RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
CLN8-207ENST00000524258 COG3Q96JB2 828 aa16.56■□□□□ 0.24
CLN8-207ENST00000524258 PER1O15534 1290 aaPredicted RBP16.54■□□□□ 0.24
CLN8-207ENST00000524258 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
CLN8-207ENST00000524258 ABCC6O95255 1503 aa16.54■□□□□ 0.24
CLN8-207ENST00000524258 MAP3K19Q56UN5 1328 aa16.52■□□□□ 0.24
CLN8-207ENST00000524258 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
CLN8-207ENST00000524258 ZBTB7CA1YPR0 619 aa16.51■□□□□ 0.23
CLN8-207ENST00000524258 FAM98CQ17RN3 349 aaKnown RBP16.51■□□□□ 0.23
CLN8-207ENST00000524258 SEPT12Q8IYM1 358 aa16.51■□□□□ 0.23
CLN8-207ENST00000524258 IP6K1Q92551 441 aa16.51■□□□□ 0.23
CLN8-207ENST00000524258 WDR17Q8IZU2 1322 aa16.5■□□□□ 0.23
CLN8-207ENST00000524258 EVA1CP58658 441 aa16.5■□□□□ 0.23
CLN8-207ENST00000524258 AMER1Q5JTC6 1135 aaPredicted RBP16.5■□□□□ 0.23
CLN8-207ENST00000524258 BARGINQ6ZT62 677 aa16.5■□□□□ 0.23
CLN8-207ENST00000524258 CCDC9Q9Y3X0 531 aaKnown RBP16.5■□□□□ 0.23
CLN8-207ENST00000524258 CRB1P82279 1406 aa16.49■□□□□ 0.23
CLN8-207ENST00000524258 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
CLN8-207ENST00000524258 KIF20BQ96Q89 1820 aa16.49■□□□□ 0.23
CLN8-207ENST00000524258 THSD7AQ9UPZ6 1657 aa16.49■□□□□ 0.23
CLN8-207ENST00000524258 EP400Q96L91 3159 aa16.48■□□□□ 0.23
CLN8-207ENST00000524258 ERBB3P21860 1342 aa16.48■□□□□ 0.23
CLN8-207ENST00000524258 HOXC9P31274 260 aa16.48■□□□□ 0.23
CLN8-207ENST00000524258 TCP11L2Q8N4U5 519 aa16.48■□□□□ 0.23
CLN8-207ENST00000524258 RGPD5Q99666 1765 aa16.48■□□□□ 0.23
CLN8-207ENST00000524258 CARD10Q9BWT7 1032 aa16.47■□□□□ 0.23
CLN8-207ENST00000524258 THRAP3Q9Y2W1 955 aaKnown RBP16.47■□□□□ 0.23
CLN8-207ENST00000524258 LTN1O94822 1766 aa16.46■□□□□ 0.23
CLN8-207ENST00000524258 BLMP54132 1417 aaPredicted RBP16.46■□□□□ 0.23
CLN8-207ENST00000524258 UPF1Q92900 1129 aaKnown RBP eCLIP16.46■□□□□ 0.23
CLN8-207ENST00000524258 ANKRD24Q8TF21 1146 aa16.45■□□□□ 0.22
CLN8-207ENST00000524258 USP35Q9P2H5 1018 aa16.45■□□□□ 0.22
CLN8-207ENST00000524258 EMILIN1Q9Y6C2 1016 aa16.45■□□□□ 0.22
CLN8-207ENST00000524258 RTL1A6NKG5 1358 aa16.45■□□□□ 0.22
CLN8-207ENST00000524258 NSD2O96028 1365 aa16.45■□□□□ 0.22
CLN8-207ENST00000524258 BRWD3Q6RI45 1802 aa16.45■□□□□ 0.22
CLN8-207ENST00000524258 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
CLN8-207ENST00000524258 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
CLN8-207ENST00000524258 KIF24Q5T7B8 1368 aa16.44■□□□□ 0.22
CLN8-207ENST00000524258 TOM1L2Q6ZVM7 507 aa16.44■□□□□ 0.22
CLN8-207ENST00000524258 POLKQ9UBT6 870 aa16.44■□□□□ 0.22
CLN8-207ENST00000524258 KNSTRNQ9Y448 316 aa16.44■□□□□ 0.22
CLN8-207ENST00000524258 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
CLN8-207ENST00000524258 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
CLN8-207ENST00000524258 AMPHP49418 695 aa16.42■□□□□ 0.22
CLN8-207ENST00000524258 KRT27Q7Z3Y8 459 aa16.42■□□□□ 0.22
CLN8-207ENST00000524258 INSRP06213 1382 aa16.41■□□□□ 0.22
CLN8-207ENST00000524258 NPC1L1Q9UHC9 1359 aa16.41■□□□□ 0.22
CLN8-207ENST00000524258 ANKRD26Q9UPS8 1709 aa16.41■□□□□ 0.22
CLN8-207ENST00000524258 FLT4P35916 1363 aa16.4■□□□□ 0.22
CLN8-207ENST00000524258 CSB-PGBD3P0DP91 1061 aa16.4■□□□□ 0.22
CLN8-207ENST00000524258 SMG6Q86US8 1419 aaKnown RBP16.39■□□□□ 0.21
CLN8-207ENST00000524258 NLRP2Q9NX02 1062 aa16.39■□□□□ 0.21
CLN8-207ENST00000524258 TNNT2P45379 298 aaPredicted RBP16.38■□□□□ 0.21
CLN8-207ENST00000524258 FAM182BQ5T319 152 aa16.38■□□□□ 0.21
CLN8-207ENST00000524258 NBPF6Q5VWK0 638 aa16.38■□□□□ 0.21
CLN8-207ENST00000524258 MORC1Q86VD1 984 aa16.38■□□□□ 0.21
CLN8-207ENST00000524258 LTV1Q96GA3 475 aaPredicted RBP16.38■□□□□ 0.21
CLN8-207ENST00000524258 NBPF4Q96M43 638 aa16.38■□□□□ 0.21
CLN8-207ENST00000524258 PARP4Q9UKK3 1724 aaKnown RBP16.37■□□□□ 0.21
CLN8-207ENST00000524258 CDCA7Q9BWT1 371 aaPredicted RBP16.36■□□□□ 0.21
CLN8-207ENST00000524258 FAM208AQ9UK61 1670 aaKnown RBP16.36■□□□□ 0.21
CLN8-207ENST00000524258 NCAPD2Q15021 1401 aa16.36■□□□□ 0.21
CLN8-207ENST00000524258 MAP2P11137 1827 aaKnown RBP16.35■□□□□ 0.21
CLN8-207ENST00000524258 A0A0G2JS52 829 aa16.35■□□□□ 0.21
CLN8-207ENST00000524258 MYT1Q01538 1121 aa16.35■□□□□ 0.21
CLN8-207ENST00000524258 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
CLN8-207ENST00000524258 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
CLN8-207ENST00000524258 MARCH10Q8NA82 808 aaPredicted RBP16.34■□□□□ 0.21
CLN8-207ENST00000524258 LRRC37A3O60309 1634 aa16.34■□□□□ 0.21
CLN8-207ENST00000524258 IL2RBP14784 551 aa16.33■□□□□ 0.2
CLN8-207ENST00000524258 PPM1GO15355 546 aaPredicted RBP16.32■□□□□ 0.2
CLN8-207ENST00000524258 RGPD2P0DJD1 1756 aa16.32■□□□□ 0.2
CLN8-207ENST00000524258 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
CLN8-207ENST00000524258 DDB1Q16531 1140 aa16.32■□□□□ 0.2
CLN8-207ENST00000524258 EYA1Q99502 592 aa16.32■□□□□ 0.2
CLN8-207ENST00000524258 BCL9O00512 1426 aa16.31■□□□□ 0.2
CLN8-207ENST00000524258 PDE3BQ13370 1112 aa16.31■□□□□ 0.2
CLN8-207ENST00000524258 CCDC125Q86Z20 511 aa16.31■□□□□ 0.2
CLN8-207ENST00000524258 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
CLN8-207ENST00000524258 MEGF6O75095 1541 aa16.3■□□□□ 0.2
CLN8-207ENST00000524258 TNS2Q63HR2 1409 aa16.3■□□□□ 0.2
CLN8-207ENST00000524258 EXOC5O00471 708 aa16.3■□□□□ 0.2
CLN8-207ENST00000524258 FAM196AQ6ZSG2 479 aa16.3■□□□□ 0.2
CLN8-207ENST00000524258 MTHFSP49914 203 aa16.29■□□□□ 0.2
CLN8-207ENST00000524258 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
CLN8-207ENST00000524258 IL13P35225 146 aa16.28■□□□□ 0.2
CLN8-207ENST00000524258 IGSF1Q8N6C5 1336 aa16.27■□□□□ 0.2
CLN8-207ENST00000524258 PTF1AQ7RTS3 328 aa16.27■□□□□ 0.2
CLN8-207ENST00000524258 DDX10Q13206 875 aaKnown RBP16.26■□□□□ 0.19
CLN8-207ENST00000524258 COL3A1P02461 1466 aaPredicted RBP16.25■□□□□ 0.19
CLN8-207ENST00000524258 TRIM37O94972 964 aa16.25■□□□□ 0.19
CLN8-207ENST00000524258 DEFB132Q7Z7B7 95 aa16.25■□□□□ 0.19
CLN8-207ENST00000524258 ZCRB1Q8TBF4 217 aaKnown RBP16.24■□□□□ 0.19
CLN8-207ENST00000524258 PPP2R1AP30153 589 aa16.23■□□□□ 0.19
CLN8-207ENST00000524258 CNGB1Q14028 1251 aaPredicted RBP16.23■□□□□ 0.19
CLN8-207ENST00000524258 PARD3Q8TEW0 1356 aa16.23■□□□□ 0.19
CLN8-207ENST00000524258 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
CLN8-207ENST00000524258 SHANK3Q9BYB0 1731 aa16.22■□□□□ 0.19
CLN8-207ENST00000524258 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms