RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 NUTM2DQ5VT03 806 aaPredicted RBP8.2□□□□□ -1.1
PCM1-214ENST00000521338 NUTM2AQ8IVF1 878 aaPredicted RBP8.2□□□□□ -1.1
PCM1-214ENST00000521338 MAGEB6P1A0A0J9YX57 407 aa8.19□□□□□ -1.1
PCM1-214ENST00000521338 SPINT1O43278 529 aa8.19□□□□□ -1.1
PCM1-214ENST00000521338 RASSF7Q02833 373 aa8.19□□□□□ -1.1
PCM1-214ENST00000521338 CBLBQ13191 982 aa8.19□□□□□ -1.1
PCM1-214ENST00000521338 RNFT1Q5M7Z0 435 aa8.19□□□□□ -1.1
PCM1-214ENST00000521338 PPP1R26Q5T8A7 1209 aaPredicted RBP8.19□□□□□ -1.1
PCM1-214ENST00000521338 COL25A1Q9BXS0 654 aaPredicted RBP8.19□□□□□ -1.1
PCM1-214ENST00000521338 FIGNL2A6NMB9 653 aa8.18□□□□□ -1.1
PCM1-214ENST00000521338 TMEM151AQ8N4L1 468 aa8.18□□□□□ -1.1
PCM1-214ENST00000521338 GPKOWQ92917 476 aaPredicted RBP eCLIP8.18□□□□□ -1.13e-6■□□□□ 9.4
PCM1-214ENST00000521338 SLC35F4A4IF30 521 aa8.17□□□□□ -1.1
PCM1-214ENST00000521338 GDF11O95390 407 aa8.17□□□□□ -1.1
PCM1-214ENST00000521338 ZNF385CQ66K41 422 aaPredicted RBP8.17□□□□□ -1.1
PCM1-214ENST00000521338 CCDC155Q8N6L0 562 aa8.17□□□□□ -1.1
PCM1-214ENST00000521338 CARD14Q9BXL6 1004 aa8.17□□□□□ -1.1
PCM1-214ENST00000521338 PDE4DQ08499 809 aa8.16□□□□□ -1.1
PCM1-214ENST00000521338 HELBQ8NG08 1087 aaPredicted RBP8.16□□□□□ -1.1
PCM1-214ENST00000521338 SLURP2P0DP57 97 aa8.15□□□□□ -1.1
PCM1-214ENST00000521338 WHAMMQ8TF30 809 aa8.15□□□□□ -1.1
PCM1-214ENST00000521338 PGPEP1Q9NXJ5 209 aa8.15□□□□□ -1.1
PCM1-214ENST00000521338 ARHGEF15O94989 841 aa8.14□□□□□ -1.11
PCM1-214ENST00000521338 CTDSPL2Q05D32 466 aa8.14□□□□□ -1.11
PCM1-214ENST00000521338 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
PCM1-214ENST00000521338 CTSOP43234 321 aaPredicted RBP8.13□□□□□ -1.11
PCM1-214ENST00000521338 CLK2P49760 499 aaKnown RBP8.13□□□□□ -1.11
PCM1-214ENST00000521338 KCTD15Q96SI1 283 aaPredicted RBP8.13□□□□□ -1.11
PCM1-214ENST00000521338 OCSTAMPQ9BR26 566 aa8.13□□□□□ -1.11
PCM1-214ENST00000521338 ITGA6P23229 1130 aa8.12□□□□□ -1.11
PCM1-214ENST00000521338 VWA5B2Q8N398 1253 aa8.12□□□□□ -1.11
PCM1-214ENST00000521338 AGBL1Q96MI9 1066 aa8.12□□□□□ -1.11
PCM1-214ENST00000521338 SENP3-EIF4A1A0A087X0R7 540 aa8.11□□□□□ -1.11
PCM1-214ENST00000521338 FBXO31Q5XUX0 539 aaPredicted RBP8.11□□□□□ -1.11
PCM1-214ENST00000521338 RNF225M0QZC1 329 aaPredicted RBP8.1□□□□□ -1.11
PCM1-214ENST00000521338 INTS6LQ5JSJ4 861 aaKnown RBP8.1□□□□□ -1.11
PCM1-214ENST00000521338 LRRN4Q8WUT4 740 aa8.1□□□□□ -1.11
PCM1-214ENST00000521338 INSM2Q96T92 566 aaPredicted RBP8.1□□□□□ -1.11
PCM1-214ENST00000521338 ARHGAP9Q9BRR9 750 aa8.1□□□□□ -1.11
PCM1-214ENST00000521338 POLR3EQ9NVU0 708 aa8.1□□□□□ -1.11
PCM1-214ENST00000521338 FKBPLQ9UIM3 349 aa8.1□□□□□ -1.11
PCM1-214ENST00000521338 CDV3Q9UKY7 258 aaKnown RBP8.1□□□□□ -1.11
PCM1-214ENST00000521338 SVOPQ8N4V2 548 aa8.09□□□□□ -1.11
PCM1-214ENST00000521338 RNF217Q8TC41 542 aa8.09□□□□□ -1.11
PCM1-214ENST00000521338 DHX9Q08211 1270 aaKnown RBP8.08□□□□□ -1.12
PCM1-214ENST00000521338 SV2AQ7L0J3 742 aa8.08□□□□□ -1.12
PCM1-214ENST00000521338 KDF1Q8NAX2 398 aaPredicted RBP8.08□□□□□ -1.12
PCM1-214ENST00000521338 SLC10A4Q96EP9 437 aa8.08□□□□□ -1.12
PCM1-214ENST00000521338 RELBQ01201 579 aa8.07□□□□□ -1.12
PCM1-214ENST00000521338 NR6A1Q15406 480 aa8.07□□□□□ -1.12
PCM1-214ENST00000521338 RSPH6AQ9H0K4 717 aa8.07□□□□□ -1.12
PCM1-214ENST00000521338 ZC3H4Q9UPT8 1303 aaKnown RBP8.06□□□□□ -1.12
PCM1-214ENST00000521338 IRS1P35568 1242 aa8.06□□□□□ -1.12
PCM1-214ENST00000521338 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
PCM1-214ENST00000521338 ZNF395Q9H8N7 513 aaPredicted RBP8.06□□□□□ -1.12
PCM1-214ENST00000521338 TMPRSS4Q9NRS4 437 aa8.06□□□□□ -1.12
PCM1-214ENST00000521338 DNMT3AQ9Y6K1 912 aaPredicted RBP8.06□□□□□ -1.12
PCM1-214ENST00000521338 CDC14CA4D256 554 aa8.05□□□□□ -1.12
PCM1-214ENST00000521338 LILRA1O75019 489 aa8.05□□□□□ -1.12
PCM1-214ENST00000521338 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
PCM1-214ENST00000521338 SLC24A3Q9HC58 644 aa8.05□□□□□ -1.12
PCM1-214ENST00000521338 ADD1P35611 737 aaKnown RBP8.04□□□□□ -1.12
PCM1-214ENST00000521338 GAS6Q14393 721 aa8.04□□□□□ -1.12
PCM1-214ENST00000521338 LYPD4Q6UWN0 246 aa8.04□□□□□ -1.12
PCM1-214ENST00000521338 ADAM32Q8TC27 787 aa8.04□□□□□ -1.12
PCM1-214ENST00000521338 CUEDC1Q9NWM3 386 aaPredicted RBP8.04□□□□□ -1.12
PCM1-214ENST00000521338 GPSM3Q9Y4H4 160 aa8.04□□□□□ -1.12
PCM1-214ENST00000521338 ADAMTS2O95450 1211 aa8.03□□□□□ -1.12
PCM1-214ENST00000521338 ZNF784Q8NCA9 323 aaPredicted RBP8.03□□□□□ -1.12
PCM1-214ENST00000521338 POLMQ9NP87 494 aaPredicted RBP8.03□□□□□ -1.12
PCM1-214ENST00000521338 PTK2Q05397 1052 aa8.02□□□□□ -1.13
PCM1-214ENST00000521338 PPP2R2DQ66LE6 453 aa8.02□□□□□ -1.13
PCM1-214ENST00000521338 GPAT2Q6NUI2 795 aa8.02□□□□□ -1.13
PCM1-214ENST00000521338 KANK3Q6NY19 840 aa8.02□□□□□ -1.13
PCM1-214ENST00000521338 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.02□□□□□ -1.13
PCM1-214ENST00000521338 IGHA1P01876 353 aa8.01□□□□□ -1.13
PCM1-214ENST00000521338 ADH1AP07327 375 aa8.01□□□□□ -1.13
PCM1-214ENST00000521338 PTGIRP43119 386 aa8.01□□□□□ -1.13
PCM1-214ENST00000521338 SRSF11Q05519 484 aaKnown RBP8.01□□□□□ -1.13
PCM1-214ENST00000521338 EPS8L1Q8TE68 723 aa8.01□□□□□ -1.13
PCM1-214ENST00000521338 ESPNB1AK53 854 aa8□□□□□ -1.13
PCM1-214ENST00000521338 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
PCM1-214ENST00000521338 CELA2BP08218 269 aaPredicted RBP8□□□□□ -1.13
PCM1-214ENST00000521338 SKIV2LQ15477 1246 aaKnown RBP8□□□□□ -1.13
PCM1-214ENST00000521338 PROCA1Q8NCQ7 364 aaPredicted RBP8□□□□□ -1.13
PCM1-214ENST00000521338 MARSP56192 900 aaKnown RBP7.99□□□□□ -1.13
PCM1-214ENST00000521338 SCARF2Q96GP6 870 aaPredicted RBP7.99□□□□□ -1.13
PCM1-214ENST00000521338 FOXK2Q01167 660 aa7.98□□□□□ -1.13
PCM1-214ENST00000521338 NBPF20Q3BBV1 942 aa7.98□□□□□ -1.13
PCM1-214ENST00000521338 SH3D19Q5HYK7 790 aa7.97□□□□□ -1.13
PCM1-214ENST00000521338 LYSMD3Q7Z3D4 306 aa7.97□□□□□ -1.13
PCM1-214ENST00000521338 HMX1Q9NP08 348 aaPredicted RBP7.97□□□□□ -1.13
PCM1-214ENST00000521338 ITGB2P05107 769 aa7.96□□□□□ -1.14
PCM1-214ENST00000521338 RNF144AP50876 292 aaPredicted RBP7.96□□□□□ -1.14
PCM1-214ENST00000521338 RAB15P59190 212 aa7.96□□□□□ -1.14
PCM1-214ENST00000521338 ZNF837Q96EG3 531 aaPredicted RBP7.95□□□□□ -1.14
PCM1-214ENST00000521338 AP1G2O75843 785 aa7.94□□□□□ -1.14
PCM1-214ENST00000521338 PRICKLE2Q7Z3G6 844 aa7.94□□□□□ -1.14
PCM1-214ENST00000521338 RHOQP17081 205 aa7.93□□□□□ -1.14
PCM1-214ENST00000521338 MAP3K10Q02779 954 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms