RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 USP54Q70EL1 1684 aa17.87■□□□□ 0.45
CLP1-202ENST00000525602 EDC4Q6P2E9 1401 aaKnown RBP17.87■□□□□ 0.45
CLP1-202ENST00000525602 TERF2IPQ9NYB0 399 aa17.87■□□□□ 0.45
CLP1-202ENST00000525602 PARP4Q9UKK3 1724 aaKnown RBP17.87■□□□□ 0.45
CLP1-202ENST00000525602 APBA3O96018 575 aa17.86■□□□□ 0.45
CLP1-202ENST00000525602 FAM196AQ6ZSG2 479 aa17.86■□□□□ 0.45
CLP1-202ENST00000525602 COL5A2P05997 1499 aaPredicted RBP17.86■□□□□ 0.45
CLP1-202ENST00000525602 EVA1CP58658 441 aa17.85■□□□□ 0.45
CLP1-202ENST00000525602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.85■□□□□ 0.45
CLP1-202ENST00000525602 LRRC37A3O60309 1634 aa17.85■□□□□ 0.45
CLP1-202ENST00000525602 MYOM1P52179 1685 aa17.84■□□□□ 0.45
CLP1-202ENST00000525602 ANKRD36BQ8N2N9 1353 aa17.84■□□□□ 0.45
CLP1-202ENST00000525602 CDCA8Q53HL2 280 aa17.84■□□□□ 0.45
CLP1-202ENST00000525602 PEAK1Q9H792 1746 aa17.84■□□□□ 0.45
CLP1-202ENST00000525602 WNK3Q9BYP7 1800 aa17.83■□□□□ 0.45
CLP1-202ENST00000525602 USP31Q70CQ4 1352 aa17.83■□□□□ 0.45
CLP1-202ENST00000525602 ZBTB7CA1YPR0 619 aa17.83■□□□□ 0.45
CLP1-202ENST00000525602 BARGINQ6ZT62 677 aa17.83■□□□□ 0.45
CLP1-202ENST00000525602 NFAT5O94916 1531 aa17.83■□□□□ 0.45
CLP1-202ENST00000525602 EIF4G2P78344 907 aaKnown RBP eCLIP17.82■□□□□ 0.44
CLP1-202ENST00000525602 PDE3BQ13370 1112 aa17.82■□□□□ 0.44
CLP1-202ENST00000525602 NME9Q86XW9 330 aa17.82■□□□□ 0.44
CLP1-202ENST00000525602 TCP11L2Q8N4U5 519 aa17.82■□□□□ 0.44
CLP1-202ENST00000525602 SBF2Q86WG5 1849 aa17.82■□□□□ 0.44
CLP1-202ENST00000525602 UTRNP46939 3433 aa17.82■□□□□ 0.44
CLP1-202ENST00000525602 PARD3Q8TEW0 1356 aa17.81■□□□□ 0.44
CLP1-202ENST00000525602 COL18A1P39060 1754 aa17.8■□□□□ 0.44
CLP1-202ENST00000525602 HSPA5P11021 654 aaKnown RBP17.8■□□□□ 0.44
CLP1-202ENST00000525602 KCNH5Q8NCM2 988 aa17.8■□□□□ 0.44
CLP1-202ENST00000525602 AATKQ6ZMQ8 1374 aa17.8■□□□□ 0.44
CLP1-202ENST00000525602 OVOS2A0A0J9YW53 1432 aa17.8■□□□□ 0.44
CLP1-202ENST00000525602 OVOS2Q6IE36 1432 aa17.8■□□□□ 0.44
CLP1-202ENST00000525602 RGPD5Q99666 1765 aa17.79■□□□□ 0.44
CLP1-202ENST00000525602 SOX12O15370 315 aa17.79■□□□□ 0.44
CLP1-202ENST00000525602 CRB1P82279 1406 aa17.77■□□□□ 0.44
CLP1-202ENST00000525602 ABCC6O95255 1503 aa17.77■□□□□ 0.44
CLP1-202ENST00000525602 ARHGEF25Q86VW2 580 aa17.77■□□□□ 0.43
CLP1-202ENST00000525602 PTF1AQ7RTS3 328 aa17.76■□□□□ 0.43
CLP1-202ENST00000525602 RGPD3A6NKT7 1758 aaPredicted RBP17.75■□□□□ 0.43
CLP1-202ENST00000525602 LTN1O94822 1766 aa17.75■□□□□ 0.43
CLP1-202ENST00000525602 RGPD4Q7Z3J3 1758 aa17.75■□□□□ 0.43
CLP1-202ENST00000525602 OVOS2A0A0G2JMS6 1433 aa17.75■□□□□ 0.43
CLP1-202ENST00000525602 KIF20BQ96Q89 1820 aa17.74■□□□□ 0.43
CLP1-202ENST00000525602 CASZ1Q86V15 1759 aa17.73■□□□□ 0.43
CLP1-202ENST00000525602 AXIN2Q9Y2T1 843 aa17.73■□□□□ 0.43
CLP1-202ENST00000525602 THRAP3Q9Y2W1 955 aaKnown RBP17.73■□□□□ 0.43
CLP1-202ENST00000525602 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
CLP1-202ENST00000525602 NSD3Q9BZ95 1437 aa17.71■□□□□ 0.43
CLP1-202ENST00000525602 COG3Q96JB2 828 aa17.71■□□□□ 0.43
CLP1-202ENST00000525602 POLR3GLQ9BT43 218 aa17.71■□□□□ 0.43
CLP1-202ENST00000525602 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
CLP1-202ENST00000525602 CARD14Q9BXL6 1004 aa17.7■□□□□ 0.42
CLP1-202ENST00000525602 WDR17Q8IZU2 1322 aa17.69■□□□□ 0.42
CLP1-202ENST00000525602 NBPF14Q5TI25 921 aa17.69■□□□□ 0.42
CLP1-202ENST00000525602 PDGFDQ9GZP0 370 aaPredicted RBP17.69■□□□□ 0.42
CLP1-202ENST00000525602 FYB1O15117 783 aa17.68■□□□□ 0.42
CLP1-202ENST00000525602 DDB1Q16531 1140 aa17.68■□□□□ 0.42
CLP1-202ENST00000525602 MARCH10Q8NA82 808 aaPredicted RBP17.67■□□□□ 0.42
CLP1-202ENST00000525602 GGNBP2Q9H3C7 697 aa17.67■□□□□ 0.42
CLP1-202ENST00000525602 C11orf95C9JLR9 678 aaPredicted RBP17.66■□□□□ 0.42
CLP1-202ENST00000525602 SPON1Q9HCB6 807 aa17.66■□□□□ 0.42
CLP1-202ENST00000525602 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
CLP1-202ENST00000525602 KCNQ2O43526 872 aa17.65■□□□□ 0.42
CLP1-202ENST00000525602 CSB-PGBD3P0DP91 1061 aa17.65■□□□□ 0.42
CLP1-202ENST00000525602 ERBB3P21860 1342 aa17.64■□□□□ 0.41
CLP1-202ENST00000525602 MAP3K19Q56UN5 1328 aa17.64■□□□□ 0.41
CLP1-202ENST00000525602 YY1P25490 414 aa17.64■□□□□ 0.41
CLP1-202ENST00000525602 GOLGB1Q14789 3259 aaKnown RBP17.63■□□□□ 0.41
CLP1-202ENST00000525602 FBLN1P23142 703 aa17.63■□□□□ 0.41
CLP1-202ENST00000525602 PROM2Q8N271 834 aa17.63■□□□□ 0.41
CLP1-202ENST00000525602 CARD10Q9BWT7 1032 aa17.63■□□□□ 0.41
CLP1-202ENST00000525602 BCL11BQ9C0K0 894 aaPredicted RBP17.63■□□□□ 0.41
CLP1-202ENST00000525602 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
CLP1-202ENST00000525602 IP6K1Q92551 441 aa17.62■□□□□ 0.41
CLP1-202ENST00000525602 FAM208AQ9UK61 1670 aaKnown RBP17.62■□□□□ 0.41
CLP1-202ENST00000525602 ANKRD26Q9UPS8 1709 aa17.61■□□□□ 0.41
CLP1-202ENST00000525602 KIF7Q2M1P5 1343 aa17.61■□□□□ 0.41
CLP1-202ENST00000525602 NHSQ6T4R5 1651 aa17.61■□□□□ 0.41
CLP1-202ENST00000525602 RTL1A6NKG5 1358 aa17.61■□□□□ 0.41
CLP1-202ENST00000525602 CCDC7Q96M83 1385 aa17.61■□□□□ 0.41
CLP1-202ENST00000525602 PLSCR1O15162 318 aa17.61■□□□□ 0.41
CLP1-202ENST00000525602 ZBTB7AO95365 584 aa17.61■□□□□ 0.41
CLP1-202ENST00000525602 ANKRD24Q8TF21 1146 aa17.61■□□□□ 0.41
CLP1-202ENST00000525602 PANK3Q9H999 370 aa17.61■□□□□ 0.41
CLP1-202ENST00000525602 TNS2Q63HR2 1409 aa17.61■□□□□ 0.41
CLP1-202ENST00000525602 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
CLP1-202ENST00000525602 HOXC9P31274 260 aa17.59■□□□□ 0.41
CLP1-202ENST00000525602 AMPHP49418 695 aa17.59■□□□□ 0.41
CLP1-202ENST00000525602 BCL9O00512 1426 aa17.59■□□□□ 0.41
CLP1-202ENST00000525602 CDCA7Q9BWT1 371 aaPredicted RBP17.57■□□□□ 0.4
CLP1-202ENST00000525602 NLRP2Q9NX02 1062 aa17.57■□□□□ 0.4
CLP1-202ENST00000525602 BTAF1O14981 1849 aa17.57■□□□□ 0.4
CLP1-202ENST00000525602 PAPPAQ13219 1627 aa17.56■□□□□ 0.4
CLP1-202ENST00000525602 TXNRD1Q16881 649 aa17.56■□□□□ 0.4
CLP1-202ENST00000525602 LTV1Q96GA3 475 aaPredicted RBP17.56■□□□□ 0.4
CLP1-202ENST00000525602 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
CLP1-202ENST00000525602 KIF24Q5T7B8 1368 aa17.56■□□□□ 0.4
CLP1-202ENST00000525602 PTGER2P43116 358 aa17.55■□□□□ 0.4
CLP1-202ENST00000525602 ATF5Q9Y2D1 282 aaPredicted RBP17.55■□□□□ 0.4
CLP1-202ENST00000525602 NSD2O96028 1365 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms