RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 TTC21BQ7Z4L5 1316 aa26.91■■□□□ 1.9
CAPN1-206ENST00000526966 WDR17Q8IZU2 1322 aa26.91■■□□□ 1.9
CAPN1-206ENST00000526966 ZNF692Q9BU19 519 aaPredicted RBP26.91■■□□□ 1.9
CAPN1-206ENST00000526966 AXIN2Q9Y2T1 843 aa26.91■■□□□ 1.9
CAPN1-206ENST00000526966 NFAT5O94916 1531 aa26.9■■□□□ 1.9
CAPN1-206ENST00000526966 NBPF14Q5TI25 921 aa26.9■■□□□ 1.9
CAPN1-206ENST00000526966 DDB1Q16531 1140 aa26.89■■□□□ 1.9
CAPN1-206ENST00000526966 TOM1L2Q6ZVM7 507 aa26.89■■□□□ 1.9
CAPN1-206ENST00000526966 ARHGEF25Q86VW2 580 aa26.89■■□□□ 1.9
CAPN1-206ENST00000526966 TTC21AQ8NDW8 1320 aa26.89■■□□□ 1.89
CAPN1-206ENST00000526966 KCNH5Q8NCM2 988 aa26.88■■□□□ 1.89
CAPN1-206ENST00000526966 ABCC6O95255 1503 aa26.88■■□□□ 1.89
CAPN1-206ENST00000526966 USP54Q70EL1 1684 aa26.88■■□□□ 1.89
CAPN1-206ENST00000526966 BCL9O00512 1426 aa26.87■■□□□ 1.89
CAPN1-206ENST00000526966 SBNO2Q9Y2G9 1366 aa26.85■■□□□ 1.89
CAPN1-206ENST00000526966 PLSCR1O15162 318 aa26.85■■□□□ 1.89
CAPN1-206ENST00000526966 CDCA7Q9BWT1 371 aaPredicted RBP26.85■■□□□ 1.89
CAPN1-206ENST00000526966 KTN1Q86UP2 1357 aaKnown RBP26.83■■□□□ 1.88
CAPN1-206ENST00000526966 NEUROD1Q13562 356 aa26.82■■□□□ 1.88
CAPN1-206ENST00000526966 CARD10Q9BWT7 1032 aa26.82■■□□□ 1.88
CAPN1-206ENST00000526966 CASZ1Q86V15 1759 aa26.81■■□□□ 1.88
CAPN1-206ENST00000526966 MARCH10Q8NA82 808 aaPredicted RBP26.81■■□□□ 1.88
CAPN1-206ENST00000526966 BCL11BQ9C0K0 894 aaPredicted RBP26.81■■□□□ 1.88
CAPN1-206ENST00000526966 PTF1AQ7RTS3 328 aa26.79■■□□□ 1.88
CAPN1-206ENST00000526966 CD163L1Q9NR16 1453 aa26.79■■□□□ 1.88
CAPN1-206ENST00000526966 SOX12O15370 315 aa26.78■■□□□ 1.88
CAPN1-206ENST00000526966 USP31Q70CQ4 1352 aa26.78■■□□□ 1.88
CAPN1-206ENST00000526966 CCDC7Q96M83 1385 aa26.78■■□□□ 1.88
CAPN1-206ENST00000526966 LTN1O94822 1766 aa26.78■■□□□ 1.88
CAPN1-206ENST00000526966 SPON1Q9HCB6 807 aa26.77■■□□□ 1.88
CAPN1-206ENST00000526966 TNS2Q63HR2 1409 aa26.76■■□□□ 1.87
CAPN1-206ENST00000526966 KCNQ2O43526 872 aa26.76■■□□□ 1.87
CAPN1-206ENST00000526966 CSB-PGBD3P0DP91 1061 aa26.76■■□□□ 1.87
CAPN1-206ENST00000526966 ANO8Q9HCE9 1232 aaPredicted RBP26.76■■□□□ 1.87
CAPN1-206ENST00000526966 NHSQ6T4R5 1651 aa26.73■■□□□ 1.87
CAPN1-206ENST00000526966 PROM2Q8N271 834 aa26.73■■□□□ 1.87
CAPN1-206ENST00000526966 NINLQ9Y2I6 1382 aa26.72■■□□□ 1.87
CAPN1-206ENST00000526966 ERBB3P21860 1342 aa26.7■■□□□ 1.87
CAPN1-206ENST00000526966 EXOC5O00471 708 aa26.7■■□□□ 1.86
CAPN1-206ENST00000526966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.69■■□□□ 1.86
CAPN1-206ENST00000526966 CARD11Q9BXL7 1154 aa26.69■■□□□ 1.86
CAPN1-206ENST00000526966 PPP1R1BQ9UD71 204 aaPredicted RBP26.69■■□□□ 1.86
CAPN1-206ENST00000526966 NME9Q86XW9 330 aa26.68■■□□□ 1.86
CAPN1-206ENST00000526966 EDC4Q6P2E9 1401 aaKnown RBP26.67■■□□□ 1.86
CAPN1-206ENST00000526966 TXNRD1Q16881 649 aa26.65■■□□□ 1.86
CAPN1-206ENST00000526966 PDGFDQ9GZP0 370 aaPredicted RBP26.64■■□□□ 1.86
CAPN1-206ENST00000526966 MYOM1P52179 1685 aa26.63■■□□□ 1.85
CAPN1-206ENST00000526966 A0A1W2PP64 1363 aa26.63■■□□□ 1.85
CAPN1-206ENST00000526966 HDGFL2Q7Z4V5 671 aaPredicted RBP26.63■■□□□ 1.85
CAPN1-206ENST00000526966 BTAF1O14981 1849 aa26.62■■□□□ 1.85
CAPN1-206ENST00000526966 PAPPAQ13219 1627 aa26.62■■□□□ 1.85
CAPN1-206ENST00000526966 TMC1Q8TDI8 760 aa26.62■■□□□ 1.85
CAPN1-206ENST00000526966 SLC12A5Q9H2X9 1139 aa26.62■■□□□ 1.85
CAPN1-206ENST00000526966 FAM208AQ9UK61 1670 aaKnown RBP26.62■■□□□ 1.85
CAPN1-206ENST00000526966 PUS7Q96PZ0 661 aaKnown RBP26.61■■□□□ 1.85
CAPN1-206ENST00000526966 NLRP2Q9NX02 1062 aa26.61■■□□□ 1.85
CAPN1-206ENST00000526966 IL2RBP14784 551 aa26.6■■□□□ 1.85
CAPN1-206ENST00000526966 KAT6BQ8WYB5 2073 aa26.6■■□□□ 1.85
CAPN1-206ENST00000526966 SLC15A2Q16348 729 aa26.59■■□□□ 1.85
CAPN1-206ENST00000526966 ANKRD24Q8TF21 1146 aa26.59■■□□□ 1.85
CAPN1-206ENST00000526966 STK32BQ9NY57 414 aa26.59■■□□□ 1.85
CAPN1-206ENST00000526966 TONSLQ96HA7 1378 aa26.58■■□□□ 1.85
CAPN1-206ENST00000526966 YY1P25490 414 aa26.58■■□□□ 1.85
CAPN1-206ENST00000526966 TERF2IPQ9NYB0 399 aa26.58■■□□□ 1.85
CAPN1-206ENST00000526966 ZBTB7AO95365 584 aa26.57■■□□□ 1.84
CAPN1-206ENST00000526966 PTGER2P43116 358 aa26.57■■□□□ 1.84
CAPN1-206ENST00000526966 ACSBG1Q96GR2 724 aa26.55■■□□□ 1.84
CAPN1-206ENST00000526966 DCAF8L1A6NGE4 600 aa26.53■■□□□ 1.84
CAPN1-206ENST00000526966 TESK2Q96S53 571 aa26.52■■□□□ 1.84
CAPN1-206ENST00000526966 IP6K1Q92551 441 aa26.51■■□□□ 1.83
CAPN1-206ENST00000526966 ATF5Q9Y2D1 282 aaPredicted RBP26.51■■□□□ 1.83
CAPN1-206ENST00000526966 SGIP1Q9BQI5 828 aa26.5■■□□□ 1.83
CAPN1-206ENST00000526966 MTFR1LQ9H019 292 aa26.5■■□□□ 1.83
CAPN1-206ENST00000526966 RGPD2P0DJD1 1756 aa26.49■■□□□ 1.83
CAPN1-206ENST00000526966 QSER1Q2KHR3 1735 aa26.49■■□□□ 1.83
CAPN1-206ENST00000526966 SHANK3Q9BYB0 1731 aa26.48■■□□□ 1.83
CAPN1-206ENST00000526966 UTRNP46939 3433 aa26.46■■□□□ 1.83
CAPN1-206ENST00000526966 DOT1LQ8TEK3 1739 aa26.45■■□□□ 1.83
CAPN1-206ENST00000526966 ST20-MTHFSA0A0A6YYL1 179 aa26.45■■□□□ 1.82
CAPN1-206ENST00000526966 MAP3K19Q56UN5 1328 aa26.44■■□□□ 1.82
CAPN1-206ENST00000526966 LRRC4BQ9NT99 713 aa26.44■■□□□ 1.82
CAPN1-206ENST00000526966 COL24A1Q17RW2 1714 aa26.43■■□□□ 1.82
CAPN1-206ENST00000526966 SLC24A1O60721 1099 aa26.43■■□□□ 1.82
CAPN1-206ENST00000526966 ZNF827Q17R98 1081 aa26.43■■□□□ 1.82
CAPN1-206ENST00000526966 COG3Q96JB2 828 aa26.43■■□□□ 1.82
CAPN1-206ENST00000526966 SYT17Q9BSW7 474 aa26.43■■□□□ 1.82
CAPN1-206ENST00000526966 FHDC1Q9C0D6 1143 aaPredicted RBP26.43■■□□□ 1.82
CAPN1-206ENST00000526966 ANKRD36BQ8N2N9 1353 aa26.43■■□□□ 1.82
CAPN1-206ENST00000526966 LY75O60449 1722 aa26.42■■□□□ 1.82
CAPN1-206ENST00000526966 TUBGCP6Q96RT7 1819 aa26.42■■□□□ 1.82
CAPN1-206ENST00000526966 HOXC9P31274 260 aa26.42■■□□□ 1.82
CAPN1-206ENST00000526966 CHD4Q14839 1912 aa26.41■■□□□ 1.82
CAPN1-206ENST00000526966 LTV1Q96GA3 475 aaPredicted RBP26.41■■□□□ 1.82
CAPN1-206ENST00000526966 RTL1A6NKG5 1358 aa26.4■■□□□ 1.82
CAPN1-206ENST00000526966 MAP3K5Q99683 1374 aa26.4■■□□□ 1.82
CAPN1-206ENST00000526966 DDX54Q8TDD1 881 aaKnown RBP26.39■■□□□ 1.82
CAPN1-206ENST00000526966 MEGF6O75095 1541 aa26.39■■□□□ 1.81
CAPN1-206ENST00000526966 SLC27A3Q5K4L6 730 aa26.38■■□□□ 1.81
CAPN1-206ENST00000526966 AKT1S1Q96B36 256 aa26.38■■□□□ 1.81
CAPN1-206ENST00000526966 FBLN1P23142 703 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms