RNA–Protein interactions for RNA: ENST00000525945.1

GRAMD1B-205, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-205ENST00000525945 DDB1Q16531 1140 aa11.87□□□□□ -0.51
GRAMD1B-205ENST00000525945 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
GRAMD1B-205ENST00000525945 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
GRAMD1B-205ENST00000525945 SLIT3O75094 1523 aa11.86□□□□□ -0.51
GRAMD1B-205ENST00000525945 WNK3Q9BYP7 1800 aa11.86□□□□□ -0.51
GRAMD1B-205ENST00000525945 SRPK2P78362 688 aaKnown RBP11.86□□□□□ -0.51
GRAMD1B-205ENST00000525945 CDCA7Q9BWT1 371 aaPredicted RBP11.86□□□□□ -0.51
GRAMD1B-205ENST00000525945 BCL9O00512 1426 aa11.86□□□□□ -0.51
GRAMD1B-205ENST00000525945 AKAP12Q02952 1782 aa11.85□□□□□ -0.51
GRAMD1B-205ENST00000525945 TOM1L2Q6ZVM7 507 aa11.85□□□□□ -0.51
GRAMD1B-205ENST00000525945 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
GRAMD1B-205ENST00000525945 ZBTB7CA1YPR0 619 aa11.84□□□□□ -0.51
GRAMD1B-205ENST00000525945 NLRP6P59044 892 aa11.84□□□□□ -0.51
GRAMD1B-205ENST00000525945 USP6P35125 1406 aa11.84□□□□□ -0.51
GRAMD1B-205ENST00000525945 MYOM1P52179 1685 aa11.84□□□□□ -0.51
GRAMD1B-205ENST00000525945 QRICH2Q9H0J4 1663 aa11.83□□□□□ -0.52
GRAMD1B-205ENST00000525945 WDR17Q8IZU2 1322 aa11.83□□□□□ -0.52
GRAMD1B-205ENST00000525945 CENPJQ9HC77 1338 aaPredicted RBP11.83□□□□□ -0.52
GRAMD1B-205ENST00000525945 ZBTB7AO95365 584 aa11.82□□□□□ -0.52
GRAMD1B-205ENST00000525945 STK32BQ9NY57 414 aa11.82□□□□□ -0.52
GRAMD1B-205ENST00000525945 COL18A1P39060 1754 aa11.82□□□□□ -0.52
GRAMD1B-205ENST00000525945 PIK3C2AO00443 1686 aa11.81□□□□□ -0.52
GRAMD1B-205ENST00000525945 CPSF1Q10570 1443 aaKnown RBP11.81□□□□□ -0.52
GRAMD1B-205ENST00000525945 PTGER2P43116 358 aa11.81□□□□□ -0.52
GRAMD1B-205ENST00000525945 ZNF784Q8NCA9 323 aaPredicted RBP11.81□□□□□ -0.52
GRAMD1B-205ENST00000525945 CABP2Q9NPB3 220 aa11.81□□□□□ -0.52
GRAMD1B-205ENST00000525945 C1QBPQ07021 282 aaKnown RBP11.8□□□□□ -0.52
GRAMD1B-205ENST00000525945 SLC15A2Q16348 729 aa11.8□□□□□ -0.52
GRAMD1B-205ENST00000525945 TXNRD1Q16881 649 aa11.8□□□□□ -0.52
GRAMD1B-205ENST00000525945 PROM2Q8N271 834 aa11.8□□□□□ -0.52
GRAMD1B-205ENST00000525945 MARCH10Q8NA82 808 aaPredicted RBP11.8□□□□□ -0.52
GRAMD1B-205ENST00000525945 KCNH5Q8NCM2 988 aa11.8□□□□□ -0.52
GRAMD1B-205ENST00000525945 PDGFDQ9GZP0 370 aaPredicted RBP11.8□□□□□ -0.52
GRAMD1B-205ENST00000525945 MTFR1LQ9H019 292 aa11.8□□□□□ -0.52
GRAMD1B-205ENST00000525945 CABP1Q9NZU7 370 aa11.8□□□□□ -0.52
GRAMD1B-205ENST00000525945 PTF1AQ7RTS3 328 aa11.79□□□□□ -0.52
GRAMD1B-205ENST00000525945 SYT17Q9BSW7 474 aa11.79□□□□□ -0.52
GRAMD1B-205ENST00000525945 CARD10Q9BWT7 1032 aa11.79□□□□□ -0.52
GRAMD1B-205ENST00000525945 ATF5Q9Y2D1 282 aaPredicted RBP11.79□□□□□ -0.52
GRAMD1B-205ENST00000525945 ABCC6O95255 1503 aa11.79□□□□□ -0.52
GRAMD1B-205ENST00000525945 CCDC7Q96M83 1385 aa11.79□□□□□ -0.52
GRAMD1B-205ENST00000525945 EXOC5O00471 708 aa11.78□□□□□ -0.52
GRAMD1B-205ENST00000525945 CSB-PGBD3P0DP91 1061 aa11.78□□□□□ -0.52
GRAMD1B-205ENST00000525945 NBPF1Q3BBV0 1214 aa11.78□□□□□ -0.52
GRAMD1B-205ENST00000525945 FHDC1Q9C0D6 1143 aaPredicted RBP11.78□□□□□ -0.52
GRAMD1B-205ENST00000525945 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
GRAMD1B-205ENST00000525945 TRPM1Q7Z4N2 1603 aa11.78□□□□□ -0.52
GRAMD1B-205ENST00000525945 NHSQ6T4R5 1651 aa11.78□□□□□ -0.52
GRAMD1B-205ENST00000525945 TNS2Q63HR2 1409 aa11.77□□□□□ -0.52
GRAMD1B-205ENST00000525945 NPM3O75607 178 aaKnown RBP11.77□□□□□ -0.53
GRAMD1B-205ENST00000525945 ARHGEF25Q86VW2 580 aa11.77□□□□□ -0.53
GRAMD1B-205ENST00000525945 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.53
GRAMD1B-205ENST00000525945 EVC2Q86UK5 1308 aa11.77□□□□□ -0.53
GRAMD1B-205ENST00000525945 TTC21AQ8NDW8 1320 aa11.76□□□□□ -0.53
GRAMD1B-205ENST00000525945 RGPD5Q99666 1765 aa11.76□□□□□ -0.53
GRAMD1B-205ENST00000525945 MAP3K5Q99683 1374 aa11.76□□□□□ -0.53
GRAMD1B-205ENST00000525945 CHD4Q14839 1912 aa11.76□□□□□ -0.53
GRAMD1B-205ENST00000525945 SENP3-EIF4A1A0A087X0R7 540 aa11.75□□□□□ -0.53
GRAMD1B-205ENST00000525945 SGIP1Q9BQI5 828 aa11.75□□□□□ -0.53
GRAMD1B-205ENST00000525945 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
GRAMD1B-205ENST00000525945 C1QTNF8P60827 252 aa11.74□□□□□ -0.53
GRAMD1B-205ENST00000525945 ARXQ96QS3 562 aa11.74□□□□□ -0.53
GRAMD1B-205ENST00000525945 TTC21BQ7Z4L5 1316 aa11.74□□□□□ -0.53
GRAMD1B-205ENST00000525945 NFAT5O94916 1531 aa11.74□□□□□ -0.53
GRAMD1B-205ENST00000525945 SOX12O15370 315 aa11.73□□□□□ -0.53
GRAMD1B-205ENST00000525945 UTRNP46939 3433 aa11.72□□□□□ -0.53
GRAMD1B-205ENST00000525945 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
GRAMD1B-205ENST00000525945 BTAF1O14981 1849 aa11.7□□□□□ -0.54
GRAMD1B-205ENST00000525945 ERBB3P21860 1342 aa11.7□□□□□ -0.54
GRAMD1B-205ENST00000525945 QSER1Q2KHR3 1735 aa11.7□□□□□ -0.54
GRAMD1B-205ENST00000525945 IL2RBP14784 551 aa11.7□□□□□ -0.54
GRAMD1B-205ENST00000525945 GPR162Q16538 588 aa11.7□□□□□ -0.54
GRAMD1B-205ENST00000525945 SLC16A10Q8TF71 515 aa11.7□□□□□ -0.54
GRAMD1B-205ENST00000525945 ACSBG1Q96GR2 724 aa11.7□□□□□ -0.54
GRAMD1B-205ENST00000525945 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
GRAMD1B-205ENST00000525945 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
GRAMD1B-205ENST00000525945 GIGYF1O75420 1035 aaPredicted RBP11.68□□□□□ -0.54
GRAMD1B-205ENST00000525945 KCNA4P22459 653 aa11.68□□□□□ -0.54
GRAMD1B-205ENST00000525945 POLD1P28340 1107 aa11.68□□□□□ -0.54
GRAMD1B-205ENST00000525945 SLC27A3Q5K4L6 730 aa11.68□□□□□ -0.54
GRAMD1B-205ENST00000525945 NLRP2Q9NX02 1062 aa11.68□□□□□ -0.54
GRAMD1B-205ENST00000525945 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
GRAMD1B-205ENST00000525945 LTN1O94822 1766 aa11.67□□□□□ -0.54
GRAMD1B-205ENST00000525945 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
GRAMD1B-205ENST00000525945 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
GRAMD1B-205ENST00000525945 COL24A1Q17RW2 1714 aa11.66□□□□□ -0.54
GRAMD1B-205ENST00000525945 FAM208AQ9UK61 1670 aaKnown RBP11.65□□□□□ -0.54
GRAMD1B-205ENST00000525945 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
GRAMD1B-205ENST00000525945 ANKRD24Q8TF21 1146 aa11.65□□□□□ -0.54
GRAMD1B-205ENST00000525945 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
GRAMD1B-205ENST00000525945 LRRC4BQ9NT99 713 aa11.65□□□□□ -0.54
GRAMD1B-205ENST00000525945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.64□□□□□ -0.55
GRAMD1B-205ENST00000525945 L3MBTL2Q969R5 705 aa11.64□□□□□ -0.55
GRAMD1B-205ENST00000525945 SBNO2Q9Y2G9 1366 aa11.64□□□□□ -0.55
GRAMD1B-205ENST00000525945 PNPLA7Q6ZV29 1317 aa11.63□□□□□ -0.55
GRAMD1B-205ENST00000525945 IFFO2Q5TF58 517 aa11.63□□□□□ -0.55
GRAMD1B-205ENST00000525945 TFCP2L1Q9NZI6 479 aa11.63□□□□□ -0.55
GRAMD1B-205ENST00000525945 SHANK3Q9BYB0 1731 aa11.63□□□□□ -0.55
GRAMD1B-205ENST00000525945 EDC4Q6P2E9 1401 aaKnown RBP11.62□□□□□ -0.55
GRAMD1B-205ENST00000525945 GRIN3BO60391 1043 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms