RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 CAVIN1Q6NZI2 390 aaKnown RBP9.17□□□□□ -0.94
SOX6-208ENST00000527619 CFDP1Q9UEE9 299 aaPredicted RBP9.17□□□□□ -0.94
SOX6-208ENST00000527619 FAM69CQ0P6D2 419 aa9.16□□□□□ -0.94
SOX6-208ENST00000527619 LMOD3Q0VAK6 560 aa9.16□□□□□ -0.94
SOX6-208ENST00000527619 NBPF11Q86T75 865 aa9.16□□□□□ -0.94
SOX6-208ENST00000527619 TNNQ9UQP3 1299 aa9.16□□□□□ -0.94
SOX6-208ENST00000527619 ASXL2Q76L83 1435 aa9.16□□□□□ -0.94
SOX6-208ENST00000527619 NUP153P49790 1475 aaKnown RBP9.16□□□□□ -0.94
SOX6-208ENST00000527619 NPC1L1Q9UHC9 1359 aa9.16□□□□□ -0.94
SOX6-208ENST00000527619 KIAA2012Q0VF49 1180 aa9.16□□□□□ -0.94
SOX6-208ENST00000527619 ZNF710Q8N1W2 664 aa9.16□□□□□ -0.94
SOX6-208ENST00000527619 PRIMPOLQ96LW4 560 aa9.16□□□□□ -0.94
SOX6-208ENST00000527619 MYO5CQ9NQX4 1742 aa9.15□□□□□ -0.94
SOX6-208ENST00000527619 PLEKHD1A6NEE1 506 aa9.15□□□□□ -0.94
SOX6-208ENST00000527619 GTF2F1P35269 517 aaKnown RBP eCLIP9.15□□□□□ -0.94
SOX6-208ENST00000527619 MVPQ14764 893 aaKnown RBP9.15□□□□□ -0.94
SOX6-208ENST00000527619 ZCCHC11Q5TAX3 1644 aaKnown RBP9.15□□□□□ -0.94
SOX6-208ENST00000527619 A2MP01023 1474 aa9.15□□□□□ -0.94
SOX6-208ENST00000527619 TTC36A6NLP5 189 aa9.15□□□□□ -0.95
SOX6-208ENST00000527619 PRIM1P49642 420 aaKnown RBP9.15□□□□□ -0.95
SOX6-208ENST00000527619 HMGN5P82970 282 aaKnown RBP9.15□□□□□ -0.95
SOX6-208ENST00000527619 SHANK2Q9UPX8 1470 aa9.15□□□□□ -0.95
SOX6-208ENST00000527619 RNF17Q9BXT8 1623 aaKnown RBP9.14□□□□□ -0.95
SOX6-208ENST00000527619 HDAC1Q13547 482 aaPredicted RBP9.14□□□□□ -0.95
SOX6-208ENST00000527619 MCTP1Q6DN14 999 aa9.14□□□□□ -0.95
SOX6-208ENST00000527619 GPATCH8Q9UKJ3 1502 aaKnown RBP9.14□□□□□ -0.95
SOX6-208ENST00000527619 CCDC141Q6ZP82 1450 aa9.14□□□□□ -0.95
SOX6-208ENST00000527619 EP400NLQ6ZTU2 488 aa9.14□□□□□ -0.95
SOX6-208ENST00000527619 KIF2CQ99661 725 aa9.14□□□□□ -0.95
SOX6-208ENST00000527619 GPBP1L1Q9HC44 474 aaPredicted RBP9.14□□□□□ -0.95
SOX6-208ENST00000527619 LMBRD1Q9NUN5 540 aa9.14□□□□□ -0.95
SOX6-208ENST00000527619 CD2BP2O95400 341 aaKnown RBP9.13□□□□□ -0.95
SOX6-208ENST00000527619 MKRN3Q13064 507 aaKnown RBP9.13□□□□□ -0.95
SOX6-208ENST00000527619 ATP2B3Q16720 1220 aa9.13□□□□□ -0.95
SOX6-208ENST00000527619 TMCO4Q5TGY1 634 aa9.13□□□□□ -0.95
SOX6-208ENST00000527619 ZBTB9Q96C00 473 aa9.13□□□□□ -0.95
SOX6-208ENST00000527619 LRSAM1Q6UWE0 723 aa9.13□□□□□ -0.95
SOX6-208ENST00000527619 GAS2L2Q8NHY3 880 aa9.13□□□□□ -0.95
SOX6-208ENST00000527619 LOC102724159A0A0B4J2E5 919 aa9.12□□□□□ -0.95
SOX6-208ENST00000527619 KCNJ4P48050 445 aa9.12□□□□□ -0.95
SOX6-208ENST00000527619 PWP2Q15269 919 aaKnown RBP9.12□□□□□ -0.95
SOX6-208ENST00000527619 ZNF777Q9ULD5 760 aaPredicted RBP9.12□□□□□ -0.95
SOX6-208ENST00000527619 TROQ12816 1431 aaPredicted RBP9.12□□□□□ -0.95
SOX6-208ENST00000527619 C9orf84Q5VXU9 1444 aa9.12□□□□□ -0.95
SOX6-208ENST00000527619 GOLIM4O00461 696 aa9.12□□□□□ -0.95
SOX6-208ENST00000527619 NUCB2P80303 420 aa9.12□□□□□ -0.95
SOX6-208ENST00000527619 RGL3Q3MIN7 710 aa9.12□□□□□ -0.95
SOX6-208ENST00000527619 CDC42BPAQ5VT25 1732 aa9.12□□□□□ -0.95
SOX6-208ENST00000527619 AK9Q5TCS8 1911 aa9.12□□□□□ -0.95
SOX6-208ENST00000527619 MYOM1P52179 1685 aa9.11□□□□□ -0.95
SOX6-208ENST00000527619 TMTC2Q8N394 836 aa9.11□□□□□ -0.95
SOX6-208ENST00000527619 BCL2L13Q9BXK5 485 aa9.11□□□□□ -0.95
SOX6-208ENST00000527619 SATB1Q01826 763 aa9.11□□□□□ -0.95
SOX6-208ENST00000527619 JARID2Q92833 1246 aaPredicted RBP9.11□□□□□ -0.95
SOX6-208ENST00000527619 SGSM3Q96HU1 749 aa9.11□□□□□ -0.95
SOX6-208ENST00000527619 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.11□□□□□ -0.95
SOX6-208ENST00000527619 KIF16BQ96L93 1317 aa9.1□□□□□ -0.95
SOX6-208ENST00000527619 ZKSCAN2Q63HK3 967 aa9.1□□□□□ -0.95
SOX6-208ENST00000527619 DZIP1LQ8IYY4 767 aaKnown RBP9.1□□□□□ -0.95
SOX6-208ENST00000527619 TSC1Q92574 1164 aa9.1□□□□□ -0.95
SOX6-208ENST00000527619 KIF3AQ9Y496 699 aa9.1□□□□□ -0.95
SOX6-208ENST00000527619 IQGAP1P46940 1657 aa9.1□□□□□ -0.95
SOX6-208ENST00000527619 MAP2K1Q02750 393 aaPredicted RBP9.1□□□□□ -0.95
SOX6-208ENST00000527619 NBPF9Q3BBW0 867 aa9.1□□□□□ -0.95
SOX6-208ENST00000527619 FOXD4L6Q3SYB3 417 aaPredicted RBP9.1□□□□□ -0.95
SOX6-208ENST00000527619 FOXD4L3Q6VB84 417 aaPredicted RBP9.1□□□□□ -0.95
SOX6-208ENST00000527619 WDR63Q8IWG1 891 aa9.1□□□□□ -0.95
SOX6-208ENST00000527619 CFAP74Q9C0B2 1584 aa9.1□□□□□ -0.95
SOX6-208ENST00000527619 CYP2E1P05181 493 aaPredicted RBP9.09□□□□□ -0.95
SOX6-208ENST00000527619 PDCL2Q8N4E4 241 aa9.09□□□□□ -0.95
SOX6-208ENST00000527619 GPT2Q8TD30 523 aa9.09□□□□□ -0.95
SOX6-208ENST00000527619 PIBF1Q8WXW3 757 aa9.09□□□□□ -0.95
SOX6-208ENST00000527619 TSPYL1Q9H0U9 437 aa9.09□□□□□ -0.95
SOX6-208ENST00000527619 RBM27Q9P2N5 1060 aaKnown RBP9.09□□□□□ -0.95
SOX6-208ENST00000527619 TRIM6-TRIM34B2RNG4 842 aa9.09□□□□□ -0.95
SOX6-208ENST00000527619 TRIM34Q9BYJ4 488 aa9.09□□□□□ -0.95
SOX6-208ENST00000527619 KANK1Q14678 1352 aa9.09□□□□□ -0.95
SOX6-208ENST00000527619 IQSEC2Q5JU85 1478 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 BMP2KLQ5H9B9 411 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 RBM42Q9BTD8 480 aaKnown RBP9.08□□□□□ -0.96
SOX6-208ENST00000527619 BCL2L12Q9HB09 334 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 SYCE3A1L190 88 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 SPDYE4A6NLX3 237 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 PRPF40AO75400 957 aaKnown RBP9.08□□□□□ -0.96
SOX6-208ENST00000527619 NUCB1Q02818 461 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 EFCC1Q9HA90 598 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 DDX19BQ9UMR2 479 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 DIP2BQ9P265 1576 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 POLR3AO14802 1390 aaPredicted RBP9.08□□□□□ -0.96
SOX6-208ENST00000527619 NOLC1Q14978 699 aaKnown RBP eCLIP9.08□□□□□ -0.96
SOX6-208ENST00000527619 ZNF771Q7L3S4 317 aaPredicted RBP9.08□□□□□ -0.96
SOX6-208ENST00000527619 RAI14Q9P0K7 980 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 TMEM63CQ9P1W3 806 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 CEP83Q9Y592 693 aa9.08□□□□□ -0.96
SOX6-208ENST00000527619 RUNDC1Q96C34 613 aa9.07□□□□□ -0.96
SOX6-208ENST00000527619 STK26Q9P289 416 aa9.07□□□□□ -0.96
SOX6-208ENST00000527619 SHPRHQ149N8 1683 aa9.07□□□□□ -0.96
SOX6-208ENST00000527619 PLA2R1Q13018 1463 aa9.07□□□□□ -0.96
SOX6-208ENST00000527619 KIF13AQ9H1H9 1805 aa9.07□□□□□ -0.96
SOX6-208ENST00000527619 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms