NBPF4	Q96M43	638 aa		16.2	■□□□□ 0.18
PSMC3-205	ENST00000528362	PARD3	Q8TEW0	1356 aa		16.19	■□□□□ 0.18
PSMC3-205	ENST00000528362	SMG6	Q86US8	1419 aa	Known RBP	16.19	■□□□□ 0.18
PSMC3-205	ENST00000528362	USHBP1	Q8N6Y0	703 aa		16.18	■□□□□ 0.18
PSMC3-205	ENST00000528362	BCL11B	Q9C0K0	894 aa	Predicted RBP	16.18	■□□□□ 0.18
PSMC3-205	ENST00000528362	POLK	Q9UBT6	870 aa		16.18	■□□□□ 0.18
PSMC3-205	ENST00000528362	NSD2	O96028	1365 aa		16.17	■□□□□ 0.18
PSMC3-205	ENST00000528362	MEGF6	O75095	1541 aa		16.17	■□□□□ 0.18
PSMC3-205	ENST00000528362	FAM208A	Q9UK61	1670 aa	Known RBP	16.16	■□□□□ 0.18
PSMC3-205	ENST00000528362	PPM1G	O15355	546 aa	Predicted RBP	16.16	■□□□□ 0.18
PSMC3-205	ENST00000528362	TNNT2	P45379	298 aa	Predicted RBP	16.16	■□□□□ 0.18
PSMC3-205	ENST00000528362	WASHC2A	Q641Q2	1341 aa		16.16	■□□□□ 0.18
PSMC3-205	ENST00000528362	PSD	A5PKW4	1024 aa	Predicted RBP	16.15	■□□□□ 0.18
PSMC3-205	ENST00000528362	PLSCR1	O15162	318 aa		16.14	■□□□□ 0.17
PSMC3-205	ENST00000528362	KCNQ2	O43526	872 aa		16.14	■□□□□ 0.17
PSMC3-205	ENST00000528362	DDX54	Q8TDD1	881 aa	Known RBP	16.14	■□□□□ 0.17
PSMC3-205	ENST00000528362	KNSTRN	Q9Y448	316 aa		16.14	■□□□□ 0.17
PSMC3-205	ENST00000528362	R3HDM1	Q15032	1099 aa	Known RBP	16.13	■□□□□ 0.17
PSMC3-205	ENST00000528362	AMER1	Q5JTC6	1135 aa	Predicted RBP	16.13	■□□□□ 0.17
PSMC3-205	ENST00000528362	ACSBG1	Q96GR2	724 aa		16.13	■□□□□ 0.17
PSMC3-205	ENST00000528362	NCAPD2	Q15021	1401 aa		16.12	■□□□□ 0.17
PSMC3-205	ENST00000528362	ZCRB1	Q8TBF4	217 aa	Known RBP	16.12	■□□□□ 0.17
PSMC3-205	ENST00000528362	RAPGEF4	Q8WZA2	1011 aa		16.12	■□□□□ 0.17
PSMC3-205	ENST00000528362	MORC1	Q86VD1	984 aa		16.11	■□□□□ 0.17
PSMC3-205	ENST00000528362	ANKRD26	Q9UPS8	1709 aa		16.11	■□□□□ 0.17
PSMC3-205	ENST00000528362	PROM2	Q8N271	834 aa		16.1	■□□□□ 0.17

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms