RNA–Protein interactions for RNA: ENST00000527224.1

PACS1-205, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 3,024 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-205ENST00000527224 ATP10BO94823 1461 aa22.59■■□□□ 1.21
PACS1-205ENST00000527224 ADGRL2O95490 1459 aa22.59■■□□□ 1.21
PACS1-205ENST00000527224 WDR63Q8IWG1 891 aa22.58■■□□□ 1.21
PACS1-205ENST00000527224 CTIFO43310 598 aaKnown RBP22.58■■□□□ 1.21
PACS1-205ENST00000527224 PTPRGP23470 1445 aa22.58■■□□□ 1.2
PACS1-205ENST00000527224 CDC45O75419 566 aa22.57■■□□□ 1.2
PACS1-205ENST00000527224 KIAA1524Q8TCG1 905 aa22.57■■□□□ 1.2
PACS1-205ENST00000527224 C16orf45Q96MC5 204 aaPredicted RBP22.56■■□□□ 1.2
PACS1-205ENST00000527224 DDX41Q9UJV9 622 aaKnown RBP22.56■■□□□ 1.2
PACS1-205ENST00000527224 GSPT1P15170 499 aaKnown RBP22.55■■□□□ 1.2
PACS1-205ENST00000527224 SECISBP2LQ93073 1101 aaKnown RBP22.55■■□□□ 1.2
PACS1-205ENST00000527224 CWC22Q9HCG8 908 aaKnown RBP22.55■■□□□ 1.2
PACS1-205ENST00000527224 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.55■■□□□ 1.2
PACS1-205ENST00000527224 V9GYY5 206 aaPredicted RBP22.55■■□□□ 1.2
PACS1-205ENST00000527224 SHROOM2Q13796 1616 aa22.55■■□□□ 1.2
PACS1-205ENST00000527224 C9orf84Q5VXU9 1444 aa22.54■■□□□ 1.2
PACS1-205ENST00000527224 ABCC10Q5T3U5 1492 aa22.53■■□□□ 1.2
PACS1-205ENST00000527224 AP5Z1O43299 807 aa22.52■■□□□ 1.2
PACS1-205ENST00000527224 ST18O60284 1047 aa22.52■■□□□ 1.2
PACS1-205ENST00000527224 SYAP1Q96A49 352 aaPredicted RBP22.52■■□□□ 1.19
PACS1-205ENST00000527224 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.19
PACS1-205ENST00000527224 U2SURPO15042 1029 aaKnown RBP22.51■■□□□ 1.19
PACS1-205ENST00000527224 RGS22Q8NE09 1264 aa22.51■■□□□ 1.19
PACS1-205ENST00000527224 USP26Q9BXU7 913 aa22.51■■□□□ 1.19
PACS1-205ENST00000527224 KIF18AQ8NI77 898 aa22.51■■□□□ 1.19
PACS1-205ENST00000527224 ADCY10Q96PN6 1610 aa22.5■■□□□ 1.19
PACS1-205ENST00000527224 MORC1Q86VD1 984 aa22.49■■□□□ 1.19
PACS1-205ENST00000527224 PLA2R1Q13018 1463 aa22.49■■□□□ 1.19
PACS1-205ENST00000527224 U2AF1L5P0DN76 240 aaPredicted RBP22.49■■□□□ 1.19
PACS1-205ENST00000527224 U2AF1Q01081 240 aaKnown RBP eCLIP22.49■■□□□ 1.19
PACS1-205ENST00000527224 TMX1Q9H3N1 280 aa22.49■■□□□ 1.19
PACS1-205ENST00000527224 ITSN2Q9NZM3 1697 aa22.48■■□□□ 1.19
PACS1-205ENST00000527224 ZNF592Q92610 1267 aa22.48■■□□□ 1.19
PACS1-205ENST00000527224 C16orf71Q8IYS4 520 aaPredicted RBP22.48■■□□□ 1.19
PACS1-205ENST00000527224 KRT222Q8N1A0 295 aa22.48■■□□□ 1.19
PACS1-205ENST00000527224 USP48Q86UV5 1035 aa22.47■■□□□ 1.19
PACS1-205ENST00000527224 MORC2Q9Y6X9 1032 aaPredicted RBP22.47■■□□□ 1.19
PACS1-205ENST00000527224 CFAP74Q9C0B2 1584 aa22.47■■□□□ 1.19
PACS1-205ENST00000527224 KDM4AO75164 1064 aa22.47■■□□□ 1.19
PACS1-205ENST00000527224 SLC20A2Q08357 652 aa22.47■■□□□ 1.19
PACS1-205ENST00000527224 APBB1O00213 710 aa22.47■■□□□ 1.19
PACS1-205ENST00000527224 TULP2O00295 520 aa22.47■■□□□ 1.19
PACS1-205ENST00000527224 CALCOCO1Q9P1Z2 691 aa22.47■■□□□ 1.19
PACS1-205ENST00000527224 NPC1L1Q9UHC9 1359 aa22.47■■□□□ 1.19
PACS1-205ENST00000527224 ABCA8O94911 1581 aa22.46■■□□□ 1.19
PACS1-205ENST00000527224 PTGS1P23219 599 aa22.46■■□□□ 1.19
PACS1-205ENST00000527224 PPIP5K1Q6PFW1 1433 aa22.46■■□□□ 1.19
PACS1-205ENST00000527224 NPHP1O15259 732 aa22.46■■□□□ 1.19
PACS1-205ENST00000527224 PHF14O94880 888 aa22.46■■□□□ 1.19
PACS1-205ENST00000527224 MTHFSP49914 203 aa22.45■■□□□ 1.18
PACS1-205ENST00000527224 LRMPQ12912 555 aa22.45■■□□□ 1.18
PACS1-205ENST00000527224 MLECQ14165 292 aa22.45■■□□□ 1.18
PACS1-205ENST00000527224 SYNMO15061 1565 aa22.45■■□□□ 1.18
PACS1-205ENST00000527224 POLR3AO14802 1390 aaPredicted RBP22.45■■□□□ 1.18
PACS1-205ENST00000527224 FAM184AQ8NB25 1140 aa22.45■■□□□ 1.18
PACS1-205ENST00000527224 IFT57Q9NWB7 429 aa22.45■■□□□ 1.18
PACS1-205ENST00000527224 SRPK2P78362 688 aaKnown RBP22.44■■□□□ 1.18
PACS1-205ENST00000527224 NEK4P51957 841 aa22.44■■□□□ 1.18
PACS1-205ENST00000527224 UVSSAQ2YD98 709 aa22.44■■□□□ 1.18
PACS1-205ENST00000527224 TEX2Q8IWB9 1127 aa22.44■■□□□ 1.18
PACS1-205ENST00000527224 RTF1Q92541 710 aaKnown RBP22.44■■□□□ 1.18
PACS1-205ENST00000527224 TMX3Q96JJ7 454 aa22.44■■□□□ 1.18
PACS1-205ENST00000527224 HNRNPH2P55795 449 aaKnown RBP22.44■■□□□ 1.18
PACS1-205ENST00000527224 KMT5BQ4FZB7 885 aa22.44■■□□□ 1.18
PACS1-205ENST00000527224 GIMAP6Q6P9H5 292 aa22.44■■□□□ 1.18
PACS1-205ENST00000527224 OTUD7AQ8TE49 926 aaPredicted RBP22.44■■□□□ 1.18
PACS1-205ENST00000527224 SIRT2Q8IXJ6 389 aa22.43■■□□□ 1.18
PACS1-205ENST00000527224 BRD1O95696 1058 aa22.43■■□□□ 1.18
PACS1-205ENST00000527224 FEZ2Q9UHY8 353 aaPredicted RBP22.43■■□□□ 1.18
PACS1-205ENST00000527224 TNNT3P45378 269 aaPredicted RBP22.42■■□□□ 1.18
PACS1-205ENST00000527224 CROCC2H7BZ55 1655 aa22.42■■□□□ 1.18
PACS1-205ENST00000527224 CDC42BPAQ5VT25 1732 aa22.42■■□□□ 1.18
PACS1-205ENST00000527224 TNNT1P13805 278 aa22.42■■□□□ 1.18
PACS1-205ENST00000527224 IQSEC2Q5JU85 1478 aa22.42■■□□□ 1.18
PACS1-205ENST00000527224 CCDC141Q6ZP82 1450 aa22.42■■□□□ 1.18
PACS1-205ENST00000527224 CCDC112Q8NEF3 446 aa22.41■■□□□ 1.18
PACS1-205ENST00000527224 GCC1Q96CN9 775 aa22.41■■□□□ 1.18
PACS1-205ENST00000527224 PLEKHM2Q8IWE5 1019 aa22.4■■□□□ 1.18
PACS1-205ENST00000527224 ANKRD36BQ8N2N9 1353 aa22.4■■□□□ 1.18
PACS1-205ENST00000527224 DTNBO60941 627 aa22.4■■□□□ 1.18
PACS1-205ENST00000527224 LAMC1P11047 1609 aa22.39■■□□□ 1.18
PACS1-205ENST00000527224 RAD51AP2Q09MP3 1159 aa22.39■■□□□ 1.17
PACS1-205ENST00000527224 ATAD2Q6PL18 1390 aa22.38■■□□□ 1.17
PACS1-205ENST00000527224 KLHL34Q8N239 644 aa22.38■■□□□ 1.17
PACS1-205ENST00000527224 SMTNL1A8MU46 457 aa22.38■■□□□ 1.17
PACS1-205ENST00000527224 CNPY2Q9Y2B0 182 aa22.38■■□□□ 1.17
PACS1-205ENST00000527224 CCDC27Q2M243 656 aa22.37■■□□□ 1.17
PACS1-205ENST00000527224 CCDC183Q5T5S1 534 aa22.37■■□□□ 1.17
PACS1-205ENST00000527224 GTF3C6Q969F1 213 aa22.37■■□□□ 1.17
PACS1-205ENST00000527224 NRBP1Q9UHY1 535 aa22.37■■□□□ 1.17
PACS1-205ENST00000527224 IPO8O15397 1037 aaKnown RBP22.36■■□□□ 1.17
PACS1-205ENST00000527224 RBM6P78332 1123 aaKnown RBP22.36■■□□□ 1.17
PACS1-205ENST00000527224 INTS3Q68E01 1043 aaKnown RBP22.36■■□□□ 1.17
PACS1-205ENST00000527224 ZBTB7BO15156 539 aaPredicted RBP22.36■■□□□ 1.17
PACS1-205ENST00000527224 CCDC186Q7Z3E2 898 aa22.36■■□□□ 1.17
PACS1-205ENST00000527224 RSPH14Q9UHP6 348 aa22.36■■□□□ 1.17
PACS1-205ENST00000527224 MYOM1P52179 1685 aa22.36■■□□□ 1.17
PACS1-205ENST00000527224 MYO5CQ9NQX4 1742 aa22.36■■□□□ 1.17
PACS1-205ENST00000527224 SPAG9O60271 1321 aaKnown RBP22.36■■□□□ 1.17
PACS1-205ENST00000527224 FBXO38Q6PIJ6 1188 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms