RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 MAN1A2O60476 641 aa7.3□□□□□ -1.24
LINCR-0001-203ENST00000524047 C6orf118Q5T5N4 469 aa7.3□□□□□ -1.24
LINCR-0001-203ENST00000524047 ARHGAP9Q9BRR9 750 aa7.3□□□□□ -1.24
LINCR-0001-203ENST00000524047 CDV3Q9UKY7 258 aaKnown RBP7.3□□□□□ -1.24
LINCR-0001-203ENST00000524047 ERBB4Q15303 1308 aa7.29□□□□□ -1.24
LINCR-0001-203ENST00000524047 SOBPA7XYQ1 873 aa7.29□□□□□ -1.24
LINCR-0001-203ENST00000524047 VSIG8P0DPA2 414 aa7.29□□□□□ -1.24
LINCR-0001-203ENST00000524047 BMP2P12643 396 aa7.29□□□□□ -1.24
LINCR-0001-203ENST00000524047 NR6A1Q15406 480 aa7.29□□□□□ -1.24
LINCR-0001-203ENST00000524047 NEUROD2Q15784 382 aa7.29□□□□□ -1.24
LINCR-0001-203ENST00000524047 TSEN34Q9BSV6 310 aaKnown RBP7.29□□□□□ -1.24
LINCR-0001-203ENST00000524047 SOS2Q07890 1332 aaPredicted RBP7.28□□□□□ -1.24
LINCR-0001-203ENST00000524047 GPSM3Q9Y4H4 160 aa7.28□□□□□ -1.24
LINCR-0001-203ENST00000524047 FAM181BA6NEQ2 426 aa7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 AP1G2O75843 785 aa7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 PTK2Q05397 1052 aa7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 PPP1R26Q5T8A7 1209 aaPredicted RBP7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 Q6ZVU0 165 aa7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 ZBTB33Q86T24 672 aa7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 SLC10A4Q96EP9 437 aa7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 KCTD15Q96SI1 283 aaPredicted RBP7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 PGPEP1Q9NXJ5 209 aa7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 ATP1B4Q9UN42 357 aaPredicted RBP7.27□□□□□ -1.25
LINCR-0001-203ENST00000524047 PRKCSHP14314 528 aaPredicted RBP7.26□□□□□ -1.25
LINCR-0001-203ENST00000524047 ZSCAN1Q8NBB4 408 aa7.26□□□□□ -1.25
LINCR-0001-203ENST00000524047 OCSTAMPQ9BR26 566 aa7.26□□□□□ -1.25
LINCR-0001-203ENST00000524047 DHX9Q08211 1270 aaKnown RBP7.25□□□□□ -1.25
LINCR-0001-203ENST00000524047 PNMA1Q8ND90 353 aa7.25□□□□□ -1.25
LINCR-0001-203ENST00000524047 GOPCQ9HD26 462 aa7.25□□□□□ -1.25
LINCR-0001-203ENST00000524047 DNMT3LQ9UJW3 386 aa7.25□□□□□ -1.25
LINCR-0001-203ENST00000524047 PPFIA3O75145 1194 aa7.24□□□□□ -1.25
LINCR-0001-203ENST00000524047 TTLL8A6PVC2 850 aa7.23□□□□□ -1.25
LINCR-0001-203ENST00000524047 USP17L8P0C7I0 530 aa7.23□□□□□ -1.25
LINCR-0001-203ENST00000524047 RFC5P40937 340 aa7.23□□□□□ -1.25
LINCR-0001-203ENST00000524047 BRPF1P55201 1214 aaPredicted RBP7.23□□□□□ -1.25
LINCR-0001-203ENST00000524047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.23□□□□□ -1.25
LINCR-0001-203ENST00000524047 ADAM32Q8TC27 787 aa7.23□□□□□ -1.25
LINCR-0001-203ENST00000524047 EPS8L1Q8TE68 723 aa7.23□□□□□ -1.25
LINCR-0001-203ENST00000524047 HMX1Q9NP08 348 aaPredicted RBP7.23□□□□□ -1.25
LINCR-0001-203ENST00000524047 SPINT1O43278 529 aa7.22□□□□□ -1.25
LINCR-0001-203ENST00000524047 CBLBQ13191 982 aa7.22□□□□□ -1.25
LINCR-0001-203ENST00000524047 NBPF20Q3BBV1 942 aa7.22□□□□□ -1.25
LINCR-0001-203ENST00000524047 INTS6LQ5JSJ4 861 aaKnown RBP7.22□□□□□ -1.25
LINCR-0001-203ENST00000524047 IL27Q8NEV9 243 aa7.21□□□□□ -1.26
LINCR-0001-203ENST00000524047 PTSQ03393 145 aa7.19□□□□□ -1.26
LINCR-0001-203ENST00000524047 TMEM259Q4ZIN3 620 aa7.19□□□□□ -1.26
LINCR-0001-203ENST00000524047 PCMTD1Q96MG8 357 aaPredicted RBP7.19□□□□□ -1.26
LINCR-0001-203ENST00000524047 ESPNB1AK53 854 aa7.18□□□□□ -1.26
LINCR-0001-203ENST00000524047 DZIP3Q86Y13 1208 aaKnown RBP7.18□□□□□ -1.26
LINCR-0001-203ENST00000524047 TRIM34Q9BYJ4 488 aa7.18□□□□□ -1.26
LINCR-0001-203ENST00000524047 FIGNL2A6NMB9 653 aa7.17□□□□□ -1.26
LINCR-0001-203ENST00000524047 CTSOP43234 321 aaPredicted RBP7.16□□□□□ -1.26
LINCR-0001-203ENST00000524047 SEPT12Q8IYM1 358 aa7.16□□□□□ -1.26
LINCR-0001-203ENST00000524047 ZNF784Q8NCA9 323 aaPredicted RBP7.16□□□□□ -1.26
LINCR-0001-203ENST00000524047 NANOS1Q8WY41 292 aaKnown RBP7.16□□□□□ -1.26
LINCR-0001-203ENST00000524047 AGBL1Q96MI9 1066 aa7.16□□□□□ -1.26
LINCR-0001-203ENST00000524047 TMPRSS4Q9NRS4 437 aa7.16□□□□□ -1.26
LINCR-0001-203ENST00000524047 SLC35F4A4IF30 521 aa7.15□□□□□ -1.26
LINCR-0001-203ENST00000524047 ERVH48-1M5A8F1 160 aa7.15□□□□□ -1.26
LINCR-0001-203ENST00000524047 LILRA1O75019 489 aa7.15□□□□□ -1.26
LINCR-0001-203ENST00000524047 RELBQ01201 579 aa7.15□□□□□ -1.26
LINCR-0001-203ENST00000524047 CCDC155Q8N6L0 562 aa7.15□□□□□ -1.26
LINCR-0001-203ENST00000524047 TRIM52Q96A61 297 aa7.15□□□□□ -1.26
LINCR-0001-203ENST00000524047 INSM2Q96T92 566 aaPredicted RBP7.15□□□□□ -1.26
LINCR-0001-203ENST00000524047 ADH1AP07327 375 aa7.14□□□□□ -1.27
LINCR-0001-203ENST00000524047 GPR161Q8N6U8 529 aaKnown RBP7.14□□□□□ -1.27
LINCR-0001-203ENST00000524047 ZBBXA8MT70 800 aa7.13□□□□□ -1.27
LINCR-0001-203ENST00000524047 ADD1P35611 737 aaKnown RBP7.13□□□□□ -1.27
LINCR-0001-203ENST00000524047 RAB15P59190 212 aa7.13□□□□□ -1.27
LINCR-0001-203ENST00000524047 KDF1Q8NAX2 398 aaPredicted RBP7.13□□□□□ -1.27
LINCR-0001-203ENST00000524047 RNF217Q8TC41 542 aa7.13□□□□□ -1.27
LINCR-0001-203ENST00000524047 GJD4Q96KN9 370 aaPredicted RBP7.13□□□□□ -1.27
LINCR-0001-203ENST00000524047 PTGIRP43119 386 aa7.12□□□□□ -1.27
LINCR-0001-203ENST00000524047 KRT76Q01546 638 aa7.12□□□□□ -1.27
LINCR-0001-203ENST00000524047 CCDC125Q86Z20 511 aa7.12□□□□□ -1.27
LINCR-0001-203ENST00000524047 ZNF395Q9H8N7 513 aaPredicted RBP7.12□□□□□ -1.27
LINCR-0001-203ENST00000524047 POLMQ9NP87 494 aaPredicted RBP7.12□□□□□ -1.27
LINCR-0001-203ENST00000524047 ITGA6P23229 1130 aa7.11□□□□□ -1.27
LINCR-0001-203ENST00000524047 SOCS7O14512 581 aa7.1□□□□□ -1.27
LINCR-0001-203ENST00000524047 FBXO45P0C2W1 286 aa7.1□□□□□ -1.27
LINCR-0001-203ENST00000524047 FOXD4L5Q5VV16 416 aaPredicted RBP7.1□□□□□ -1.27
LINCR-0001-203ENST00000524047 CNTNAP3BQ96NU0 1288 aa7.1□□□□□ -1.27
LINCR-0001-203ENST00000524047 COL25A1Q9BXS0 654 aaPredicted RBP7.1□□□□□ -1.27
LINCR-0001-203ENST00000524047 CNTNAP3Q9BZ76 1288 aa7.1□□□□□ -1.27
LINCR-0001-203ENST00000524047 SENP3-EIF4A1A0A087X0R7 540 aa7.09□□□□□ -1.27
LINCR-0001-203ENST00000524047 MCCD1P59942 119 aaPredicted RBP7.09□□□□□ -1.27
LINCR-0001-203ENST00000524047 BANK1Q8NDB2 785 aa7.09□□□□□ -1.27
LINCR-0001-203ENST00000524047 GIGYF1O75420 1035 aaPredicted RBP7.08□□□□□ -1.28
LINCR-0001-203ENST00000524047 RNF144AP50876 292 aaPredicted RBP7.08□□□□□ -1.28
LINCR-0001-203ENST00000524047 SV2AQ7L0J3 742 aa7.08□□□□□ -1.28
LINCR-0001-203ENST00000524047 ZNF592Q92610 1267 aa7.08□□□□□ -1.28
LINCR-0001-203ENST00000524047 CYLDQ9NQC7 956 aa7.08□□□□□ -1.28
LINCR-0001-203ENST00000524047 PCDHB9Q9Y5E1 797 aa7.08□□□□□ -1.28
LINCR-0001-203ENST00000524047 RNFT1Q5M7Z0 435 aa7.07□□□□□ -1.28
LINCR-0001-203ENST00000524047 LYSMD3Q7Z3D4 306 aa7.07□□□□□ -1.28
LINCR-0001-203ENST00000524047 VWA5B2Q8N398 1253 aa7.07□□□□□ -1.28
LINCR-0001-203ENST00000524047 ATP5J2-PTCD1G3V325 749 aa7.06□□□□□ -1.28
LINCR-0001-203ENST00000524047 SLURP2P0DP57 97 aa7.06□□□□□ -1.28
LINCR-0001-203ENST00000524047 GPC1P35052 558 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms