RNA–Protein interactions for RNA: ENST00000522178.1

VDAC3-210, Transcript of voltage dependent anion channel 3, humanhuman

TSL 3

Gene VDAC3, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-210ENST00000522178 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
VDAC3-210ENST00000522178 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
VDAC3-210ENST00000522178 CCDC125Q86Z20 511 aa11.79□□□□□ -0.52
VDAC3-210ENST00000522178 FAM174AQ8TBP5 190 aa11.79□□□□□ -0.52
VDAC3-210ENST00000522178 USP17L3A6NCW0 530 aa11.78□□□□□ -0.52
VDAC3-210ENST00000522178 USP17L4A6NCW7 530 aa11.78□□□□□ -0.52
VDAC3-210ENST00000522178 USP17L2Q6R6M4 530 aa11.78□□□□□ -0.52
VDAC3-210ENST00000522178 USP17L1Q7RTZ2 530 aa11.78□□□□□ -0.52
VDAC3-210ENST00000522178 RETREG2Q8NC44 543 aa11.78□□□□□ -0.52
VDAC3-210ENST00000522178 VRTNQ9H8Y1 702 aa11.78□□□□□ -0.52
VDAC3-210ENST00000522178 ATG7O95352 703 aa11.77□□□□□ -0.53
VDAC3-210ENST00000522178 SKOR1P84550 965 aa11.77□□□□□ -0.53
VDAC3-210ENST00000522178 PLPP7Q8NBV4 271 aa11.77□□□□□ -0.53
VDAC3-210ENST00000522178 TRAIPQ9BWF2 469 aa11.77□□□□□ -0.53
VDAC3-210ENST00000522178 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
VDAC3-210ENST00000522178 SEPT12Q8IYM1 358 aa11.76□□□□□ -0.53
VDAC3-210ENST00000522178 ESPNB1AK53 854 aa11.75□□□□□ -0.53
VDAC3-210ENST00000522178 MAP4K5Q9Y4K4 846 aa11.75□□□□□ -0.53
VDAC3-210ENST00000522178 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
VDAC3-210ENST00000522178 TRAF7Q6Q0C0 670 aa11.74□□□□□ -0.53
VDAC3-210ENST00000522178 USTQ9Y2C2 406 aa11.74□□□□□ -0.53
VDAC3-210ENST00000522178 CSB-PGBD3P0DP91 1061 aa11.73□□□□□ -0.53
VDAC3-210ENST00000522178 EML3Q32P44 896 aa11.73□□□□□ -0.53
VDAC3-210ENST00000522178 LIAT1Q6ZQX7 453 aa11.73□□□□□ -0.53
VDAC3-210ENST00000522178 ATP5J2-PTCD1G3V325 749 aa11.72□□□□□ -0.53
VDAC3-210ENST00000522178 NCOA4Q13772 614 aa11.72□□□□□ -0.53
VDAC3-210ENST00000522178 ELOAQ14241 798 aaKnown RBP11.72□□□□□ -0.53
VDAC3-210ENST00000522178 EHBP1Q8NDI1 1231 aa11.72□□□□□ -0.53
VDAC3-210ENST00000522178 RC3H1Q5TC82 1133 aaKnown RBP11.71□□□□□ -0.53
VDAC3-210ENST00000522178 MPNDQ8N594 471 aa11.71□□□□□ -0.53
VDAC3-210ENST00000522178 CCDC85AQ96PX6 553 aaPredicted RBP11.71□□□□□ -0.53
VDAC3-210ENST00000522178 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
VDAC3-210ENST00000522178 DOLKQ9UPQ8 538 aa11.71□□□□□ -0.53
VDAC3-210ENST00000522178 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
VDAC3-210ENST00000522178 DEPDC4Q8N2C3 294 aa11.7□□□□□ -0.54
VDAC3-210ENST00000522178 KCTD15Q96SI1 283 aaPredicted RBP11.7□□□□□ -0.54
VDAC3-210ENST00000522178 FAM196BA6NMK8 535 aa11.69□□□□□ -0.54
VDAC3-210ENST00000522178 SLC19A1P41440 591 aa11.69□□□□□ -0.54
VDAC3-210ENST00000522178 VASH1Q7L8A9 365 aaPredicted RBP11.69□□□□□ -0.54
VDAC3-210ENST00000522178 EMID1Q96A84 441 aaPredicted RBP11.69□□□□□ -0.54
VDAC3-210ENST00000522178 SIRT1Q96EB6 747 aa11.69□□□□□ -0.54
VDAC3-210ENST00000522178 CDK15Q96Q40 435 aa11.69□□□□□ -0.54
VDAC3-210ENST00000522178 TRIM50Q86XT4 487 aa11.68□□□□□ -0.54
VDAC3-210ENST00000522178 TRIM52Q96A61 297 aa11.68□□□□□ -0.54
VDAC3-210ENST00000522178 NOD1Q9Y239 953 aa11.68□□□□□ -0.54
VDAC3-210ENST00000522178 LARP1Q6PKG0 1096 aaKnown RBP11.67□□□□□ -0.54
VDAC3-210ENST00000522178 PLA2G2EQ9NZK7 142 aa11.67□□□□□ -0.54
VDAC3-210ENST00000522178 A0A0G2JS52 829 aa11.66□□□□□ -0.54
VDAC3-210ENST00000522178 WNT7AO00755 349 aa11.66□□□□□ -0.54
VDAC3-210ENST00000522178 ATP1A2P50993 1020 aa11.66□□□□□ -0.54
VDAC3-210ENST00000522178 TSGA10IPQ3SY00 556 aa11.66□□□□□ -0.54
VDAC3-210ENST00000522178 RASA1P20936 1047 aa11.65□□□□□ -0.54
VDAC3-210ENST00000522178 KCTD17Q8N5Z5 321 aa11.65□□□□□ -0.54
VDAC3-210ENST00000522178 PCDHB11Q9Y5F2 797 aa11.65□□□□□ -0.54
VDAC3-210ENST00000522178 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L10C9JJH3 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L21D6R901 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 SIAH2O43255 324 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 USP4Q13107 963 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 OXLD1Q5BKU9 147 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 INTS6LQ5JSJ4 861 aaKnown RBP11.64□□□□□ -0.55
VDAC3-210ENST00000522178 SPRYD7Q5W111 196 aa11.64□□□□□ -0.55
VDAC3-210ENST00000522178 DHX9Q08211 1270 aaKnown RBP11.63□□□□□ -0.55
VDAC3-210ENST00000522178 PTK7Q13308 1070 aa11.63□□□□□ -0.55
VDAC3-210ENST00000522178 ARID5BQ14865 1188 aa11.62□□□□□ -0.55
VDAC3-210ENST00000522178 CRTC2Q53ET0 693 aaPredicted RBP11.62□□□□□ -0.55
VDAC3-210ENST00000522178 NOVA2Q9UNW9 492 aaKnown RBP11.62□□□□□ -0.55
VDAC3-210ENST00000522178 TMEM88BA6NKF7 163 aa11.61□□□□□ -0.55
VDAC3-210ENST00000522178 ZNF598Q86UK7 904 aaKnown RBP11.61□□□□□ -0.55
VDAC3-210ENST00000522178 LARGE2Q8N3Y3 721 aa11.61□□□□□ -0.55
VDAC3-210ENST00000522178 OGFOD1Q8N543 542 aa11.61□□□□□ -0.55
VDAC3-210ENST00000522178 CDCA7Q9BWT1 371 aaPredicted RBP11.61□□□□□ -0.55
VDAC3-210ENST00000522178 DNAAF2Q9NVR5 837 aaKnown RBP11.61□□□□□ -0.55
VDAC3-210ENST00000522178 ZMIZ1Q9ULJ6 1067 aa11.61□□□□□ -0.55
VDAC3-210ENST00000522178 V9GY48 417 aaPredicted RBP11.61□□□□□ -0.55
VDAC3-210ENST00000522178 ADH1CP00326 375 aa11.6□□□□□ -0.55
VDAC3-210ENST00000522178 GRM5P41594 1212 aa11.6□□□□□ -0.55
VDAC3-210ENST00000522178 NR5A1Q13285 461 aa11.6□□□□□ -0.55
VDAC3-210ENST00000522178 MRGPRX2Q96LB1 330 aa11.6□□□□□ -0.55
VDAC3-210ENST00000522178 TLL2Q9Y6L7 1015 aa11.6□□□□□ -0.55
VDAC3-210ENST00000522178 ERVH48-1M5A8F1 160 aa11.59□□□□□ -0.55
VDAC3-210ENST00000522178 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
VDAC3-210ENST00000522178 FSHRP23945 695 aa11.59□□□□□ -0.55
VDAC3-210ENST00000522178 RAB15P59190 212 aa11.59□□□□□ -0.55
VDAC3-210ENST00000522178 GTF2IP78347 998 aa11.59□□□□□ -0.55
VDAC3-210ENST00000522178 ZNF697Q5TEC3 545 aa11.59□□□□□ -0.55
VDAC3-210ENST00000522178 ANKMY2Q8IV38 441 aa11.59□□□□□ -0.55
VDAC3-210ENST00000522178 CLDN10P78369 228 aa11.58□□□□□ -0.56
VDAC3-210ENST00000522178 SIX5Q8N196 739 aa11.58□□□□□ -0.56
VDAC3-210ENST00000522178 FAM200AQ8TCP9 573 aa11.58□□□□□ -0.56
VDAC3-210ENST00000522178 ZBTB7CA1YPR0 619 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms