RNA–Protein interactions for RNA: ENST00000523210.1

IGHV3-65-201, Transcript of immunoglobulin heavy variable 3-65 (pseudogene), humanhuman

BASIC

Gene IGHV3-65, Length 341 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-65-201ENST00000523210 ABCC6O95255 1503 aa23.67■■□□□ 1.38
IGHV3-65-201ENST00000523210 SPATA31A1Q5TZJ5 1347 aa23.66■■□□□ 1.38
IGHV3-65-201ENST00000523210 COL18A1P39060 1754 aa23.66■■□□□ 1.38
IGHV3-65-201ENST00000523210 LARP1Q6PKG0 1096 aaKnown RBP23.66■■□□□ 1.38
IGHV3-65-201ENST00000523210 CGNL1Q0VF96 1302 aa23.65■■□□□ 1.38
IGHV3-65-201ENST00000523210 CCDC7Q96M83 1385 aa23.64■■□□□ 1.37
IGHV3-65-201ENST00000523210 WASHC2AQ641Q2 1341 aa23.62■■□□□ 1.37
IGHV3-65-201ENST00000523210 FAM98CQ17RN3 349 aaKnown RBP23.62■■□□□ 1.37
IGHV3-65-201ENST00000523210 SEPT12Q8IYM1 358 aa23.62■■□□□ 1.37
IGHV3-65-201ENST00000523210 MAP3K19Q56UN5 1328 aa23.6■■□□□ 1.37
IGHV3-65-201ENST00000523210 WDR17Q8IZU2 1322 aa23.6■■□□□ 1.37
IGHV3-65-201ENST00000523210 CRB1P82279 1406 aa23.6■■□□□ 1.37
IGHV3-65-201ENST00000523210 BARGINQ6ZT62 677 aa23.6■■□□□ 1.37
IGHV3-65-201ENST00000523210 FBLN1P23142 703 aa23.59■■□□□ 1.37
IGHV3-65-201ENST00000523210 TCP11L2Q8N4U5 519 aa23.59■■□□□ 1.37
IGHV3-65-201ENST00000523210 IP6K1Q92551 441 aa23.59■■□□□ 1.37
IGHV3-65-201ENST00000523210 THRAP3Q9Y2W1 955 aaKnown RBP23.59■■□□□ 1.37
IGHV3-65-201ENST00000523210 KIF20BQ96Q89 1820 aa23.59■■□□□ 1.37
IGHV3-65-201ENST00000523210 ZEB1P37275 1124 aaPredicted RBP23.57■■□□□ 1.36
IGHV3-65-201ENST00000523210 USP35Q9P2H5 1018 aa23.57■■□□□ 1.36
IGHV3-65-201ENST00000523210 BLMP54132 1417 aaPredicted RBP23.57■■□□□ 1.36
IGHV3-65-201ENST00000523210 ERBB3P21860 1342 aa23.57■■□□□ 1.36
IGHV3-65-201ENST00000523210 NSD2O96028 1365 aa23.56■■□□□ 1.36
IGHV3-65-201ENST00000523210 TOM1L2Q6ZVM7 507 aa23.56■■□□□ 1.36
IGHV3-65-201ENST00000523210 RTL1A6NKG5 1358 aa23.55■■□□□ 1.36
IGHV3-65-201ENST00000523210 CSB-PGBD3P0DP91 1061 aa23.55■■□□□ 1.36
IGHV3-65-201ENST00000523210 HOXC9P31274 260 aa23.55■■□□□ 1.36
IGHV3-65-201ENST00000523210 RRS1Q15050 365 aaKnown RBP23.55■■□□□ 1.36
IGHV3-65-201ENST00000523210 KNSTRNQ9Y448 316 aa23.55■■□□□ 1.36
IGHV3-65-201ENST00000523210 PER1O15534 1290 aaPredicted RBP23.54■■□□□ 1.36
IGHV3-65-201ENST00000523210 AMPHP49418 695 aa23.54■■□□□ 1.36
IGHV3-65-201ENST00000523210 CARD10Q9BWT7 1032 aa23.54■■□□□ 1.36
IGHV3-65-201ENST00000523210 LTN1O94822 1766 aa23.54■■□□□ 1.36
IGHV3-65-201ENST00000523210 THSD7AQ9UPZ6 1657 aa23.54■■□□□ 1.36
IGHV3-65-201ENST00000523210 A0A0G2JS52 829 aa23.53■■□□□ 1.36
IGHV3-65-201ENST00000523210 MYT1Q01538 1121 aa23.53■■□□□ 1.36
IGHV3-65-201ENST00000523210 ANKRD24Q8TF21 1146 aa23.53■■□□□ 1.36
IGHV3-65-201ENST00000523210 KIF24Q5T7B8 1368 aa23.52■■□□□ 1.36
IGHV3-65-201ENST00000523210 AMER1Q5JTC6 1135 aaPredicted RBP23.52■■□□□ 1.36
IGHV3-65-201ENST00000523210 KRT27Q7Z3Y8 459 aa23.52■■□□□ 1.36
IGHV3-65-201ENST00000523210 UPF1Q92900 1129 aaKnown RBP eCLIP23.51■■□□□ 1.35
IGHV3-65-201ENST00000523210 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
IGHV3-65-201ENST00000523210 FLT4P35916 1363 aa23.49■■□□□ 1.35
IGHV3-65-201ENST00000523210 CDCA7Q9BWT1 371 aaPredicted RBP23.47■■□□□ 1.35
IGHV3-65-201ENST00000523210 NLRP2Q9NX02 1062 aa23.47■■□□□ 1.35
IGHV3-65-201ENST00000523210 EMILIN1Q9Y6C2 1016 aa23.47■■□□□ 1.35
IGHV3-65-201ENST00000523210 INSRP06213 1382 aa23.46■■□□□ 1.35
IGHV3-65-201ENST00000523210 POLKQ9UBT6 870 aa23.46■■□□□ 1.35
IGHV3-65-201ENST00000523210 ANKRD26Q9UPS8 1709 aa23.46■■□□□ 1.35
IGHV3-65-201ENST00000523210 BRWD3Q6RI45 1802 aa23.45■■□□□ 1.34
IGHV3-65-201ENST00000523210 DISP2A7MBM2 1401 aa23.45■■□□□ 1.34
IGHV3-65-201ENST00000523210 HSP90AB2PQ58FF8 381 aa23.45■■□□□ 1.34
IGHV3-65-201ENST00000523210 MORC1Q86VD1 984 aa23.45■■□□□ 1.34
IGHV3-65-201ENST00000523210 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
IGHV3-65-201ENST00000523210 NPC1L1Q9UHC9 1359 aa23.44■■□□□ 1.34
IGHV3-65-201ENST00000523210 PEAK1Q9H792 1746 aa23.43■■□□□ 1.34
IGHV3-65-201ENST00000523210 TNNT2P45379 298 aaPredicted RBP23.43■■□□□ 1.34
IGHV3-65-201ENST00000523210 PDE3BQ13370 1112 aa23.41■■□□□ 1.34
IGHV3-65-201ENST00000523210 EP400Q96L91 3159 aa23.4■■□□□ 1.34
IGHV3-65-201ENST00000523210 PARP4Q9UKK3 1724 aaKnown RBP23.4■■□□□ 1.34
IGHV3-65-201ENST00000523210 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
IGHV3-65-201ENST00000523210 CCDC125Q86Z20 511 aa23.4■■□□□ 1.34
IGHV3-65-201ENST00000523210 SMG6Q86US8 1419 aaKnown RBP23.4■■□□□ 1.34
IGHV3-65-201ENST00000523210 DDB1Q16531 1140 aa23.39■■□□□ 1.33
IGHV3-65-201ENST00000523210 FAM208AQ9UK61 1670 aaKnown RBP23.38■■□□□ 1.33
IGHV3-65-201ENST00000523210 IL2RBP14784 551 aa23.38■■□□□ 1.33
IGHV3-65-201ENST00000523210 NBPF6Q5VWK0 638 aa23.38■■□□□ 1.33
IGHV3-65-201ENST00000523210 NBPF4Q96M43 638 aa23.38■■□□□ 1.33
IGHV3-65-201ENST00000523210 CC2D1BQ5T0F9 858 aaKnown RBP23.37■■□□□ 1.33
IGHV3-65-201ENST00000523210 FAM182BQ5T319 152 aa23.37■■□□□ 1.33
IGHV3-65-201ENST00000523210 FAM196AQ6ZSG2 479 aa23.36■■□□□ 1.33
IGHV3-65-201ENST00000523210 LRRC37A3O60309 1634 aa23.36■■□□□ 1.33
IGHV3-65-201ENST00000523210 WNK3Q9BYP7 1800 aa23.36■■□□□ 1.33
IGHV3-65-201ENST00000523210 EXOC5O00471 708 aa23.35■■□□□ 1.33
IGHV3-65-201ENST00000523210 TNS2Q63HR2 1409 aa23.33■■□□□ 1.33
IGHV3-65-201ENST00000523210 MAP2P11137 1827 aaKnown RBP23.33■■□□□ 1.33
IGHV3-65-201ENST00000523210 EIF4A2Q14240 407 aaKnown RBP23.31■■□□□ 1.32
IGHV3-65-201ENST00000523210 MARCH10Q8NA82 808 aaPredicted RBP23.31■■□□□ 1.32
IGHV3-65-201ENST00000523210 OVOS2A0A0G2JMS6 1433 aa23.31■■□□□ 1.32
IGHV3-65-201ENST00000523210 NCAPD2Q15021 1401 aa23.31■■□□□ 1.32
IGHV3-65-201ENST00000523210 USHBP1Q8N6Y0 703 aa23.3■■□□□ 1.32
IGHV3-65-201ENST00000523210 BCL9O00512 1426 aa23.3■■□□□ 1.32
IGHV3-65-201ENST00000523210 EYA1Q99502 592 aa23.29■■□□□ 1.32
IGHV3-65-201ENST00000523210 MEGF6O75095 1541 aa23.28■■□□□ 1.32
IGHV3-65-201ENST00000523210 MTHFSP49914 203 aa23.27■■□□□ 1.32
IGHV3-65-201ENST00000523210 SF3B2Q13435 895 aaKnown RBP23.27■■□□□ 1.32
IGHV3-65-201ENST00000523210 RGPD2P0DJD1 1756 aa23.27■■□□□ 1.32
IGHV3-65-201ENST00000523210 RAPGEF4Q8WZA2 1011 aa23.26■■□□□ 1.31
IGHV3-65-201ENST00000523210 TRIM37O94972 964 aa23.25■■□□□ 1.31
IGHV3-65-201ENST00000523210 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
IGHV3-65-201ENST00000523210 TATP17735 454 aaPredicted RBP23.24■■□□□ 1.31
IGHV3-65-201ENST00000523210 IGSF1Q8N6C5 1336 aa23.24■■□□□ 1.31
IGHV3-65-201ENST00000523210 ZCRB1Q8TBF4 217 aaKnown RBP23.23■■□□□ 1.31
IGHV3-65-201ENST00000523210 IL13P35225 146 aa23.22■■□□□ 1.31
IGHV3-65-201ENST00000523210 DDX10Q13206 875 aaKnown RBP23.22■■□□□ 1.31
IGHV3-65-201ENST00000523210 DEFB132Q7Z7B7 95 aa23.22■■□□□ 1.31
IGHV3-65-201ENST00000523210 BAG6P46379 1132 aa23.21■■□□□ 1.31
IGHV3-65-201ENST00000523210 RGPD1P0DJD0 1748 aa23.19■■□□□ 1.3
IGHV3-65-201ENST00000523210 DDX54Q8TDD1 881 aaKnown RBP23.19■■□□□ 1.3
IGHV3-65-201ENST00000523210 PLEKHG2Q9H7P9 1386 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms