RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 FHDC1Q9C0D6 1143 aaPredicted RBP28.67■■■□□ 2.18
AMBRA1-205ENST00000526606 COL18A1P39060 1754 aa28.67■■■□□ 2.18
AMBRA1-205ENST00000526606 BCL9O00512 1426 aa28.67■■■□□ 2.18
AMBRA1-205ENST00000526606 SGIP1Q9BQI5 828 aa28.66■■■□□ 2.18
AMBRA1-205ENST00000526606 PPIP5K1Q6PFW1 1433 aa28.66■■■□□ 2.18
AMBRA1-205ENST00000526606 TXNRD1Q16881 649 aa28.65■■■□□ 2.18
AMBRA1-205ENST00000526606 TOM1L2Q6ZVM7 507 aa28.65■■■□□ 2.18
AMBRA1-205ENST00000526606 NLRP6P59044 892 aa28.63■■■□□ 2.17
AMBRA1-205ENST00000526606 SLC15A2Q16348 729 aa28.63■■■□□ 2.17
AMBRA1-205ENST00000526606 CABP2Q9NPB3 220 aa28.63■■■□□ 2.17
AMBRA1-205ENST00000526606 SLIT3O75094 1523 aa28.63■■■□□ 2.17
AMBRA1-205ENST00000526606 NBPF1Q3BBV0 1214 aa28.62■■■□□ 2.17
AMBRA1-205ENST00000526606 GOLGB1Q14789 3259 aaKnown RBP28.61■■■□□ 2.17
AMBRA1-205ENST00000526606 WDR17Q8IZU2 1322 aa28.61■■■□□ 2.17
AMBRA1-205ENST00000526606 WNK3Q9BYP7 1800 aa28.6■■■□□ 2.17
AMBRA1-205ENST00000526606 SRPK2P78362 688 aaKnown RBP28.6■■■□□ 2.17
AMBRA1-205ENST00000526606 STK32BQ9NY57 414 aa28.6■■■□□ 2.17
AMBRA1-205ENST00000526606 BRD4O60885 1362 aaPredicted RBP28.6■■■□□ 2.17
AMBRA1-205ENST00000526606 C1QTNF8P60827 252 aa28.59■■■□□ 2.17
AMBRA1-205ENST00000526606 CHD4Q14839 1912 aa28.59■■■□□ 2.17
AMBRA1-205ENST00000526606 SENP3-EIF4A1A0A087X0R7 540 aa28.58■■■□□ 2.17
AMBRA1-205ENST00000526606 CABP1Q9NZU7 370 aa28.58■■■□□ 2.17
AMBRA1-205ENST00000526606 USP6P35125 1406 aa28.58■■■□□ 2.17
AMBRA1-205ENST00000526606 CEP350Q5VT06 3117 aa28.58■■■□□ 2.17
AMBRA1-205ENST00000526606 CDCA7Q9BWT1 371 aaPredicted RBP28.57■■■□□ 2.16
AMBRA1-205ENST00000526606 MTFR1LQ9H019 292 aa28.57■■■□□ 2.16
AMBRA1-205ENST00000526606 AKAP12Q02952 1782 aa28.56■■■□□ 2.16
AMBRA1-205ENST00000526606 ARHGEF25Q86VW2 580 aa28.54■■■□□ 2.16
AMBRA1-205ENST00000526606 KIAA1210Q9ULL0 1709 aa28.54■■■□□ 2.16
AMBRA1-205ENST00000526606 RGPD5Q99666 1765 aa28.53■■■□□ 2.16
AMBRA1-205ENST00000526606 CARD10Q9BWT7 1032 aa28.53■■■□□ 2.16
AMBRA1-205ENST00000526606 PIK3C2AO00443 1686 aa28.53■■■□□ 2.16
AMBRA1-205ENST00000526606 CPSF1Q10570 1443 aaKnown RBP28.51■■■□□ 2.15
AMBRA1-205ENST00000526606 CENPJQ9HC77 1338 aaPredicted RBP28.5■■■□□ 2.15
AMBRA1-205ENST00000526606 EXOC5O00471 708 aa28.5■■■□□ 2.15
AMBRA1-205ENST00000526606 ARXQ96QS3 562 aa28.5■■■□□ 2.15
AMBRA1-205ENST00000526606 MAP3K5Q99683 1374 aa28.47■■■□□ 2.15
AMBRA1-205ENST00000526606 PAPPAQ13219 1627 aa28.44■■■□□ 2.14
AMBRA1-205ENST00000526606 CSB-PGBD3P0DP91 1061 aa28.43■■■□□ 2.14
AMBRA1-205ENST00000526606 ACSBG1Q96GR2 724 aa28.43■■■□□ 2.14
AMBRA1-205ENST00000526606 TTC21BQ7Z4L5 1316 aa28.43■■■□□ 2.14
AMBRA1-205ENST00000526606 ZNF827Q17R98 1081 aa28.42■■■□□ 2.14
AMBRA1-205ENST00000526606 IFFO2Q5TF58 517 aa28.42■■■□□ 2.14
AMBRA1-205ENST00000526606 NHSQ6T4R5 1651 aa28.42■■■□□ 2.14
AMBRA1-205ENST00000526606 SOX12O15370 315 aa28.41■■■□□ 2.14
AMBRA1-205ENST00000526606 KCNH5Q8NCM2 988 aa28.41■■■□□ 2.14
AMBRA1-205ENST00000526606 TNS2Q63HR2 1409 aa28.41■■■□□ 2.14
AMBRA1-205ENST00000526606 QRICH2Q9H0J4 1663 aa28.41■■■□□ 2.14
AMBRA1-205ENST00000526606 TRPM1Q7Z4N2 1603 aa28.4■■■□□ 2.14
AMBRA1-205ENST00000526606 LRRC4BQ9NT99 713 aa28.4■■■□□ 2.14
AMBRA1-205ENST00000526606 CCDC7Q96M83 1385 aa28.38■■■□□ 2.13
AMBRA1-205ENST00000526606 NFAT5O94916 1531 aa28.38■■■□□ 2.13
AMBRA1-205ENST00000526606 GPR162Q16538 588 aa28.37■■■□□ 2.13
AMBRA1-205ENST00000526606 ZNF692Q9BU19 519 aaPredicted RBP28.35■■■□□ 2.13
AMBRA1-205ENST00000526606 BTAF1O14981 1849 aa28.34■■■□□ 2.13
AMBRA1-205ENST00000526606 AKT1S1Q96B36 256 aa28.33■■■□□ 2.13
AMBRA1-205ENST00000526606 ABCC6O95255 1503 aa28.32■■■□□ 2.12
AMBRA1-205ENST00000526606 GIGYF1O75420 1035 aaPredicted RBP28.31■■■□□ 2.12
AMBRA1-205ENST00000526606 TTC21AQ8NDW8 1320 aa28.31■■■□□ 2.12
AMBRA1-205ENST00000526606 EVC2Q86UK5 1308 aa28.3■■■□□ 2.12
AMBRA1-205ENST00000526606 COL24A1Q17RW2 1714 aa28.29■■■□□ 2.12
AMBRA1-205ENST00000526606 SHANK3Q9BYB0 1731 aa28.27■■■□□ 2.12
AMBRA1-205ENST00000526606 KAT6BQ8WYB5 2073 aa28.27■■■□□ 2.12
AMBRA1-205ENST00000526606 NLGN2Q8NFZ4 835 aa28.27■■■□□ 2.12
AMBRA1-205ENST00000526606 SLC16A10Q8TF71 515 aa28.27■■■□□ 2.12
AMBRA1-205ENST00000526606 ERBB3P21860 1342 aa28.26■■■□□ 2.11
AMBRA1-205ENST00000526606 IL2RBP14784 551 aa28.26■■■□□ 2.11
AMBRA1-205ENST00000526606 NLRP2Q9NX02 1062 aa28.26■■■□□ 2.11
AMBRA1-205ENST00000526606 PNPLA7Q6ZV29 1317 aa28.25■■■□□ 2.11
AMBRA1-205ENST00000526606 KLHL34Q8N239 644 aa28.24■■■□□ 2.11
AMBRA1-205ENST00000526606 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
AMBRA1-205ENST00000526606 QSER1Q2KHR3 1735 aa28.23■■■□□ 2.11
AMBRA1-205ENST00000526606 KTN1Q86UP2 1357 aaKnown RBP28.22■■■□□ 2.11
AMBRA1-205ENST00000526606 KCNQ4P56696 695 aa28.21■■■□□ 2.11
AMBRA1-205ENST00000526606 USP31Q70CQ4 1352 aa28.21■■■□□ 2.11
AMBRA1-205ENST00000526606 YBX3P16989 372 aaKnown RBP eCLIP28.2■■■□□ 2.1
AMBRA1-205ENST00000526606 POLD1P28340 1107 aa28.2■■■□□ 2.1
AMBRA1-205ENST00000526606 SLC27A3Q5K4L6 730 aa28.19■■■□□ 2.1
AMBRA1-205ENST00000526606 TUBGCP6Q96RT7 1819 aa28.19■■■□□ 2.1
AMBRA1-205ENST00000526606 ANKRD24Q8TF21 1146 aa28.18■■■□□ 2.1
AMBRA1-205ENST00000526606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.17■■■□□ 2.12e-7■■■□□ 18.4
AMBRA1-205ENST00000526606 NME9Q86XW9 330 aa28.16■■■□□ 2.1
AMBRA1-205ENST00000526606 L3MBTL2Q969R5 705 aa28.15■■■□□ 2.1
AMBRA1-205ENST00000526606 TFCP2L1Q9NZI6 479 aa28.15■■■□□ 2.1
AMBRA1-205ENST00000526606 MON2Q7Z3U7 1717 aa28.15■■■□□ 2.1
AMBRA1-205ENST00000526606 LTN1O94822 1766 aa28.14■■■□□ 2.1
AMBRA1-205ENST00000526606 USP54Q70EL1 1684 aa28.14■■■□□ 2.1
AMBRA1-205ENST00000526606 DDX54Q8TDD1 881 aaKnown RBP28.13■■■□□ 2.09
AMBRA1-205ENST00000526606 SBNO2Q9Y2G9 1366 aa28.11■■■□□ 2.09
AMBRA1-205ENST00000526606 CD163L1Q9NR16 1453 aa28.11■■■□□ 2.09
AMBRA1-205ENST00000526606 GRIN3BO60391 1043 aa28.1■■■□□ 2.09
AMBRA1-205ENST00000526606 PRIM1P49642 420 aaKnown RBP28.1■■■□□ 2.09
AMBRA1-205ENST00000526606 NSD2O96028 1365 aa28.09■■■□□ 2.09
AMBRA1-205ENST00000526606 LY75O60449 1722 aa28.07■■■□□ 2.08
AMBRA1-205ENST00000526606 COL23A1Q86Y22 540 aaPredicted RBP28.06■■■□□ 2.08
AMBRA1-205ENST00000526606 ATP10DQ9P241 1426 aa28.06■■■□□ 2.08
AMBRA1-205ENST00000526606 ANKRD36BQ8N2N9 1353 aa28.05■■■□□ 2.08
AMBRA1-205ENST00000526606 SYTL4Q96C24 671 aaPredicted RBP28.05■■■□□ 2.08
AMBRA1-205ENST00000526606 IP6K1Q92551 441 aa28.04■■■□□ 2.08
AMBRA1-205ENST00000526606 ROCK2O75116 1388 aaKnown RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms