RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-219ENST00000522321 NUDCQ9Y266 331 aa16.46■□□□□ 0.23
SPIDR-219ENST00000522321 COL22A1Q8NFW1 1626 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-219ENST00000522321 KIAA0232Q92628 1395 aa16.45■□□□□ 0.22
SPIDR-219ENST00000522321 AFF2P51816 1311 aa16.45■□□□□ 0.22
SPIDR-219ENST00000522321 DIAPH1O60610 1272 aaKnown RBP16.44■□□□□ 0.22
SPIDR-219ENST00000522321 CCDC184Q52MB2 194 aa16.44■□□□□ 0.22
SPIDR-219ENST00000522321 ARHGEF25Q86VW2 580 aa16.44■□□□□ 0.22
SPIDR-219ENST00000522321 C8orf37Q96NL8 207 aa16.44■□□□□ 0.22
SPIDR-219ENST00000522321 CPDO75976 1380 aa16.43■□□□□ 0.22
SPIDR-219ENST00000522321 HOXC9P31274 260 aa16.43■□□□□ 0.22
SPIDR-219ENST00000522321 FAM9BQ8IZU0 186 aa16.43■□□□□ 0.22
SPIDR-219ENST00000522321 ABCA3Q99758 1704 aa16.42■□□□□ 0.22
SPIDR-219ENST00000522321 U2SURPO15042 1029 aaKnown RBP16.42■□□□□ 0.22
SPIDR-219ENST00000522321 SHPRHQ149N8 1683 aa16.42■□□□□ 0.22
SPIDR-219ENST00000522321 BLMP54132 1417 aaPredicted RBP16.42■□□□□ 0.22
SPIDR-219ENST00000522321 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
SPIDR-219ENST00000522321 INSRP06213 1382 aa16.41■□□□□ 0.22
SPIDR-219ENST00000522321 ABCC6O95255 1503 aa16.41■□□□□ 0.22
SPIDR-219ENST00000522321 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
SPIDR-219ENST00000522321 IP6K1Q92551 441 aa16.41■□□□□ 0.22
SPIDR-219ENST00000522321 LTV1Q96GA3 475 aaPredicted RBP16.41■□□□□ 0.22
SPIDR-219ENST00000522321 COL3A1P02461 1466 aaPredicted RBP16.41■□□□□ 0.22
SPIDR-219ENST00000522321 ADAMTS2O95450 1211 aa16.4■□□□□ 0.22
SPIDR-219ENST00000522321 CHRNA2Q15822 529 aa16.4■□□□□ 0.22
SPIDR-219ENST00000522321 NGLY1Q96IV0 654 aa16.4■□□□□ 0.22
SPIDR-219ENST00000522321 QTRT2Q9H974 415 aaKnown RBP16.4■□□□□ 0.22
SPIDR-219ENST00000522321 PEAK1Q9H792 1746 aa16.39■□□□□ 0.21
SPIDR-219ENST00000522321 LTN1O94822 1766 aa16.39■□□□□ 0.21
SPIDR-219ENST00000522321 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
SPIDR-219ENST00000522321 CSB-PGBD3P0DP91 1061 aa16.39■□□□□ 0.21
SPIDR-219ENST00000522321 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
SPIDR-219ENST00000522321 EIF4A2Q14240 407 aaKnown RBP16.38■□□□□ 0.21
SPIDR-219ENST00000522321 RBM6P78332 1123 aaKnown RBP16.37■□□□□ 0.21
SPIDR-219ENST00000522321 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
SPIDR-219ENST00000522321 ANKRD24Q8TF21 1146 aa16.37■□□□□ 0.21
SPIDR-219ENST00000522321 NEFMP07197 916 aa16.36■□□□□ 0.21
SPIDR-219ENST00000522321 MAP2P11137 1827 aaKnown RBP16.35■□□□□ 0.21
SPIDR-219ENST00000522321 IL13P35225 146 aa16.35■□□□□ 0.21
SPIDR-219ENST00000522321 EVA1CP58658 441 aa16.35■□□□□ 0.21
SPIDR-219ENST00000522321 YTHDC1Q96MU7 727 aaKnown RBP16.34■□□□□ 0.21
SPIDR-219ENST00000522321 PNNQ9H307 717 aaKnown RBP16.34■□□□□ 0.21
SPIDR-219ENST00000522321 ERBB3P21860 1342 aa16.34■□□□□ 0.21
SPIDR-219ENST00000522321 COL14A1Q05707 1796 aaKnown RBP16.33■□□□□ 0.21
SPIDR-219ENST00000522321 STRN4Q9NRL3 753 aa16.33■□□□□ 0.2
SPIDR-219ENST00000522321 BTG4Q9NY30 223 aa16.33■□□□□ 0.2
SPIDR-219ENST00000522321 MAPK8IP3Q9UPT6 1336 aa16.33■□□□□ 0.2
SPIDR-219ENST00000522321 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
SPIDR-219ENST00000522321 COL5A2P05997 1499 aaPredicted RBP16.32■□□□□ 0.2
SPIDR-219ENST00000522321 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
SPIDR-219ENST00000522321 ADAMTS8Q9UP79 889 aa16.32■□□□□ 0.2
SPIDR-219ENST00000522321 AXIN2Q9Y2T1 843 aa16.32■□□□□ 0.2
SPIDR-219ENST00000522321 HMOX1P09601 288 aa16.31■□□□□ 0.2
SPIDR-219ENST00000522321 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
SPIDR-219ENST00000522321 TOM1L2Q6ZVM7 507 aa16.31■□□□□ 0.2
SPIDR-219ENST00000522321 IGSF1Q8N6C5 1336 aa16.3■□□□□ 0.2
SPIDR-219ENST00000522321 USP21Q9UK80 565 aa16.3■□□□□ 0.2
SPIDR-219ENST00000522321 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
SPIDR-219ENST00000522321 WDR17Q8IZU2 1322 aa16.29■□□□□ 0.2
SPIDR-219ENST00000522321 CCDC146Q8IYE0 955 aa16.29■□□□□ 0.2
SPIDR-219ENST00000522321 EYA1Q99502 592 aa16.29■□□□□ 0.2
SPIDR-219ENST00000522321 CAMTA1Q9Y6Y1 1673 aa16.29■□□□□ 0.2
SPIDR-219ENST00000522321 RGS12O14924 1447 aa16.28■□□□□ 0.2
SPIDR-219ENST00000522321 FCHSD2O94868 740 aa16.28■□□□□ 0.2
SPIDR-219ENST00000522321 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
SPIDR-219ENST00000522321 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
SPIDR-219ENST00000522321 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
SPIDR-219ENST00000522321 AEBP1Q8IUX7 1158 aa16.27■□□□□ 0.2
SPIDR-219ENST00000522321 RUNDC1Q96C34 613 aa16.27■□□□□ 0.2
SPIDR-219ENST00000522321 TRPC5Q9UL62 973 aaPredicted RBP16.27■□□□□ 0.2
SPIDR-219ENST00000522321 CCDC9Q9Y3X0 531 aaKnown RBP16.27■□□□□ 0.2
SPIDR-219ENST00000522321 COL18A1P39060 1754 aa16.27■□□□□ 0.2
SPIDR-219ENST00000522321 PLCH1Q4KWH8 1693 aa16.27■□□□□ 0.19
SPIDR-219ENST00000522321 FAM208AQ9UK61 1670 aaKnown RBP16.27■□□□□ 0.19
SPIDR-219ENST00000522321 NBPF6Q5VWK0 638 aa16.26■□□□□ 0.19
SPIDR-219ENST00000522321 NBPF4Q96M43 638 aa16.26■□□□□ 0.19
SPIDR-219ENST00000522321 RSPH6AQ9H0K4 717 aa16.26■□□□□ 0.19
SPIDR-219ENST00000522321 CRB1P82279 1406 aa16.26■□□□□ 0.19
SPIDR-219ENST00000522321 LARP1Q6PKG0 1096 aaKnown RBP16.25■□□□□ 0.19
SPIDR-219ENST00000522321 RAPGEF4Q8WZA2 1011 aa16.25■□□□□ 0.19
SPIDR-219ENST00000522321 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
SPIDR-219ENST00000522321 KDRP35968 1356 aa16.25■□□□□ 0.19
SPIDR-219ENST00000522321 SLIT2O94813 1529 aa16.24■□□□□ 0.19
SPIDR-219ENST00000522321 USP35Q9P2H5 1018 aa16.24■□□□□ 0.19
SPIDR-219ENST00000522321 TATP17735 454 aaPredicted RBP16.23■□□□□ 0.19
SPIDR-219ENST00000522321 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
SPIDR-219ENST00000522321 CARD10Q9BWT7 1032 aa16.23■□□□□ 0.19
SPIDR-219ENST00000522321 NWD2Q9ULI1 1742 aa16.22■□□□□ 0.19
SPIDR-219ENST00000522321 APAF1O14727 1248 aa16.21■□□□□ 0.19
SPIDR-219ENST00000522321 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
SPIDR-219ENST00000522321 NRAPQ86VF7 1730 aa16.2■□□□□ 0.18
SPIDR-219ENST00000522321 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
SPIDR-219ENST00000522321 FNBP4Q8N3X1 1017 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-219ENST00000522321 GAS2L2Q8NHY3 880 aa16.2■□□□□ 0.18
SPIDR-219ENST00000522321 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-219ENST00000522321 RGPD5Q99666 1765 aa16.2■□□□□ 0.18
SPIDR-219ENST00000522321 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
SPIDR-219ENST00000522321 PLEKHO1Q53GL0 409 aaPredicted RBP16.19■□□□□ 0.18
SPIDR-219ENST00000522321 TCP11L2Q8N4U5 519 aa16.19■□□□□ 0.18
SPIDR-219ENST00000522321 PLEKHF1Q96S99 279 aa16.19■□□□□ 0.18
SPIDR-219ENST00000522321 RRP7AQ9Y3A4 280 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms